prot_H-paniculata_contig4917.12090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4917.12090.1
Unique Nameprot_H-paniculata_contig4917.12090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5JPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ2_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.970e-41
Identity = 76/191 (39.79%), Postives = 119/191 (62.30%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P LP+ Y++  F L  ++D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ +Y+SN
Sbjct:   13 IDVQRDYKQGTLVISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYLFFLARGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISN 202          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.760e-40
Identity = 76/189 (40.21%), Postives = 117/189 (61.90%), Query Frame = 0
Query:    3 IPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            + R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P LP+ Y++  F L  ++D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ +Y+SN
Sbjct:   97 VQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISN 284          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 4.980e-39
Identity = 84/195 (43.08%), Postives = 130/195 (66.67%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASGKVMHQTADDN-QLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEET-RKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSNLHS 193
            MEI  +++ G + +SQ+KYV++IL ++ M +  PA +P SG  + Q  ++   L E+  K YQ IVGS +FLT  TR++I Y+V    R M+KP   +M+  KR+LRYLR  PD+P+K+R+  ++L  Y DAS  G+ E  +K+S++G IF LA G+V  +S+LQ++ A SS  AE++A+AT A++ IYL  + S
Sbjct:  426 MEI--SQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLS 618          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.380e-38
Identity = 76/191 (39.79%), Postives = 119/191 (62.30%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P LP+ Y++  F L  ++D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ +Y+SN
Sbjct:  422 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISN 611          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.710e-38
Identity = 76/191 (39.79%), Postives = 119/191 (62.30%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P LP+ Y++  F L  ++D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ +Y+SN
Sbjct:  578 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISN 767          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5L5K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K4_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.610e-38
Identity = 75/191 (39.27%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K Y+++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P LP+ Y++  F L  ++D+S G   +  + ST+G  FFLA GL+ + +  Q   A S+ EAE+ AL+  A++ +Y+SN
Sbjct:   54 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYRSMTGSILYLAQCTRFDLSYAALQNSKACSNPAQVNMTAAKHVLRYLRGNPFLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYPFFLAGGLISYGAKTQTRTAQSTVEAEIQALSYSAREAVYISN 243          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 6.120e-38
Identity = 72/187 (38.50%), Postives = 114/187 (60.96%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGI 186
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P LP+ Y++  F L  ++D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ E E+ AL+  A++ +
Sbjct:   95 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYLFFLAGGLISYGAKTQTLTAQSTVETEIQALSYLAREAV 280          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5K4S5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.290e-36
Identity = 76/208 (36.54%), Postives = 119/208 (57.21%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPD-----------------LPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRYLR  P                  LP+ Y++  F L  ++D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ +Y+SN
Sbjct:   37 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVXXXXXXXXXXXXXXXSVLPIVYKRGQFRLAAFTDSSFGANPDNGR-STTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISN 243          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.580e-34
Identity = 74/191 (38.74%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +P  G ++      D  L     K YQ++ GS ++L QCTRFD+ Y+  Q ++  S P Q NM A K +LRY R  P LP+  ++ +F LV  + +S G      + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ +Y+SN
Sbjct:  621 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYRRGNPVLPIVSKRGHFRLVALTGSSFGANPGNGR-STTGYLFFLAGGLISYGAKTQTLSAHSTVEAEIQALSYSAREAVYISN 810          
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.760e-34
Identity = 74/191 (38.74%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    1 MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASG-KVMHQTADDNQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIAVKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFFLASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSN 190
            +++ R+   GTL +SQ  YV ++L++FGM+EANP  +   G ++      D  L     K YQ++  S ++L QCTRFD+ Y+  Q ++  S P Q N+ A K +LRYLR  P LP+ Y++  F L   +D+S G   +  + ST+G +FFLA GL+ + +  Q + A S+ EAE+ AL+  A++ IY+SN
Sbjct:  314 IDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGR-STTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYISN 503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4917.12090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPQ2_9PHAE1.970e-4139.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUJ3_9PHAE2.760e-4040.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J897_9PHAE4.980e-3943.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF89_9PHAE2.380e-3839.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE3.710e-3839.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5K4_9PHAE5.610e-3839.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAK0_9PHAE6.120e-3838.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S5_9PHAE2.290e-3636.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K7T8_9PHAE1.580e-3438.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JDU8_9PHAE1.760e-3438.74Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 19..190
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 19..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4917contigH-paniculata_contig4917:2749..3336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4917.12090.1mRNA_H-paniculata_contig4917.12090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4917 2749..3348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4917.12090.1 ID=prot_H-paniculata_contig4917.12090.1|Name=mRNA_H-paniculata_contig4917.12090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MEIPRNKTSGTLELSQNKYVLSILKQFGMEEANPAKSPASGKVMHQTADD
NQLDEQGTKQYQAIVGSPIFLTQCTRFDICYSVSQAARFMSKPFQDNMIA
VKRILRYLRWQPDLPVKYRKNNFELVRYSDASHGGTEETRKKSTSGSIFF
LASGLVHFSSSLQRIIATSSTEAELLALATCAKQGIYLSNLHSTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like