prot_H-paniculata_contig4912.12086.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4912.12086.1
Unique Nameprot_H-paniculata_contig4912.12086.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length352
Homology
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BLAST of mRNA_H-paniculata_contig4912.12086.1 vs. uniprot
Match: D8LPV7_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPV7_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.270e-105
Identity = 169/294 (57.48%), Postives = 210/294 (71.43%), Query Frame = 0 
Query:    1 MRRSWHFRLPNPSRGRREEVHKIQLRHYPLTGQSN--VTVDGVEVDAMQGVPRTKG-----SCTLQIQVGTHDCCVGYRAAPRPGRYYYSLVVDGVVVPELNETVGDGGETDADSIPRPTDVFVDEVGSAKDRQVFGSEFLEFRVVTRRGGRIRRAFLGGIRGPNHGGSDSNGNFGGIEARRNNSSSGGSGESFAVVWRRFTAFRQLHYDITAVLRGSHHMIESLPPLPAKCVNPLVNQMGAPFVETRKAGLQAYLRKILEVPKARTSVNMMGFLGLHPVTGAPLPWAAISPST 287
            M R+WH RLP+PSRGRREEVHK+QLRH+PLTG S+  VTVDG+ V   +  P   G     + TL+++VG+HDC VGYRA+ RPGRY+YS ++DGVV+PELN+TVGD G  D + +P P +VF+D +  AKDR  FG+EFLEFRVVT RG R R +                    G             G   AVVWRRF+AFR LH D+TA+L GSH +++SLPPLPAKC+NPLVNQMGA F+E+R+  LQAYLR++LEVPKAR SVN+MGFLGLHP+TG PLPWAA++PST
Sbjct:   12 MVRTWHMRLPDPSRGRREEVHKVQLRHFPLTGHSSRSVTVDGIAVQGAESAPPPGGGSLKKTVTLKVRVGSHDCWVGYRASARPGRYFYSCIIDGVVMPELNDTVGDTG--DDEGVPLPGEVFIDSIEPAKDR--FGTEFLEFRVVTLRGTRRRDSC-------------------GXXXXXXXXXXXXXGCYHAVVWRRFSAFRSLHSDVTAMLWGSH-LLDSLPPLPAKCINPLVNQMGAAFLESRREVLQAYLRRLLEVPKARASVNLMGFLGLHPITGYPLPWAALAPST 281
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BLAST of mRNA_H-paniculata_contig4912.12086.1 vs. uniprot
Match: A0A6U1LL59_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LL59_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.810e-7
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 0 
Query:  189 VVWRRFTAFRQLHYDITAVLRGSHHMIESLPPLPAKCVNPLVNQMGAPFVETRKAGLQAYLRKILEVPKARTSVNMMGFLGL 270
            VV RRF+ F +L   I +     HH+  +LP LPAK +  +++     FVE R+  L+AYL+++++VP A ++ ++  FLG+
Sbjct:   19 VVTRRFSDFDRLDNHIKSAF-WRHHLRSNLPCLPAKKIKYVIDHSQTDFVEQRRLDLEAYLKRLVQVPHASSNPDLHQFLGI 99
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BLAST of mRNA_H-paniculata_contig4912.12086.1 vs. uniprot
Match: A0A7S2RHW7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RHW7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.030e-7
Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 0 
Query:  189 VVWRRFTAFRQLHYDITAVLRGSHHMIESLPPLPAKCVNPLVNQMGAPFVETRKAGLQAYLRKILEVPKARTSVNMMGFLGLHP---VTGAP 277
             V +RF+ F +L   + +   GSH ++ S+PPLP+K     V  +   F+ETR+ GL  YLRK+L +P+   + +++ FL + P   V+ AP
Sbjct:  220 TVDKRFSQFVELDRLVRSAFSGSH-LLSSIPPLPSKLPKTFVKHLSPDFIETRRFGLDTYLRKLLALPRIPQNPDVLEFLKILPPVAVSNAP 310
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4912.12086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPV7_ECTSI1.270e-10557.48PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6U1LL59_9STRA4.810e-736.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RHW7_9STRA5.030e-735.87Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 185..268
e-value: 1.5E-7
score: 31.3
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 114..275
score: 10.564
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 119..274
e-value: 3.2E-13
score: 51.5
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 184..271
IPR038513FAIM1 domain superfamilyGENE3D2.40.128.180coord: 14..93
e-value: 4.6E-5
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4912contigH-paniculata_contig4912:5387..14776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4912.12086.1mRNA_H-paniculata_contig4912.12086.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4912 3934..14776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4912.12086.1 ID=prot_H-paniculata_contig4912.12086.1|Name=mRNA_H-paniculata_contig4912.12086.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=352bp
MRRSWHFRLPNPSRGRREEVHKIQLRHYPLTGQSNVTVDGVEVDAMQGVP
RTKGSCTLQIQVGTHDCCVGYRAAPRPGRYYYSLVVDGVVVPELNETVGD
GGETDADSIPRPTDVFVDEVGSAKDRQVFGSEFLEFRVVTRRGGRIRRAF
LGGIRGPNHGGSDSNGNFGGIEARRNNSSSGGSGESFAVVWRRFTAFRQL
HYDITAVLRGSHHMIESLPPLPAKCVNPLVNQMGAPFVETRKAGLQAYLR
KILEVPKARTSVNMMGFLGLHPVTGAPLPWAAISPSTTTPSVSGSSSSSS
GTDPHQQPQQKATVWSEEASTAATPAASAVTAQEKRRAILGSASGVSGVG
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf
IPR038513FAIM1_dom_sf