prot_H-paniculata_contig4910.12079.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4910.12079.1
Unique Nameprot_H-paniculata_contig4910.12079.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length197
Homology
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BLAST of mRNA_H-paniculata_contig4910.12079.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 7.600e-18
Identity = 59/126 (46.83%), Postives = 73/126 (57.94%), Query Frame = 0 
Query:    1 ITGQGESRLQRLLELWGDGRARVRACAVRSLSALAGGIIVADGSHYAAAAPTAPGSSGMASTMSMIDRCGGLLRRCFRGILFESDDNVRAHTAQLWKRLLPELQKID-NPSATYAALAKACLEHLF 125
                GE RL RLL+LW D RA VRACAVRSL ALA GI+   G+        + G S  A+T     RC  LL RCF+ +L E DD VR H+A+LW  LL  L + D +  A +A+L  +CL  LF
Sbjct:  582 FLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIV---GATRPVTKTQSVGESAAAAT-----RCERLLLRCFQALLSERDDGVREHSARLWSELLKGLGRADGHRRAAHASLMASCLGILF 699
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BLAST of mRNA_H-paniculata_contig4910.12079.1 vs. uniprot
Match: A0A6H5J7D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D4_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.520e-17
Identity = 61/136 (44.85%), Postives = 76/136 (55.88%), Query Frame = 0 
Query:    1 ITGQGESRLQRLLELWGDGRARVRACAVRSLSALAGGIIVADGSHYAAAAPTAPGSSGMASTMSMIDRCGGLLRRCFRGILFESDDNVRAHTAQLWKRLLPELQKID-NPSATYAALAKACLEHLFDTDPTAAAPT 135
                GE RL RLL+LW D RA VRACAVRSL ALA GI+   G+    A   + G S  A++      C  LL RCF+ +L E DD VR H+A+LW  LL  L + D +  A +A+L  +CL  LF    T   PT
Sbjct:  204 FLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIV---GATRPVAKTQSAGESAAATS------CERLLLRCFQALLSERDDGVREHSARLWSELLKGLGRADGHRGAAHASLMASCLGVLFTPPATRPPPT 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4910.12079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBB5_ECTSI7.600e-1846.83Essential abundant protein involved in regulation ... [more]
A0A6H5J7D4_9PHAE1.520e-1744.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4910contigH-paniculata_contig4910:11453..12518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4910.12079.1mRNA_H-paniculata_contig4910.12079.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4910 11452..12518 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4910.12079.1 ID=prot_H-paniculata_contig4910.12079.1|Name=mRNA_H-paniculata_contig4910.12079.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
ITGQGESRLQRLLELWGDGRARVRACAVRSLSALAGGIIVADGSHYAAAA
PTAPGSSGMASTMSMIDRCGGLLRRCFRGILFESDDNVRAHTAQLWKRLL
PELQKIDNPSATYAALAKACLEHLFDTDPTAAAPTDDPPTGPQPRPSSST
AHPSVSLTPQSPTTTAEKAKASTARSSRTPPVAAATAAMTPPPPRKR
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