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Homology
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: D8LM32_ECTSI (Dolichol phosphate-mannose biosynthesis regulatory protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM32_ECTSI) HSP 1 Score: 130 bits (328), Expect = 3.410e-33 Identity = 68/85 (80.00%), Postives = 80/85 (94.12%), Query Frame = 2
Query: 83 MAVSSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQKAS 337
MAVSSD+L+G+ L +S+T+FVYYTLWVIVLPFVDTSHPVQ +FLPRKYAIAIPTVLVI+L+TLVATF+GLTL+KSARKQK K+S
Sbjct: 1 MAVSSDKLVGSGLLLVSVTIFVYYTLWVIVLPFVDTSHPVQDFFLPRKYAIAIPTVLVILLVTLVATFIGLTLMKSARKQKLKSS 85
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: T0R3L5_SAPDV (Dolichol phosphate-mannose biosynthesis regulatory protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0R3L5_SAPDV) HSP 1 Score: 85.5 bits (210), Expect = 7.920e-17 Identity = 41/82 (50.00%), Postives = 61/82 (74.39%), Query Frame = 2
Query: 83 MAVSSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQ 328
M SSDQ +GA L ++S+++F YYTLWVI+ PFVD H VQ +F R YAIAIP +L++I +T+ +TF+GL ++KS +++
Sbjct: 1 MGASSDQTVGAILLAISVSMFAYYTLWVIITPFVDKDHVVQGFFPDRHYAIAIPAILLVIFLTICSTFIGLVMIKSKHTKEE 82
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: A0A162PY78_PHYB8 (Dolichol phosphate-mannose biosynthesis regulatory protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162PY78_PHYB8) HSP 1 Score: 83.2 bits (204), Expect = 5.630e-16 Identity = 39/84 (46.43%), Postives = 61/84 (72.62%), Query Frame = 2
Query: 83 MAVSSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQKA 334
M +D+ +GA F S+ +F YYT+W +++PFVD HP++ YFLP +YAI IP +++I+ +T++ TF+GL +VKS KQ +KA
Sbjct: 1 MGTGTDKAVGAVAFFASVAIFTYYTIWSLLMPFVDEGHPLRNYFLPWEYAIRIPLIILIVGLTVIFTFLGLVMVKSKNKQDKKA 84
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: A0A1Y1IIY2_KLENI (Dolichol phosphate-mannose biosynthesis regulatory protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IIY2_KLENI) HSP 1 Score: 82.4 bits (202), Expect = 9.420e-16 Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 2
Query: 95 SDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQKA 334
+DQL G L SI+VFVYYTLWVIVLPFVD+ H V YFLP++YAIA+P +++L++ + F+G+ +V+S +K+KA
Sbjct: 2 NDQLAGLGLLLFSISVFVYYTLWVIVLPFVDSDHAVHSYFLPQEYAIALPVGALVLLLSFLLLFLGILMVRSRLGKKKKA 81
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: A0A6A3T4G2_9STRA (Dolichol phosphate-mannose biosynthesis regulatory protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T4G2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 9.680e-16 Identity = 38/78 (48.72%), Postives = 60/78 (76.92%), Query Frame = 2
Query: 92 SSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQK 325
+SD+++G L ++S+ VFVYY++WV++ PF+D H VQ +FLP YAI IP VL+++L T ATF+G+ ++KS +K+K
Sbjct: 3 ASDKVVGLVLLAISVVVFVYYSIWVLLTPFIDEGHVVQQFFLPYHYAITIPAVLLVLLFTGAATFIGMVMIKSQKKKK 80
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: A0A8K1CUP8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUP8_PYTOL) HSP 1 Score: 82.4 bits (202), Expect = 9.680e-16 Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = 2
Query: 92 SSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQ 328
+SD+L+G L +SI V+VYYT+WVI+ PF+D H +Q +FLP YAIAIP +L+++L + ATF+GL +++S K+K+
Sbjct: 3 ASDKLVGTVLLLISIAVYVYYTVWVILTPFIDQDHAIQRFFLPYHYAIAIPALLIVLLFSGAATFIGLVMIRSKNKKKK 81
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: D3B024_POLPP (Dolichol phosphate-mannose biosynthesis regulatory protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B024_POLPP) HSP 1 Score: 82.0 bits (201), Expect = 1.190e-15 Identity = 40/75 (53.33%), Postives = 57/75 (76.00%), Query Frame = 2
Query: 95 SDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARK 319
+D+ +G SL SITVFVYYT WVI+ PF+D+ H + YFLPR+Y I IP +LV++ +T++ TF+GL +VKS +K
Sbjct: 4 TDRCIGLSLLLFSITVFVYYTAWVILSPFIDSDHWIHQYFLPREYGIIIPLMLVVVGLTVIGTFLGLVMVKSKKK 78
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: A0A5E8BZB4_9ASCO (Dolichol phosphate-mannose biosynthesis regulatory protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZB4_9ASCO) HSP 1 Score: 82.0 bits (201), Expect = 1.560e-15 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 2
Query: 89 VSSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQK 331
+S D+L+GA++ ++ VF+YYT+W VLPFVD S P+Q FLPR++AI IP VL++ + V TF+G L+K+A K+K+K
Sbjct: 1 MSFDKLIGAAMIFVATAVFIYYTIWTFVLPFVDESSPIQSLFLPREWAIRIPVVLLLTAVAGVGTFIGKVLIKNAEKEKRK 81
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: H3HBK0_PHYRM (Dolichol phosphate-mannose biosynthesis regulatory protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3HBK0_PHYRM) HSP 1 Score: 81.6 bits (200), Expect = 1.810e-15 Identity = 36/78 (46.15%), Postives = 60/78 (76.92%), Query Frame = 2
Query: 92 SSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQK 325
+SD+ +G L ++S+ V+VYY++WV++ PF+D HP+Q +FLP YAI+IP VL+++L + ATF+G+ ++KS +K K
Sbjct: 3 ASDKTVGLVLLAISVVVYVYYSIWVLLTPFIDEDHPIQQFFLPYHYAISIPAVLLVLLFSGAATFIGMVMIKSQKKTK 80
BLAST of mRNA_H-paniculata_contig1189.1207.1 vs. uniprot
Match: A0A2D4C8D2_PYTIN (Dolichol phosphate-mannose biosynthesis regulatory protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8D2_PYTIN) HSP 1 Score: 81.6 bits (200), Expect = 1.810e-15 Identity = 39/78 (50.00%), Postives = 59/78 (75.64%), Query Frame = 2
Query: 95 SDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYAIAIPTVLVIILITLVATFVGLTLVKSARKQKQ 328
SD+L+G+ L +S+ V+VYYT WVIV PFVD HP Q +FLP +YAIAIP +L+++L T A+F+G+ +++S +K+
Sbjct: 4 SDKLVGSVLLLISVVVYVYYTAWVIVTPFVDQHHPFQRFFLPYQYAIAIPAILLVLLFTGAASFIGMVMIRSKNAKKK 81
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 129.0 |
| Seed ortholog evalue | 1e-27 |
| Seed eggNOG ortholog | 2880.D8LM32 |
| Preferred name | DPM2 |
| KEGG rclass | RC00005 |
| KEGG ko | ko:K09658 |
| KEGG Reaction | R01009,R05916 |
| KEGG Pathway | ko00510,ko00563,ko01100,map00510,map00563,map01100 |
| Hectar predicted targeting category | signal anchor |
| GOs | GO:0000030,GO:0000506,GO:0003674,GO:0003824,GO:0004582,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006464,GO:0006486,GO:0006487,GO:0006493,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006720,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016093,GO:0016254,GO:0016740,GO:0016757,GO:0016758,GO:0019348,GO:0019538,GO:0019637,GO:0030234,GO:0031224,GO:0031501,GO:0031647,GO:0031984,GO:0032991,GO:0033185,GO:0034645,GO:0035268,GO:0035269,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0048471,GO:0050790,GO:0065007,GO:0065008,GO:0065009,GO:0070085,GO:0071704,GO:0090407,GO:0097502,GO:0097713,GO:0098772,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1902494,GO:1903509,GO:1990234 |
| EggNOG free text desc. | dolichol metabolic process |
| EggNOG OGs | KOG3488@1,KOG3488@2759 |
| Ec32 ortholog description | Dolichol phosphate-mannose biosynthesis regulatory protein |
| Ec32 ortholog | Ec-14_002700.1 |
| COG Functional cat. | T |
| CAZy | GT2 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001 |
| Exons | 3 |
| Model size | 1571 |
| Cds size | 258 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1189.1207.1 >prot_H-paniculata_contig1189.1207.1 ID=prot_H-paniculata_contig1189.1207.1|Name=mRNA_H-paniculata_contig1189.1207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MAVSSDQLLGASLFSLSITVFVYYTLWVIVLPFVDTSHPVQVYFLPRKYA
IAIPTVLVIILITLVATFVGLTLVKSARKQKQKAS* back to topmRNA from alignment at H-paniculata_contig1189:2..11259- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1189.1207.1 ID=mRNA_H-paniculata_contig1189.1207.1|Name=mRNA_H-paniculata_contig1189.1207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11258bp|location=Sequence derived from alignment at H-paniculata_contig1189:2..11259- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGACGCTAGGCACGAGGCTGTAGGCTAGAGGATTACGGCTCTGTTTGT
AGCTTCGAGCTGATTCTTCCGCTCGAGGTCCCATGGTGAGTGAAATTCCA
AGAGGTTTGCTTTGTTGAACCAAACAAAAATTGTACAAGTATTAATACTC
GCGTGTTGTTCAGGGTTTATCATCGATGTGAAGCGTGTGTTTCAAATGTT
CTTTGATGCGCTGATAATTTTGGTGCTTCGTCCATGAGTGGGAGAGGGCG
TCGTTTTCGCCCCATCTGACTGTACTGTAAGCATAGTATTTATGCTCGCG
TGGAATAGGTCACCGTGCATTTAGCTTGAACTTTTTGAAATTGAAATTGT
TGTAATATGCGTCACCCCCGGTTTATAATTTGCAATGAATGCGGTCTAAT
ATTTCCGTTGACTTTCAAACGCCTATTGCACAGCGTCCTAATGAAGATCC
TGATCCTGAAACAAGGCAATGTAACCGTCCCTTGTGTGTGAATCTTCCAC
ACATCCAACGTCTAATCATTCCTCTGAAGCGACTGATGACTAATTAGACG
GGGGTACCCCTTATCGTGACAATCTCAACCCCTGACAGGTGTCGAGCTGA
AGACAGGATTGGGTGTAACGTACAACACCCATGCATACACACTGTCTGAA
AGCGTAAAATATAGAGCTCTACATAGGGTTGGGAAGACAAGAAGCTTCGT
TTTCCATGAGGGCTGGGGTTGTAATTAGTCGCGTTTCAGACCACTAAGCA
GCCGTTAGATCGGTTCCTATCTAATAATCTGATCGCTGTAAAATCATAAA
ATCTAAATTCTCACCTGAAAAGTACCCACGGGGGAAAAAAGTACGGAATT
TTCTTGTATAGACGTCAAATGAATACAGGGATTCAGAGCTGGCGTTTTTC
AGACAGCCTCAGACAATCACTACAGACAGCAAACACAGGAATAGCATCGT
TCCGCGTACTTCGACTGCTAGCTCGATAGGTCAATAAATTTGGAACGCGA
AGCGTCAACCACACGCTGAGTGAAATTCACACCTGTGTTGCAACCCATAT
GAACCAGAAAATATATACATCCACAAAATACAGCCTCCTATTGAAGCGGG
TAGGGGATATGACTTTGGTCATCATCCAGAGCGTAGCCTCCAAAATCCAT
CCGTACGTTTGGCATCATATTGTGGCGTCGCCAGACGCCCCTACAGCTCC
CCAAGCAAGGGATACGCACCAGAGAGACGAGGGGAGGTATCACCCCGACC
GGTTGATAAATTGGGGCAGAAAATTAGTCGAGGGTCAAGAAGTCAGGCAT
CCTGTAGTCGAAACTTGAATTCCAGCGATGCAGCAGCGCCTGGACGGTGC
TGCAGATTACCCGTTACTTACACCCGGGGCGAAAGCTGAAGATGAAATGG
GTTTGCACAACAATGGCACTTAACGATAGCCCAAGTCAGTCGAAGGCTAT
GTGACCATGCCGAATTGTGGATCGCGTAAAATAGCGTTGATATCCAGGTG
GCTGTGAACATTTCATGTGGAGTTTGGCTTTGCAGATGATTTGAATCCTG
GCAAAAATGTATAGAAAAATGTGTTAAGTCGCAAATTGTCTATACAGCTC
TGACTGTAAAGGATGGTCTATAGTGACGTGCATTTCTGACAGAACACCCG
TGCTGTTACTGGGTGTATTTTTCCTGTACATCAGCATTATTTTCATGCTC
TATAGACTTTGAACCCGAGGCGAACGCCGAAATTTATCCAATTCAGACTG
TCAGTGATCAGATAGGTCGCTGTCCATGTGTCATACGTAGATGGTGCCTG
GAATTAGTGATTTTCCTATAGCAAAAATGGGGGGAATTGTCGTTTTTTTG
GGAGAATCTCGTTACATGTCTCTATCAATATCGACATCATCCTGCGGTTT
TGCAACACAGGTGATCGGCAGTGTGTGTGGCCGATGAAGCGCACAACGTC
ACGACATCACATCAACCTAGAATAATAACCACGTCCTCACGGAAGATATC
ATGGTTATTTATGAACACCATGCTCAAAGGCTATTTATTGATGACAAATG
TTGCAGATGCACACGCTCACGCACCATGCAGCCGGTCCATATTGGTTGCT
CTTCTTCTGAGATACCGTTATATCCTCATTCGATCCTTAGGCGACCTTGA
GTCGACCCCACTCTAGCGCCGAAGAGAATTACCTAGTTGGAGAATATTTT
CCGATCGTTGAACAAAACAAGTCAGCTCATGCACGGGACTAAACACGTTT
ATGATTGGCCGTGTAGATGAAAAATCGTATGTGATTAACGGGAACCCGTG
TTTTCCCTGAAAAACTCCAGGTGGCACTCCAGCACCATGCGGCCAAAACC
CTTTGCCTTAGAAGAAACGACTCTATCCCTGCCCCCCCTTTCGCTCCGGG
ATAGTCAGGTGTCTATTTTGTTCTGAGTCCGCGCCCGGCGCTTTGGGCGT
ATACCCACGAAATGTGCAATGAGCATATTCTGCTGTAATCCGGTTCGCTT
GACAGTTTGGGTCATCTTGGATACCGTAAAAGTTGACGTCTGATTTCGTC
AGCGTTGTAAGCTAACCATGCAGTGCACGAAGTCGTGCTATTGAGAGACA
CACTCCCCTATCACCCATGTACTCCCGGGAAATACATGGCACGTACAAGC
GAAGCTAGTATATTTGCATGACAGAGGGGTACATGAGTATGTACTAGCGA
GTACAAAGAGTAACCTAGGCTAGTTTAACGTTTGCGTTCTAGGCCGCCGT
GCGCGCCAGAATGGCATCTATCGAGGGACTGCCTTTCCCGCGCGGATCTT
CTTGCGACCAATGCCTTTGTTCTCCTCAATAGTTCGGCAGGTGTTCGTGT
ATAATTTGTCTGGGTTGGTTCGCTGACTGTGGGTGTCTGTGTCGAGGTTG
TTGTTGATCGTCGGTTCGGGGTGTCGACTGTCGCTGCGGCGTGGGGCTAC
GTAGTTTGCCTACTTGGGTTACCCAGCTGCTGCCATGTCTGGCTGGGGAA
TCGTGGCAAGCTGTGTATTCTTCTGTACACCGTGTGCCGAGCACATACAA
ACAAGCTCGAGGCGAATCCTTACGGCTACTCTGTGTGGCACGCCCTTTTG
GGTTAGCAACTGTATCTGCATGTGCACATACATACATGCAAAACACGGAG
AGAAGAATACCAGATGCCAAGTTGTGTAATCCAGTGGACTCTACCTCTGC
TAGCGCATGCCATACCCCATTGCTTGAGGGTTATTAGGGTTATATACGGA
CTTTCCCTGTGAATATGAACATTTTATGTGTTCGTGTGTTCTATCAGCTG
TGTGACACATTCCACCCTTTCTTCCTTACTCTCTTGCCGCTTTTTCTCCA
CATATCTACGCACTTTTTATGCCTTTCACCCTCGACTTACCCTTCTGTCG
ACAATCGTTTCACGGTCGTTGGATATTCTGCGGACGGCCGAATGGCCGGC
TGCGGTCTTCATTACGTTCGGCAGGATCATACCAAGTTCGTTCGTGCGTA
TGATATACTCATGATATGATTTCATCGCGACAAGACATGCATTGCGCTAC
ACCACTGGCATGCATTATAACTCTGCCGTGAAGTTATGGTAGATGCGCAG
CAGCATGCATGTACACAGAGCGCAGCTCACCGCTGAGCTATTCAATAGGA
AAGAAGCAGCAGGACACAGTATATATTACTTGATGTTGTGACTTCTTCGT
AACTATCTTGCAGCATCATGGCACGTACTGTCTGTCGATTACCTGTACTG
TTGCTATAACTGTATGTATATATATATATATATATATATATATCGGAAGC
CGGCAGTGGGACGAAAGCAGATTTTGTTCTTCTCTTGTCTCAGTAGTATT
GATAGGTACGTCTAAACACACCAGCTGTGGTTTAGAATGTACCGAAAAGA
GTCGAAAATGGGACAAACGAACACTTTTTTGCATTGCAAGAAGCTCACAA
ACAAAACTACGCGGTACAGCCAGCACCGGTGCGGAAGCGCACAGAGACCA
CTCTCTGCACTCGATCACACCTTAGCAAGCATTGACGTGGAGGTATACAC
AACAAACAGGGTCTGCACACCGAACTCACAGCAGCAGTGTCGATGGCCCA
AACTAGCACACACAAACGCGCGTGCACAGAGCAAGTAAGGCCGGGACGGA
CTGTCTGCAGATTAAAAACCCACCTTTCGGTATTCGTCGTCTCCTATTTT
CACAGATGGTCAGCCCTACTCTATTTTACTATTGTTAGAGCTCACACATC
GGTGCGAGCCGGTCCTAGTTGAGCCTTCTTATGAGCTATTTCTGGCCGAG
CGGAGTCGAGGAATAATTTGGGCGTTGCACCCTTACATTAGACACCTTCA
TCCCGAGCGAGGCTCATGATTGGTCAGGTGAACATTTTCGCGTGTTCCTT
CTTTTGGCTTCCCACTATAAATGGTTGTGCATCATAGTTGTCATCCGTGT
TCCCCGGCTCGTGTGCTTCAGCGCAGAGTCTATTCCGTATTCGTTGCAAC
GATCGCTGGGAGGCAGGACACGCGAAAGGTGAAAAATGCAGGAGAGACGG
GGAGCAAAAGAAGACAGAGAAGATTAGGTCCTGCCTTATCTAGGCACTTT
GAACCAATTTAAGAGCGTGGCAAAACGATTTTGAAGCAGTTTCGATGCTA
TTTATTTTTGCCGTGTCTTTTTCAACGAAACAGCGGAACTGTTTCAATGT
AGTTTTTTTCACGATTTAAAATCGGTTCAAAGTGCCCAGCCAATCCTATC
ATCAACCAACATAAGTAAATGTGGATGCCCCATGGTCGCCAAAAAAATGC
CCCATAGGCTTATCGGACAGAGGGAATATATACACAACAAACATGTTGCC
AAATCCGTGCGTCCCTGTGCTACACTCGGGACACAAGTCAGCAGCAGCAG
CAGCAGCAGCAGCAGTGCTTTTTTCGGCGAAGTGTGTACCAAAGCGCTCT
AGAAAGATACCAAAGCCATCAAATAACGATATGTAAGTTGTATCCACCAG
GTATACTCATGCTACATATACAGAGCTCCGTGATAGATGCAATACAATTC
ACATTACAAGTTGGTTGTTGTGTACCAAGAAGCGACCACTAGTTAATCTC
ATCAAGCATCCACTCGATGTGCACCTGACGCCATGTGTTATATCCTGCAG
CAAAGGAACCAGCAGCAACCTAGACGTTTGGGGCTTGTTGTGTGGATCAT
ACACTGAGATCAAGGAGAGGTGAATGGTACATACCAATTGAAAACTGATA
TTAACAGGTCCGGTCATCTGAGTTCAGCCATGATGCGGACCTAGGACATC
ATACACACAACAACACTATTTTACTGGAGCCCTAATAATGCTACGAACAT
CATCAAAACACAAGCAATCGCGCCATTCACCCAATTGTCCATAAAAAATT
GTAACCCTGTTTGACCGAAGCCCTCTGCCAATATACATTACTGCTAGCAC
TTGCTTTAACTCACAAGAGAGACTTTGAGCTTCACGAACGAGCATCAGCG
ACGCCTACCGAGCAGCACGTGAATTCTACCATGCGTAAGGCGAGGTTTCA
TTTGCTAGTAGCATACGTGGTATTTCAATCACTAACCATGGATGAATGTT
GTGCCCATTTTTCGACAAAAATCAAGGGTTGGGGTTGCATTTGTAATATA
CGATATTTCAAACGATCACCACGGTATATATATTGATATTGTGCCCATTT
TTTACGAAACTTTATGGTGCTTTTGGGGTGGGTTGGGGTTGCATTCGTGA
GCACTTGAGCAATCCGTCAAGCTAGACTCTAAATATACAGTACGCGCCAT
AAGGGCCGATTCAGGGGCAGGGGGTTCACGTTCGAATGCATATTCGGCGA
AGCATGTGCCACAACCCTGTAGAAAAATACTAGCCATCAAATAGCCATCT
ATAATCTATAGCCACCAGGTGTACTCAAGTTACATTATATGAGGGTGCAA
TACAATTCGAATTACAACAGATCACTTGTAGATGCTTGTCTAGCACGAAG
CGACCAGTCAAGAAGCGACCAGTACTTCATCTCAAATACCCACTCAGTAG
TGGATGTGGTGGTATATTTGCTCATAGTGCTAGACCGGTTCTTCCTTCCG
GACAATGTTCGTGCGTGATGCTTTATACTGCAAACAAGCGATAATTGCGG
ACATGTGTTCTTCTATACTTTGGTTCAACTGCTCTGACGCGCGGCCATAG
AAAACCGAACTAAGGGAAATCTTTTTGTACTATGGGATAGATCCTGTTTA
ACTTGAAGTAAGAGAGGAAACAGAAAGGGAATTTTACAACTGATTGGCAT
CTACGGCGCATTATCTCACACTACCGAGTCCAAAATCGCGTGCGAGAAGC
CTAGTTTATAGTTATGTCATGATGGAATACAGTGCCCCCGTTTAACTAGG
TTTCATTCGGGCGCCGAACCGCAACAAGGGTTGCTGCGCTCTAGGACAAA
CTTTTCCGAGGTTGGCCTCCTGAAGTTCGCACTGCAGCTAGCTTATCTAT
TAGCGTCACGGCCTAGCTAGCGATACGCTACCTGTAGCTTTTCTCAACGG
ACGGTAGCACCATTTTTTAACGTTCTTGTCACTTGAAGCTGCGCGAGATG
TCGACTCTGTTTCTGTCAGGCGCTTTTGGGGGGCCATGTTCACAGACAGT
ATCGGCATGGGCTAGCTAGCAATGCTGGTCGAGACTGCACTGGCACATGG
CGGTCGCGATTTACTCCAGGAGTGCCATCATGGACTTTGCGCGAACGAGT
GCGCATCGAGCGGTACGCGGCGGTCGCAGTCGTTATTTTCTCCAAACCGG
ATTGAGCGAGATATCGACGTTGTCTGCCATTGAATCGACTCACGCACACA
TAGTGCTCGTTGTGGGCAGCACTGCTAATAGCAGAGGCGACGCTGGTACA
ACTTAGTCGCGATATGTAGAGACAGACGAACAACCGGAAGGAATCCAGAG
ACCGGAAGGACGGAAGGACGAAAAGACGGACAGAATTCCAATTTCGCTGC
AGAAACCCAATTTGTAACAAAAAAACTGGGAATGCACTTGGTGTGCCCTC
TATCTCTACCTTCGTTTCGCGTGCCCGTGTCTAAATATTTCGATATTTCG
AAAAAGTCATAAATCACGCACAGACCCTGTTGAGACTCGGAAAATCATCG
GGGCACACTCTGGGAGGCCCATGGACGCGTGCTAGATGCGCAACGCTGCC
CACCGCAACCTCTAAGCAAGCGATAAATGGAGGCAGCATACAGAAAAGAG
AGCAAAATGTAGCTAAAAATACAGTGCGCCGTTTTGGTTAGATCGGTAGT
TACGTTGCGACCTCTGCCACATACCGTGGGTCTTGCGTTGCATGCCGTCG
GCCAGAAACAGAGTCCCTTCTTTGCCCGTCCTCGCAATTATCGAAAAACA
CTTAATTTGTCTATCCTTTCACCCAACCATTACAACCTACAACTAAATCA
TTTCTCCTCACGTCCATTCCGCACAAGTGTGAATGGCCGTCTCCGGTTCT
TGTAATAGAGGCAATAAAGACGACAACAGAGGTGAACCGCGAGCCGAGAC
CGAACGCTCGATCTGGACAGCGGCAAAGCGTTCATGTTGTGGCGATTATC
CTGTAGTGCATGACATCGGAACCCAGCTGTCAGGTGCATTTTGTTATCTA
TGCGTTACGGAGTTCGTAAACGCCTCACTCGCTCAACGTTCATTGTACTC
GGGCACAATGTTGGACAGTAGAGTTAGCTGTATTGCGGCACAACCGTTGC
AGTAATGATAGAGGTGAACATGTCTGTTGAGATACACGCTAATTCAGATA
CACTTATTTCCATTGTGCATAGCTTCGCCGTAAATTGGTCAATTTCTATT
TGGCTTCGTTTGTATTGTGCATGACAGCCAGGCGCTTAACTTGAGCTTTT
GAACTCGTTGAGGGTCTACGTTCTTCTCGAGAACACCTGGCCGTTCTATC
CTCGAGGCGTGTTTCTTGCCTCTTCTTGGCTAATTATCTGCGGTTGTAGC
TTTTGTATTTTTTAAATTGTTTTCGTTGCCTAATCTTTCGCACCAACGAT
ACGCTCAGTTTAAGCACCTCAGCGTTCCGAAAGGCGATTCCAGCGTCGAG
AAACAACGAAAAACGTATGCGAGCAAAATATACTGTCCCGTAGGTTGAAG
GAAACAAAACGCAAAACATGGCGGTTTGCTAAGGACTGCACCACGAACGG
TACACGGAAACCATATTTTGGGCAGTTGGAGCCGCGCGGAGAGCTTCGTT
GCAATACTTGGCAATATTCTGAACCGTCTGCTTAATTGTGGCTTCGTCGG
CCCAGAGAGAAGAGTTGCTTTTACCAATTGCCGCACAGACAGCGCCCTAC
ATGCCGGGGTTGTTAGGCTAGGCTGGATAAACGTTTGTGTTCGAGTTTAG
TGGAAATTAGCGAAATACCTGCTTTGCGCAAAGAAATTTGACCATAACGT
ATTGGAGTTGACTTGGATGATCCTGATATTTCGCATCCTGGCTGCTCATG
GCATGAAAAAATACTCTCAAAAATTATTGTGAAAGTAAAAAAATTATTTT
GGTCGAGTACGGCGAGGTCAAACACACAACTTTGATCAGAATATTGTTCT
GAACACCAAGGGGATAGGGTATTTATATCCCGGATCAACGATTTATTTAT
ATTTTCTCCAGGAAGACCGACTTGACCCGTTTCGTTCATATTTTCGCCAA
AGTAGGAGTTCTGAAATGTGTCAGATCACATGCAATCAATTGCTTTACCA
AGTGGATCTTGGTTGAGATAGGGAATGTTTTGACTGTGTTCTCGTGTCGT
CAGGACCATACTCTACTGCTTTCCCTGCCATTAATATTTGTCCAATTTTC
TTTTTTGAACGATCATGTTATGGAAGTCCGAACTCTTCTACCTCTGGATA
AGATCGGTATCCTACTCACCATAGTTCTCACAAGACAGTCATTTGTGCGT
CAGGTGTATCGTGCGTATCTTAATTGGGATGTTTACCTCTATGCTCGAAG
ACATATCAGTATTCACCTGTCAGTTGGCGTCTGATGGAGACATCATAATT
GCAGATTGATAGGTCTTTCCGGTCCGAAATACTACATACCTGGTGGATCC
CAGTAGTAGTAGTAGTGGCAAAATTCCATACCAGTGAGATCAAAGCAGTA
AATGAGTAACTTCCAGCTATGACCGCGCAGAGCAGCCTAACAAAGAAATT
TGGCTTATTATTGATTGAACTGAGCTGCTCCGACGTTCTTCTTTGTTGGG
TGGATGGTCCCGGGTGGGATACATCACGAGTACCTGTATGCCGATGCTTT
TACGATTGTTGGCCAGAGCCTACCCTAGGAATATGCGAGCCCACGATGAA
CCCGCCGTTTATGCGGCGTTCGCTTTCTTTCTGGACTGTTCATTTTCGGT
CAGGCGGTTAGCAGTGACCAGCTCTTGGGGGCTAGCTTGTTCTCGTTGAG
CATCACCGTCTTCGTGTACTATACGCTATGGGTTATTGTCCTGGTGAGTT
TTAGCATTTTTGGCGAAAGTACCTTCTCTGCGTTCATGTCCGTTCTGCTC
AACTGACTGCACGATATAGTGGTGTCGTCTAGCTGAAACCAAGCCGGGGT
ATTGTCTGGGATATCGATGGGCATGTATACATGCAACGAAACAAGTTTCC
GGTTATTGTGCATCAGCATTTGCTGAGCTACAGCTGCTGCAGCAGCTGCT
GCTTCTGTAGTGAAGTTGTCTCACCTTGCATGTGCCTATACCTTGCCTTT
CGTTTATTTCGCTTGGTAGCTTTCGCTTCCCCCCTTAGAATCAGTTACGA
GATTTGTCTCCTTTATTCATTTCGTCGTCTCTTCTTCGTTCTGGTTTGCG
GTTCGGCGCCAGCCGTTCGTGGATACGTCTCATCCCGTGCAGGTCTACTT
CTTGCCGCGAAAGTACGCCATCGCGATCCCGACGGTTCTCGTCATCATCC
TAATCACCCTCGTTGCCACGTTCGTGGGACTCACCCTCGTCAAGTCCGCC
AGGAAACAGAAGCAGAAGGCCTCATAGCTGGTGAAAAATGCCGGGTAGCG
TAGCATACTATTGAGCAGCTCTGTCTAACTGATGTAGTAGTTCTTGAGTC
CTCTTGGTCCCAGCATAGAAGTCGCATGGAGATGACGCCCTTGTGTGTGC
TATGTACAACATTGCTTTGCAGAGAATAAGGGCTCCAGTTATATCGGAGA
CAGGAGCGACTGACCCATTTGTGGAGTTGTTTCTGCACCCATCTCATGGA
TCGTTCGCATGTACGTGTTTCCGAAAGCTGCCGTGTGAGAGAGAAGAAAG
GCTGGCGTGCTGGCCTGTGTCGTGCTCCTTCCTCGTCTCTATCTGAGCCG
TGACGCAAGCGTAGTAGGTAGAGCTACGCAGAGGACCAACGCGGTAACGT
TGCTATTCTCGCTTATTTGTTCCCCTCCAGAGCCCGACAGCAGCTAGTGT
GTAAGTCTGCTCATAGTACTTGAGAAAGTAAGCTTGTAACCGGAGCTTGA
ACGTCGCCGTGGTATTATTGCGCAAGCGGCAGGCACTCTCAGCCAGGCAG
GGGTGCTGTTGTCCCAAGGTAAAACGTTGCCGTGTCGCCAAAACTTGGTT
AGTGTTTTGTGCACAGCCGCAGGTGAAATCGGCGTGGTAATTTAGGGGGA
TGAACAACGCACACTTGCCGGCCGTTGTAGTGCAATTTCATCGTAATGCC
GTATCTTCCCCCCTGCTGGTTCCTATCCGCACCACGTGATAGGAGCGGGG
GTCGCACGGCTTGGTACACCTGTACAGCTTGATTTTGGTTGTATGTGCTA
GACCGAGGCAGCTCGGACCGAAGCACTCACATGCCCGTCTATGATGTCTG
TATATCTGCCGGTTTATGTGTCTGTCTGTCTTGGGTCTACCGTATAGGTG
GACCAGACCAGGGTGTGCGGCGAGTTATTTGGTGATCTACACAATAATTA
CCGCATTTATTCACGTTTTCTCAGCTAACGATCCATGTGTTTTGGGGAAG
TTTTGGGAGCATCGCTCGGCAGAGGTCACAATCGCGAAGGAGTGTGCCAT
AGCATCATTCCTTTGTATACACTACATACGACTGCTCGCCAACGTCGCAC
CAGGAAGAAGCCGGAAGTACAGAATCGGTGCTATATTCGACATAGGGGTG
TACAGGATACTGAGGTCACTATCACCATGCAATCCACGGACCTACGCCTG
AACGGGTAGGGTAGCTCGTGAACTGAGCACGACTGGAAGTCTAGTCAGAG
GTCTTTTA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1189:2..11259- >mRNA_H-paniculata_contig1189.1207.1 ID=mRNA_H-paniculata_contig1189.1207.1|Name=mRNA_H-paniculata_contig1189.1207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=516bp|location=Sequence derived from alignment at H-paniculata_contig1189:2..11259- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGCGGTTAGCAGTGACCAGCTCTTGGGGGCTAGCTTGTTCTCGTT
GAGCATCACCGTCTTCGTGTACTATACGCTATGGGTTATTGTCCTGGCGG
TTAGCAGTGACCAGCTCTTGGGGGCTAGCTTGTTCTCGTTGAGCATCACC
GTCTTCGTGTACTATACGCTATGGGTTATTGTCCTGCCGTTCGTGGATAC
GTCTCATCCCGTGCAGGTCTACTTCTTGCCGCGAAAGTACGCCATCGCGA
TCCCGACGGTTCTCGTCATCATCCTAATCACCCTCGTTGCCACGTTCGTG
GGACTCACCCTCGTCAAGTCCGCCAGGAAACAGAAGCAGAAGGCCTCATA
GCCGTTCGTGGATACGTCTCATCCCGTGCAGGTCTACTTCTTGCCGCGAA
AGTACGCCATCGCGATCCCGACGGTTCTCGTCATCATCCTAATCACCCTC
GTTGCCACGTTCGTGGGACTCACCCTCGTCAAGTCCGCCAGGAAACAGAA
GCAGAAGGCCTCATAG back to top
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