prot_H-paniculata_contig4910.12080.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4910.12080.1
Unique Nameprot_H-paniculata_contig4910.12080.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
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BLAST of mRNA_H-paniculata_contig4910.12080.1 vs. uniprot
Match: A0A6H5J7D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D4_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 5.700e-8
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:   29 EVFDLVWKALGALHKHSACVEDVAELLETCCED 61
            EVFDLVWKAL  L + S CVED+A+LLETCCED
Sbjct:  161 EVFDLVWKALEDLDQDSTCVEDLADLLETCCED 193
[Close]
BLAST of mRNA_H-paniculata_contig4910.12080.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 5.860e-8
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:   29 EVFDLVWKALGALHKHSACVEDVAELLETCCED 61
            EVFDLVWKAL  L + S CVED+A+LLETCCED
Sbjct:  539 EVFDLVWKALEDLDQDSTCVEDLADLLETCCED 571
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4910.12080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7D4_9PHAE5.700e-875.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBB5_ECTSI5.860e-875.76Essential abundant protein involved in regulation ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4910contigH-paniculata_contig4910:12543..13670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4910.12080.1mRNA_H-paniculata_contig4910.12080.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4910 12542..13670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4910.12080.1 ID=prot_H-paniculata_contig4910.12080.1|Name=mRNA_H-paniculata_contig4910.12080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
GSSGGSDTAGSRDSGGNARRENKQEEEEEVFDLVWKALGALHKHSACVED
VAELLETCCEDAASRRRR
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