prot_H-paniculata_contig4909.12074.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4909.12074.1
Unique Nameprot_H-paniculata_contig4909.12074.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length420
Homology
BLAST of mRNA_H-paniculata_contig4909.12074.1 vs. uniprot
Match: D7FTY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY2_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 1.160e-93
Identity = 181/396 (45.71%), Postives = 246/396 (62.12%), Query Frame = 0
Query:   24 TGGLRRIGVGQGGRLSVRLPRATAILRVTTAWSDECDITVSRVPLRMVALGDYKGEPPDMKNINIGDLADCGLKADIDESMQQISVATVGDEGGEQEAYFIQAVIPEFFSVDYLATRGSVTIRHKLKGNCHVHLDEGDINVDVVRGESTKLVTGCGRVVSKELEGNVTIAATE-VNAKLVNGANVQIDATG-DSSSVTVGGLYSSAARITSEGRVNVSNCHGRILVSTIGALGVVTLASVNGVAEVSTGGGDANIHVEALEKGTCSTIRSGRGDILVSMSHDVRARINLAGKIGALPSVFDGLVQADKAQGRIDF----PSMA--QGITVRQDIGGGKINLVGAREQSLDNFF-GHDEQNAVLPSLNVSSEKGGVGLETVSWIENITRRFNSARDS 410
            +G  + I +GQGGRL + + +A A+++VTT W D C + VSR+P    A  D +          + +L   GL    DE+  Q+++A   +    ++ Y I+AV+PE FSV+ LA+ G+V++  K+KG+C V LD GDINV +VRGE+ +L TG G +   ELEGNV I AT  V A+L+NGA V+I+ TG D  SV VG LYSS A ITS G V VS+CHGRI V T    G V L+SV+G A VS G G A +H++ LE+GT S IRS  GDI VS+S  V A + + G +  +PS F G  Q  +A G I      PS A   G T   D GGGKI++VGAR QSL  +F G+    +V P L+V +E G V +ET+SW +NITR+F +AR++
Sbjct:   39 SGHAQTIPIGQGGRLVIDMAKAAAVIKVTTQWIDSCSVEVSRLP----AGSDGRSLAGAGAKEVLSNLDAAGLSLHADEAHAQVTLAHDKEHPSVEDTYLIEAVVPELFSVELLASHGNVSVSKKIKGDCKVRLDRGDINVGIVRGETIRLSTGRGHIKVDELEGNVDITATSNVRARLINGAKVKINTTGHDDPSVNVGALYSSGAHITSAGNVGVSSCHGRIAVHTADTSGSVNLSSVSGTAHVSAGEGGATVHLDVLEEGTASHIRSNGGDINVSLSQQVDADVEITGDVVKVPSTFKGDTQRGRAVGSIYSAQVEPSRATRHGSTSSTDAGGGKIDMVGARGQSLRQYFPGNTATTSVRPKLSVVAEGGCVVVETLSWADNITRKF-AAREA 429          
BLAST of mRNA_H-paniculata_contig4909.12074.1 vs. uniprot
Match: A0A4D9CTK1_9STRA (DUF4097 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTK1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-6
Identity = 87/370 (23.51%), Postives = 145/370 (39.19%), Query Frame = 0
Query:   35 GGRLSVRLPRATAILRVTTAWSDECDITVSRVPLRMVALGDYKGEPPDMKNINIGDLADCGLKADIDESMQQISVATVGD-------------EGGEQEAYFIQAVIPE---FFSVDYLATRGSVTIRHKLKGN-CHVHLDEGDINVDVVRGESTKLVTGCGRV-VSKELEGNVTIAATEVNAKLVNGANVQIDATG------------------DSSSVTVGGLYSSAARI--TSE----------------GR---------VNVSNCHGRILVSTIGALGVVTLASVNGVAEVSTGGGDA--------NIHVEALEKGTCSTIRSGRGDILVSMSHDVRARINLAGKIGALPSVFDGLVQADKAQGR 333
            G   SVRL R  A + +T+ W D  ++ +                PP    +++  L   G K   +E    +S  +V D             EG     Y +   +PE           + G++++  K++G    +   +GD++++ +RG +        +V V K LEG+VT+ A  + AK+V G  V++   G                    + +TV  LY   A I  T+E                GR         V +   HG + V  +   G V L  VNG A V TGGGD         ++  E LE G  + + +  G + + ++ D++A + + GK     +    L+ A K +GR
Sbjct:   32 GSSFSVRLHRVPAQISITSGWIDHTELRIDT--------------PPHAPALDVQVLRGNGAKGTAEEE-STLSTLSVSDAKILLPPDALKYMEG----KYHVHITVPEKLHSLQAHLSQSPGTISVTSKVEGEGIDILSKQGDVHINKIRGVTXXXXXXXXKVTVEKWLEGDVTVRAGRLTAKMVKGHRVRMLVRGREGEREAGRAEPGEVGREGEAPLTVEALYGKDAAILCTAEPEPASPLHREMEGGKGGRGGGEGEGTAVCIGRAHGALKV--VATKGGVRLGGVNGSAVVQTGGGDREGGRAGGIDVRFEGLEPGQTNVLATQGGPVNLLVARDLQASLRVEGK-----AAVSSLLAALKEEGR 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4909.12074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTY2_ECTSI1.160e-9345.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CTK1_9STRA1.760e-623.51DUF4097 domain-containing protein n=1 Tax=Nannochl... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34094FAMILY NOT NAMEDcoord: 122..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4909contigH-paniculata_contig4909:2066..5184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4909.12074.1mRNA_H-paniculata_contig4909.12074.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4909 2043..5314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4909.12074.1 ID=prot_H-paniculata_contig4909.12074.1|Name=mRNA_H-paniculata_contig4909.12074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
MMQLSRVHMKHIGIYQHFSTAAGTGGLRRIGVGQGGRLSVRLPRATAILR
VTTAWSDECDITVSRVPLRMVALGDYKGEPPDMKNINIGDLADCGLKADI
DESMQQISVATVGDEGGEQEAYFIQAVIPEFFSVDYLATRGSVTIRHKLK
GNCHVHLDEGDINVDVVRGESTKLVTGCGRVVSKELEGNVTIAATEVNAK
LVNGANVQIDATGDSSSVTVGGLYSSAARITSEGRVNVSNCHGRILVSTI
GALGVVTLASVNGVAEVSTGGGDANIHVEALEKGTCSTIRSGRGDILVSM
SHDVRARINLAGKIGALPSVFDGLVQADKAQGRIDFPSMAQGITVRQDIG
GGKINLVGAREQSLDNFFGHDEQNAVLPSLNVSSEKGGVGLETVSWIENI
TRRFNSARDSPEQSQSHTH*
back to top