mRNA_H-paniculata_contig4906.12070.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A6H5JI91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI91_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 1.420e-131 Identity = 235/395 (59.49%), Postives = 288/395 (72.91%), Query Frame = 2
Query: 14 MRASSLAFACLAVRCSKMSERLATFMGAFSGVIEPGEGSAVSRALPARRILILDPACSSCLHDLQAAGFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSS--------IAGNEDQRAAVASEIGVK-GPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEVCCAVVGVLDGTLPPERVVSGNARESLRRSR 1171
MR++ +A A LAVR RL T++G G+ + +R R IL+LDPA S ++ AG++VTA GLS+ +LE VL YDAVVVRSANQI+R+MLV+S R+A+VGRAGSGVDNIDL AA+ELGVPVVN+PTGN+ SVAELV GLMLG+SRSI AH T +RGEWAKS F G TL+GKTLG++GFGSVG LAR+A+ FGM V+IA SS + I +R +AS+ GV PL LD++LS+SDF SVH PLT DT+G I + ELA MK SAVVINAARGGV+DE ALL +LE+G LGGAALDVFE E++PL++HIV LCR PNV+CTPHIGGSTEEAGERVL EVC AVV GTLP ++V+G ++R R
Sbjct: 1 MRSTGVALAFLAVR-----SRL-TWLGPRQGIYGALRATDTTR----RHILVLDPA-SPAYQGIETAGYQVTAAHGLSDPELEQVLPA--YDAVVVRSANQITRNMLVASPRVAIVGRAGSGVDNIDLKAASELGVPVVNAPTGNSGSVAELVMGLMLGVSRSISPAHDTTRRGEWAKSNFTGRTLSGKTLGIVGFGSVGIALARLAVAFGMVVMIAEGSSPTPCSGRAEEIDPRASEREGMASQAGVTLPPLPLDELLSKSDFFSVHCPLTADTKGLISRRELALMKPSAVVINAARGGVVDELALLQSLEQGHLGGAALDVFECERSPLQDHIVNLCRLPNVLCTPHIGGSTEEAGERVLAEVCGAVVDFFQGTLPASKIVNGAPDMTVRLKR 382
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: D7FGX2_ECTSI (Phosphoglycerate dehydrogenase, incomplete n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX2_ECTSI) HSP 1 Score: 269 bits (688), Expect = 3.130e-81 Identity = 160/273 (58.61%), Postives = 191/273 (69.96%), Query Frame = 2
Query: 221 EVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSS--------IAGNEDQRAAVASEIGVK-GPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFP 1012
+VTA GLS+ +LE VL YDAVVVRSANQI+R+MLV+S R+A+VGRAGSGVDNIDL AA+ELGVPVVN+PTGN+ SVAELV GLMLG+SRSI A T +RGEWAKS F G TL+GKTLG++GFGSVG LAR+A+ FGM V+IA SS + I +R A AS+ GV PL LD++LS+SDFLSVH PLT DT+G I + ELA MK SAVVINAARGGV+DE LG L + + P + LC P
Sbjct: 14 KVTAAHGLSDTELEQVLPA--YDAVVVRSANQITRNMLVASPRVAIVGRAGSGVDNIDLKAASELGVPVVNAPTGNSGSVAELVMGLMLGVSRSISSARDTTRRGEWAKSNFTGRTLSGKTLGIVGFGSVGIALARLAVAFGMVVMIAEGSSPTPCSGRAEEIDPRASEREATASQAGVTLPPLPLDELLSKSDFLSVHCPLTADTKGLISRRELALMKPSAVVINAARGGVVDE-----------LGARVLSLSNFHQRPSDRAPRELCSVP 273
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A7Y2JUK6_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7Y2JUK6_9BACT) HSP 1 Score: 239 bits (610), Expect = 4.740e-67 Identity = 153/350 (43.71%), Postives = 212/350 (60.57%), Query Frame = 2
Query: 218 FEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEVCCAV-VGVLDGTLPPERVVSGNA--RESLRRSR------ERLGLPPSATL*REGPIEINHVK 1240
F++ + GLS DL H + DAV+VRSA +I+R L + L V+GRAG G+D ID+ AA E G+ V+N+P GNT S EL F L+L + R IP A +++ GEW + RF G LAGKTLG++G G VG E+AR A F M VL+ + NE++ A+ E+ ++LD++L +D LS+HVPLT T G +G+ +LA MK A ++NAARGGV+DE ALL ALE G+L GAA DV++ E ++ + RL NV+ TPH+G STEEA V E+ AV +L+G L R V+ A E +RR R ERLG L +GP+++ V+
Sbjct: 29 FDIVEQVGLSGDDLAHAIGLA--DAVLVRSATRITRESLTEAQHLQVIGRAGVGIDTIDVAAATEKGIAVLNAPAGNTVSATELTFALILALLRKIPMADYSMKEGEWDRGRFQGAELAGKTLGLVGAGRVGTEVARRAKAFDMHVLVYDPYL-----NEERARAMELEL-----VALDEVLRAADVLSLHVPLTDSTAGMLGETQLALMKPGACLVNAARGGVVDETALLHALEAGRLAGAAFDVYDTEPLAADHPLRRL---DNVVLTPHLGASTEEAQRSVAFEIATAVRAALLEGDL--SRAVNAPAVGGEKMRRVRPLLELSERLGRLARTLL--DGPVQVAEVR 359
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A0S4N1B6_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Candidatus Thermokryptus mobilis TaxID=1643428 RepID=A0A0S4N1B6_9BACT) HSP 1 Score: 239 bits (609), Expect = 5.460e-67 Identity = 136/318 (42.77%), Postives = 201/318 (63.21%), Query Frame = 2
Query: 158 RILILDPACSSCLHDLQAAGFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEVCCAVVGVLDG 1111
+ILI DP SC++ L+ GFEV + G+ +++ ++ N Y A++VRS +I+ ++ + L ++GRAG GVDNID+ AA G+ V+N+P GNT S AE L+L ++R+IP+A+ L+ G W + +F G L GKT+G+IG G +G+E+A FGM V+ + SS VA + GV+ +LD+I +SDF++VHVPL +TRG IG+ ELAK K +IN ARGG+IDE ALL A+E GQ+ GAALDVF +E P ++ +++ P VI TPH+G +TEEA E+V ++ + L G
Sbjct: 2 KILITDPIEESCVNILKGEGFEVDLKPGIPRDEIKRII--NDYVALIVRSGTKITADIINEARNLKIIGRAGVGVDNIDVEAATRRGIIVMNTPGGNTISTAEHTMSLILALARNIPQANDDLKAGNWERKKFMGVELYGKTIGIIGLGRIGREVALRCKAFGMNVIGYDPVLSS---------EVALKFGVELVSNLDEIYRRSDFITVHVPLNDETRGMIGREELAKCKRGVRIINCARGGIIDEMALLEAIESGQVAGAALDVFSEEPPPKDHPLIK---HPKVIVTPHLGAATEEAQEKVAIQIAHQIADALKG 305
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A538TMU9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A538TMU9_9BACT) HSP 1 Score: 232 bits (591), Expect = 6.210e-67 Identity = 141/313 (45.05%), Postives = 202/313 (64.54%), Query Frame = 2
Query: 155 RRILILDPACSSCLHDLQAA-GFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEK---APLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEV 1081
RR+L+ DP + L L+A+ G +V +GL+ +L ++ DA +VR ++SR ++ ++ RL V RAG+G+DNID+ AA E G+ V+N P N +VAELVFGL+LG+ R IP A A+++RGEW KSR+ G L GKTLG++G G +G+ +A+ A GF M + + S D RA V +GV+ PL+L D+L ++D L++HVPL +T+G IG ++A+M A+++NAARGG++DE ALLAALE G L GAALDVF E +PL +H P V+ TPHIG +T EA E V E+
Sbjct: 3 RRVLVSDPLSARALETLRASPGIQVDVRRGLTEAELLPLVAE--IDAWIVRGGTKVSRRLIEAAPRLRWVARAGAGLDNIDVAAAKERGIGVLNVPGANAVAVAELVFGLLLGLLRQIPAADASVKRGEWDKSRYMGRELRGKTLGIVGLGKIGRAVAQRARGFEMPCVGHDPHVS------DTRARV---MGVE-PLALQDLLGRADILTLHVPLAPETKGMIGPAQIARMPRGAILVNAARGGLVDESALLAALETGALSGAALDVFAGEPPKGSPLLSH-------PRVVLTPHIGAATVEAQEAVGEEI 296
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A7W1H033_9BACT (D-3-phosphoglycerate dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A7W1H033_9BACT) HSP 1 Score: 238 bits (608), Expect = 8.960e-67 Identity = 155/351 (44.16%), Postives = 220/351 (62.68%), Query Frame = 2
Query: 158 RILILDPACSSCLHDLQA-AGFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEVCCAVV-GVLDGTLPPERVVSGNA--RESLRRSRERLGLPPSA 1198
RILI D + L LQ + FE+ GL+ DL+ L DAV+VRSA +ISR+ L S RL V+GRAG GVD ID+ AA E G+ V+N+P+GNT S AEL F L+L + R +P A ++++GEW ++RF+G L GK++G+IG G +G E++R A FGM VL+ + NE++ + E+ SL+D+L ++D +S+HVPLT T G IG+ +LA MK A+++NAARGG++DE AL +AL ++GGAALDVFE+E P ++ L N+I TPH+G STEEA + V E+ AV +LDG L R V+ A +++R+ R L L A
Sbjct: 7 RILIADKISADGLLPLQQDSRFEIVNRPGLTGEDLK--LAIADADAVIVRSATRISRAALASPGRLKVIGRAGVGVDTIDVDAATEHGIAVLNAPSGNTISAAELAFALLLALVRRVPAADRSMKQGEWDRARFSGTELHGKSMGLIGAGRIGGEVSRRARAFGMRVLVYDPYL-----NEEKARTLEVEL-----TSLEDVLRRADVISIHVPLTESTAGLIGEAQLAMMKPGALLVNAARGGIVDEAALASALAGRRIGGAALDVFEQEPLPADHPFRSL---DNIILTPHLGASTEEAQQNVALEIAEAVRDALLDGDL--SRAVNAPAIGGDAMRKLRPLLDLAERA 340
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A8J5X3M8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3M8_DIALT) HSP 1 Score: 232 bits (592), Expect = 1.260e-66 Identity = 140/324 (43.21%), Postives = 199/324 (61.42%), Query Frame = 2
Query: 116 PGEGSAVSRALPARRILILDPACSSCLHDLQAAG-FEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQIS-RSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEV 1081
PG A+S A A R+L LD +L G + V+AE GL++ D+E L+T + A+V+RSAN + R+ + +L VVGRAG G+DN+D+ A GV VVN+PT + RSVAEL LML +R +PEA +L G W ++ G ++ G+ LG+IG+G++G+ AR+A GM SS R +A GV+ +S+ ++L+ SD LS+H PL IG+ +LA MK +A+++N ARGG++DE ALL ALERG+LG A LDVF +E+APLE + RL R V+ TPH+GGST EA E + E+
Sbjct: 20 PGRAVAMSAAEYALRVLCLDS--DGVARELAKLGDYAVSAENGLTDADVEAALRTGDFCALVLRSANTCTARTFDAAGGQLRVVGRAGIGLDNVDVREATARGVAVVNTPTASVRSVAELAIALMLAAARRVPEARDSLLAGRWDRAALEGRSVHGRVLGIIGYGAIGEATARIAAALGMRCRTLETSS---------RREMALAHGVR-LVSMPELLAGSDVLSLHTPLAPSAPPIIGREQLAAMKPTAILVNTARGGLVDEAALLGALERGELGAACLDVFSRERAPLEPTVARLVRHARVVATPHLGGSTAEAREAISTEL 331
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A2S8SU38_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Abditibacterium utsteinense TaxID=1960156 RepID=A0A2S8SU38_9BACT) HSP 1 Score: 237 bits (605), Expect = 2.150e-66 Identity = 145/324 (44.75%), Postives = 206/324 (63.58%), Query Frame = 2
Query: 161 ILILDPACSSCLHDLQAAGFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEAGERVLGEVCCAVVGVLDGTLPPERV 1132
+L+ DP + + LQ +V + GL+ L ++ YDA++VRS +I+R +L ++++L +VGRAG GVDNID+ AA E GV VVNSP GNT +VAEL G+M+ + R + AH ++ GEW +S+F G L GKTLG++G G +G E++R A FGM +L + +S QRAA ++G++ S++DIL ++DF+++H PLT +TR I LA MK +A+++N ARGG+IDE AL AL+ GQ+GGA LDV+E E P EN LC NVI TPH+G STEEA V +V +V VL+G P V
Sbjct: 4 VLVCDPIAENGIEILQKTA-DVDVKIGLTEDQLVEIVAH--YDALMVRSQTKITRRVLEAATKLQIVGRAGVGVDNIDVPAATERGVIVVNSPAGNTVAVAELALGMMISLVRKLIPAHNSVADGEWKRSKFLGTELYGKTLGIVGVGRIGVEVSRRAASFGMTILGFDPFLTS------QRAA---QLGIEAT-SIEDILKRADFVTLHTPLTKETRHLINADSLATMKPNAIILNCARGGIIDENALYNALKAGQIGGAGLDVYEVEP-PKENP---LCTLDNVILTPHLGASTEEAQVEVALDVARQIVDVLEGRSPSSAV 310
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A7C3TL48_9ARCH (Hydroxyacid dehydrogenase n=1 Tax=Nitrososphaerales archaeon TaxID=2268197 RepID=A0A7C3TL48_9ARCH) HSP 1 Score: 229 bits (584), Expect = 5.220e-66 Identity = 134/300 (44.67%), Postives = 190/300 (63.33%), Query Frame = 2
Query: 158 RILILDPACSSCLHDLQAAGFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEA 1057
++L+ DP + CL L+ AG EV+ + +S DL + Q YDAV+VRS +I+ S++ + +L V+GRAG GVDNID+ AA++ + VVN+P +T++VAEL GLML ++R IP ++ G W K G L GKTLG+IG G +G + +A FGM +L+ + + E ++ +E+ + LD +LS+SDF+++HVPLT TR I + LAKMK A +IN +RGGV+DE+AL AL+ G L GAALDVFE E P + +V+L PNVICTPHIG T EA
Sbjct: 2 KVLVCDPVSTKCLEVLKGAGLEVSYQPKISAEDL--IKQIPEYDAVIVRSRTKITSSVIEAGKKLKVIGRAGIGVDNIDMEAASKRNIVVVNTPESSTQAVAELTIGLMLSLARKIPLGDRGIKEGRWLKGELMGIELRGKTLGIIGLGRIGSRVGALAKAFGMKILVNDIAKLP----EQLLKSLEAEV-----VDLDTLLSRSDFVTLHVPLTPQTRHMINRERLAKMKKGAYLINTSRGGVVDEEALYEALKEGWLAGAALDVFEHE--PPTSEVVKL---PNVICTPHIGAQTVEA 285
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Match: A0A4Q3WCZ9_9BACT (Phosphoglycerate dehydrogenase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3WCZ9_9BACT) HSP 1 Score: 229 bits (584), Expect = 6.860e-66 Identity = 140/299 (46.82%), Postives = 195/299 (65.22%), Query Frame = 2
Query: 161 ILILDPACSSCLHDLQAAGFEVTAEQGLSNCDLEHVLQTNSYDAVVVRSANQISRSMLVSSSRLAVVGRAGSGVDNIDLVAAAELGVPVVNSPTGNTRSVAELVFGLMLGISRSIPEAHATLQRGEWAKSRFNGHTLAGKTLGVIGFGSVGQELARMAIGFGMAVLIANQSSSSIAGNEDQRAAVASEIGVKGPLSLDDILSQSDFLSVHVPLTLDTRGFIGKLELAKMKSSAVVINAARGGVIDEQALLAALERGQLGGAALDVFEKEKAPLENHIVRLCRFPNVICTPHIGGSTEEA 1057
+L+ DP + + L++A EV + GL+ L ++ YDA++VRS +I+R +L ++++L +VGRAG GVDNID+ AA E GV VVNSP GNT +VAEL G+ML + R + AH ++ +GEW +S+F G L GKTLG++G G +G E+AR A FGM +L + +S QR A ++G++ S++DIL ++DF+++H PLT DTR I LA MK AV++N ARGG+IDE AL AL+ G LGGA LDV+E E P EN + L NVI TPH+G STEEA
Sbjct: 4 VLVCDPIAENGIEILRSAA-EVDVKIGLTEDQLVEIVAN--YDALMVRSQTKITRRVLEAATKLQIVGRAGVGVDNIDVPAATEQGVIVVNSPAGNTVAVAELALGMMLSLVRKLIPAHQSIAQGEWKRSKFLGTELYGKTLGIVGVGRIGVEVARRATAFGMTILGYDPFLTS------QR---AGQLGIEAT-SIEDILRRADFVTLHTPLTKDTRHLINANSLATMKPGAVILNCARGGIIDETALYEALKAGTLGGAGLDVYEVEP-PKENPLREL---DNVILTPHLGASTEEA 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4906.12070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4906.12070.1 >prot_H-paniculata_contig4906.12070.1 ID=prot_H-paniculata_contig4906.12070.1|Name=mRNA_H-paniculata_contig4906.12070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bp MRASSLAFACLAVRCSKMSERLATFMGAFSGVIEPGEGSAVSRALPARRIback to top mRNA from alignment at H-paniculata_contig4906:7505..12648- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4906.12070.1 ID=mRNA_H-paniculata_contig4906.12070.1|Name=mRNA_H-paniculata_contig4906.12070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5144bp|location=Sequence derived from alignment at H-paniculata_contig4906:7505..12648- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4906:7505..12648- >mRNA_H-paniculata_contig4906.12070.1 ID=mRNA_H-paniculata_contig4906.12070.1|Name=mRNA_H-paniculata_contig4906.12070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2388bp|location=Sequence derived from alignment at H-paniculata_contig4906:7505..12648- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |