prot_H-paniculata_contig490.12058.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig490.12058.1
Unique Nameprot_H-paniculata_contig490.12058.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A6H5KYB6_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.980e-31
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    6 QVYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
             VYY A+  DL+LRFNWLYSLIPPGHNPLPF+HSSTLP+ +TT V VCE LRRTMWGFFR+ENE +NN
Sbjct:  243 SVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVVITTNVIVCEFLRRTMWGFFRVENEHLNN 310          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A835YP28_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP28_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.230e-17
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    8 YYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            YY  IA DL+LRFNWLYS IPPG +     H   LP +VTT+V + E+ RRT+WGFFRLENE + N
Sbjct:  689 YYATIAVDLVLRFNWLYSFIPPGKS-----HFFILPNYVTTLVIILEIFRRTLWGFFRLENEHLRN 749          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A835ZE89_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE89_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.990e-17
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    7 VYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            VY+  IA DL+LRFNWLYS IPPG +     H   +P +VTT+V + E+ RRT+WGFFRLENE + N
Sbjct:  726 VYWATIAVDLILRFNWLYSFIPPGTS-----HFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRN 787          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A2D4BK39_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK39_PYTIN)

HSP 1 Score: 76.6 bits (187), Expect = 1.180e-14
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    7 VYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            VYY+AI ADL+LRF W  +LIPPG        SS+LP+++     V EL RRT WGFFRLENE + N
Sbjct:  934 VYYVAIVADLVLRFAWTLTLIPPGS-------SSSLPLYLQPFTMVLELFRRTYWGFFRLENEHLRN 993          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A1E7FCK4_9STRA (EXS-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCK4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.770e-13
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0
Query:    1 PFLLPQ--VYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            P + PQ   YY  I  DL+LRF W+ +L+PP         S  LP ++T +V + EL RRT+WGFFRLENE  NN
Sbjct:   30 PLMYPQKSYYYSTIGIDLVLRFLWVSTLVPPDSGA-----SFALPEYLTALVMMLELSRRTLWGFFRLENEHRNN 99          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: F0WM75_9STRA (Uncharacterized protein AlNc14C153G7578 n=2 Tax=Albugo TaxID=65356 RepID=F0WM75_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.930e-13
Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    7 VYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            VYY+AI ADL LRF+W  SL+PP         S TLP+++     V EL RRT W FFRLENE + N
Sbjct:  590 VYYVAIVADLFLRFSWTLSLVPPNT-------SRTLPLYLQPFTMVLELFRRTFWSFFRLENEHLRN 649          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A5D6XES5_9STRA (EXS domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XES5_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.410e-12
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    7 VYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            VYY+AI ADL LRF W  SL+PP  + +       LP+++     V EL RRT W FFRLENE + N
Sbjct:  214 VYYVAIVADLFLRFAWTLSLVPPQSSRM-------LPLYLQPFTMVAELFRRTFWSFFRLENEHLRN 273          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A7R9W349_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W349_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.480e-12
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    8 YYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            YY  +AADL+LRF W+ SLIPP            LP ++T I    ELLRRT+WGFFRLENE  +N
Sbjct:   20 YYGVMAADLILRFMWVQSLIPPSSGGW-----IELPAYLTAINMSVELLRRTLWGFFRLENEHRSN 80          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A8J9THD5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9THD5_PHATR)

HSP 1 Score: 65.5 bits (158), Expect = 4.070e-12
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    7 VYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            +YY+ IA DL+LRF W+ +L+PP         S  LP ++T +  + EL RRT+WGF RLENE  +N
Sbjct:   38 MYYLIIAVDLVLRFAWVLTLVPPQSGA-----SFALPQYLTAVSMLLELFRRTIWGFLRLENEHRSN 99          
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Match: A0A7S3EQK1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQK1_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 6.000e-12
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    6 QVYYIAIAADLMLRFNWLYSLIPPGHNP---LPFIHSSTLPIFVTTIVTVCELLRRTMWGFFRLENEQINN 73
            + YY+AI  D  LRF+WL +L+  G+     L F+      + + T++ + E+ RRTMWGFFRLENE + N
Sbjct:  615 EYYYLAIVTDFFLRFSWLLTLVGAGNAKYLGLSFLPEGNAVVLLQTVIEIAEVFRRTMWGFFRLENEHLRN 685          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig490.12058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYB6_9PHAE1.980e-3176.47EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YP28_9STRA1.230e-1759.09EXS family-domain-containing protein n=1 Tax=Tribo... [more]
A0A835ZE89_9STRA7.990e-1756.72EXS family-domain-containing protein n=1 Tax=Tribo... [more]
A0A2D4BK39_PYTIN1.180e-1455.22Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1E7FCK4_9STRA1.770e-1348.00EXS-domain-containing protein (Fragment) n=1 Tax=F... [more]
F0WM75_9STRA1.930e-1352.24Uncharacterized protein AlNc14C153G7578 n=2 Tax=Al... [more]
A0A5D6XES5_9STRA2.410e-1249.25EXS domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A7R9W349_9STRA3.480e-1253.03Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A8J9THD5_PHATR4.070e-1246.27Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S3EQK1_9RHOD6.000e-1242.25Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004342EXS, C-terminalPFAMPF03124EXScoord: 5..71
e-value: 1.6E-17
score: 63.9
IPR004342EXS, C-terminalPROSITEPS51380EXScoord: 1..73
score: 11.602
NoneNo IPR availablePANTHERPTHR10783XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATEDcoord: 6..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig490contigH-paniculata_contig490:2702..2920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig490.12058.1mRNA_H-paniculata_contig490.12058.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig490 2702..2920 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig490.12058.1 ID=prot_H-paniculata_contig490.12058.1|Name=mRNA_H-paniculata_contig490.12058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
PFLLPQVYYIAIAADLMLRFNWLYSLIPPGHNPLPFIHSSTLPIFVTTIV
TVCELLRRTMWGFFRLENEQINN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004342EXS_C