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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1267 |
| Cds size | 1077 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4893.12044.1 >prot_H-paniculata_contig4893.12044.1 ID=prot_H-paniculata_contig4893.12044.1|Name=mRNA_H-paniculata_contig4893.12044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=359bp
MKRARSSGVGLRELVDLRVPVDIAASNSDSPPPRGALHTARSTGCSTKTI
LLPPSSVQSMRPIPPPLQTGVPATHHPEAAATSAAVEAYCPSPEAKRRSS
AYPSLSSSGLNGALRVVTPNKVKASRSRTITSGGGGGRENNSNCGLGMGI
VGESGGTTTANCRSSAVSDTSSRDGEMPLRVAVTALGSGRIADNRGSISG
QGVSVVGTASVTARGTDKSNRRSSASRSVSSGSSSTSNGGGGGGAGNPGA
CSSDSLAAAVVAPGPPAVSVMLGGAVRELAARRVSAKGSSGRVSGSGGGG
AAGGEGGKRSRDERASSSSAGNIHANGSSKRANSRSSSESTGSTGSGGDR
APSVSARTR back to topmRNA from alignment at H-paniculata_contig4893:2180..3707+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4893.12044.1 ID=mRNA_H-paniculata_contig4893.12044.1|Name=mRNA_H-paniculata_contig4893.12044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1528bp|location=Sequence derived from alignment at H-paniculata_contig4893:2180..3707+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGAGTACCGACGAGCTGTGAGGGTATACTTGTTTGTATGTAAAGCGTT
CTTGGGAGGAGGAGGTTACATCACGTGGCGTCAAGTTCTGGACGAAAGAG
CTTCGGTACCACCATACATACCGTGTGGATAGCGTGAGAAAGGAAGGGAG
GAAGGAAAGGAGAGCCGATCACACAGGAGGTTGAGGACATGAAGCGCGCG
CGAAGGTGAAAAATAGAGCAACGGAAGGAGTAAGTTTGGCAGCAGGTGAA
AAGTATATGGCGCACGCTGGCCGAAGGTAGAGTGCTAGGTGTGCCCATCC
CAATGGACCAGGTGCCAAGAATAACCTCGTTCCCTGGTTGTAAGTCTAGT
TTACCTACCTAACAACAACCCACTCAACTGTCTCTCTTGATACACTCTGC
CCACTGGACTGCATTGGACTGGACTGCTCTGTCGTACCTGACATGCATGC
GGTCCTCCGCCACAACAGTAGCGGGGTCGGCCTGCGCGAGCTCGTAGATC
TGCGCGTGCCCGTGGACATCGCGGCGAGCAACAGCGACTCTCCGCCCCCT
CGTGGCGCATTGCATACTGCACGCAGCACGGGCTGCAGCACCAAAACAAT
ACTGCTGCCGCCCTCCTCAGTGCAGTCAATGAGACCCATCCCGCCTCCCC
TGCAAACCGGCGTCCCTGCAACGCACCACCCCGAAGCGGCGGCGACGTCG
GCGGCGGTCGAGGCGTACTGCCCCTCACCGGAAGCAAAGCGCCGATCATC
GGCATATCCCTCTCTGTCCTCCTCCGGTCTCAACGGTGCTTTGCGGGTGG
TCACCCCAAACAAAGTCAAGGCTTCGCGCTCGAGGACCATTACCAGCGGC
GGCGGGGGCGGCCGAGAGAACAACAGCAACTGTGGGCTGGGTATGGGTAT
TGTGGGTGAAAGCGGTGGCACGACAACAGCCAACTGTCGGAGTAGCGCCG
TGAGCGACACCAGCAGCAGGGACGGCGAAATGCCTCTGCGAGTGGCAGTC
ACTGCTCTTGGCTCCGGCCGCATAGCCGACAACCGAGGCAGTATCTCGGG
GCAAGGCGTCTCCGTTGTTGGGACGGCTAGCGTAACGGCACGAGGCACGG
ACAAGAGCAACCGCCGCAGTTCAGCAAGCCGCTCAGTAAGCAGCGGTAGT
AGTAGCACCAGCAACGGGGGCGGCGGCGGTGGGGCTGGTAATCCCGGAGC
TTGTTCATCTGATTCGCTTGCGGCTGCTGTCGTTGCGCCCGGCCCACCAG
CAGTGTCTGTCATGTTGGGAGGCGCGGTTAGGGAGCTCGCCGCGCGCCGC
GTGAGTGCTAAAGGTAGCAGTGGTAGGGTTAGTGGTAGCGGCGGGGGTGG
TGCCGCAGGGGGTGAGGGTGGAAAGCGATCTCGAGACGAACGCGCGTCCT
CGAGCAGCGCCGGGAATATTCACGCCAATGGCAGCAGCAAACGCGCTAAC
AGCAGGTCGAGCAGCGAGAGTACCGGAAGCACCGGGAGCGGCGGAGACAG
GGCACCGTCTGTCTCGGCTAGGACGCGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig4893:2180..3707+ >mRNA_H-paniculata_contig4893.12044.1 ID=mRNA_H-paniculata_contig4893.12044.1|Name=mRNA_H-paniculata_contig4893.12044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at H-paniculata_contig4893:2180..3707+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCGCGCGCGAAGATGAAGCGCGCGCGAAGTAGCGGGGTCGGCCTG
CGCGAGCTCGTAGATCTGCGCGTGCCCGTGGACATCGCGGCGAGCAACAG
CGACTCTCCGCCCCCTCGTGGCGCATTGCATACTGCACGCAGCACGGGCT
GCAGCACCAAAACAATACTGCTGCCGCCCTCCTCAGTGCAGTCAATGAGA
CCCATCCCGCCTCCCCTGCAAACCGGCGTCCCTGCAACGCACCACCCCGA
AGCGGCGGCGACGTCGGCGGCGGTCGAGGCGTACTGCCCCTCACCGGAAG
CAAAGCGCCGATCATCGGCATATCCCTCTCTGTCCTCCTCCGGTCTCAAC
GGTGCTTTGCGGGTGGTCACCCCAAACAAAGTCAAGGCTTCGCGCTCGAG
GACCATTACCAGCGGCGGCGGGGGCGGCCGAGAGAACAACAGCAACTGTG
GGCTGGGTATGGGTATTGTGGGTGAAAGCGGTGGCACGACAACAGCCAAC
TGTCGGAGTAGCGCCGTGAGCGACACCAGCAGCAGGGACGGCGAAATGCC
TCTGCGAGTGGCAGTCACTGCTCTTGGCTCCGGCCGCATAGCCGACAACC
GAGGCAGTATCTCGGGGCAAGGCGTCTCCGTTGTTGGGACGGCTAGCGTA
ACGGCACGAGGCACGGACAAGAGCAACCGCCGCAGTTCAGCAAGCCGCTC
AGTAAGCAGCGGTAGTAGTAGCACCAGCAACGGGGGCGGCGGCGGTGGGG
CTGGTAATCCCGGAGCTTGTTCATCTGATTCGCTTGCGGCTGCTGTCGTT
GCGCCCGGCCCACCAGCAGTGTCTGTCATGTTGGGAGGCGCGGTTAGGGA
GCTCGCCGCGCGCCGCGTGAGTGCTAAAGGTAGCAGTGGTAGGGTTAGTG
GTAGCGGCGGGGGTGGTGCCGCAGGGGGTGAGGGTGGAAAGCGATCTCGA
GACGAACGCGCGTCCTCGAGCAGCGCCGGGAATATTCACGCCAATGGCAG
CAGCAAACGCGCTAACAGCAGGTCGAGCAGCGAGAGTACCGGAAGCACCG
GGAGCGGCGGAGACAGGGCACCGTCTGTCTCGGCTAGGACGCGCTAGCGG
GGTCGGCCTGCGCGAGCTCGTAGATCTGCGCGTGCCCGTGGACATCGCGG
CGAGCAACAGCGACTCTCCGCCCCCTCGTGGCGCATTGCATACTGCACGC
AGCACGGGCTGCAGCACCAAAACAATACTGCTGCCGCCCTCCTCAGTGCA
GTCAATGAGACCCATCCCGCCTCCCCTGCAAACCGGCGTCCCTGCAACGC
ACCACCCCGAAGCGGCGGCGACGTCGGCGGCGGTCGAGGCGTACTGCCCC
TCACCGGAAGCAAAGCGCCGATCATCGGCATATCCCTCTCTGTCCTCCTC
CGGTCTCAACGGTGCTTTGCGGGTGGTCACCCCAAACAAAGTCAAGGCTT
CGCGCTCGAGGACCATTACCAGCGGCGGCGGGGGCGGCCGAGAGAACAAC
AGCAACTGTGGGCTGGGTATGGGTATTGTGGGTGAAAGCGGTGGCACGAC
AACAGCCAACTGTCGGAGTAGCGCCGTGAGCGACACCAGCAGCAGGGACG
GCGAAATGCCTCTGCGAGTGGCAGTCACTGCTCTTGGCTCCGGCCGCATA
GCCGACAACCGAGGCAGTATCTCGGGGCAAGGCGTCTCCGTTGTTGGGAC
GGCTAGCGTAACGGCACGAGGCACGGACAAGAGCAACCGCCGCAGTTCAG
CAAGCCGCTCAGTAAGCAGCGGTAGTAGTAGCACCAGCAACGGGGGCGGC
GGCGGTGGGGCTGGTAATCCCGGAGCTTGTTCATCTGATTCGCTTGCGGC
TGCTGTCGTTGCGCCCGGCCCACCAGCAGTGTCTGTCATGTTGGGAGGCG
CGGTTAGGGAGCTCGCCGCGCGCCGCGTGAGTGCTAAAGGTAGCAGTGGT
AGGGTTAGTGGTAGCGGCGGGGGTGGTGCCGCAGGGGGTGAGGGTGGAAA
GCGATCTCGAGACGAACGCGCGTCCTCGAGCAGCGCCGGGAATATTCACG
CCAATGGCAGCAGCAAACGCGCTAACAGCAGGTCGAGCAGCGAGAGTACC
GGAAGCACCGGGAGCGGCGGAGACAGGGCACCGTCTGTCTCGGCTAGGAC
GCGC back to top
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