prot_H-paniculata_contig48929.12043.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48929.12043.1
Unique Nameprot_H-paniculata_contig48929.12043.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length337
Homology
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BLAST of mRNA_H-paniculata_contig48929.12043.1 vs. uniprot
Match: UPI000C1D0071 (uncharacterized protein LOC111370921 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0071)

HSP 1 Score: 53.5 bits (127), Expect = 7.460e-5
Identity = 35/107 (32.71%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:  216 PKPKAMTAVTDDRKII---DNPAVLGEKERWNSDTSATHHMALDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVSHLGGKSRVSKLNRVAYVPELGRNLIS 319
            P P      TD  K +   + P + G+ + W  D+  T HM L +  F +    L G   ++ N     + G G+L LL+S+    + + +L++V YVPEL RNLIS
Sbjct:   62 PNPCLPLQNTDGSKSVVCKNGPDIQGDPKEWVLDSGCTFHMCLIKNWFIELVD-LSGGQVQMGNDMSCQIRGTGKLNLLLSN----NYILELDKVRYVPELKRNLIS 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48929.12043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000C1D00717.460e-532.71uncharacterized protein LOC111370921 n=1 Tax=Olea ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 201..217
e-value: 0.011
score: 23.3
coord: 139..155
e-value: 2.5
score: 8.8
coord: 170..186
e-value: 1.2
score: 10.8
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 202..217
e-value: 0.0044
score: 17.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 171..184
score: 8.977
NoneNo IPR availableGENE3D4.10.60.10coord: 165..227
e-value: 1.1E-6
score: 30.4
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..110
e-value: 5.4E-14
score: 52.0
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 130..224
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 169..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48929contigH-paniculata_contig48929:153..1217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48929.12043.1mRNA_H-paniculata_contig48929.12043.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48929 153..1217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48929.12043.1 ID=prot_H-paniculata_contig48929.12043.1|Name=mRNA_H-paniculata_contig48929.12043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp
MALKIVQSTELSSEAWRKLQKHYRARGLKEKSRLLHEFNSSRMEPGEEST
KFLLRVDRVANDLERLGRTVDEDDRNLATVKGLTPEYDIERRMIESSDNA
PNRALIGTIITNQYNRLERQKVEAGAKTLAVTMKGAAETCQLCHKLVHTA
PQCRGGQRAPSNIKEKFDGNCSHCGKHGHRGEDCWGAKGGDQKKKRKDRG
LCWVCRSPEHIARRCPKPKAMTAVTDDRKIIDNPAVLGEKERWNSDTSAT
HHMALDETGFEDYTPALPGTMCEIANGTFVPVAGWGRLVLLVSHLGGKSR
VSKLNRVAYVPELGRNLISTRRATDTPGKTFVYSANK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf