mRNA_H-paniculata_contig4892.12039.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4892.12039.1
Unique NamemRNA_H-paniculata_contig4892.12039.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A835ZB15_9STRA (Cytoplasmic dynein 2 heavy chain 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB15_9STRA)

HSP 1 Score: 388 bits (996), Expect = 4.700e-125
Identity = 201/309 (65.05%), Postives = 236/309 (76.38%), Query Frame = 1
Query:    4 VGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLF--QPNEWQLFTGQLGSATTAA--------NGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAIRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            +G RLARL PAL IRVL+FVGR LFK DR  FALHLVHGM PDLF  +  EW +F+GQL  A TAA         GGRPRG P WA+ DR EA+   AEHLP LVQ+ +L+D  +W+RW  SPECE DFP    LT FQRVLLVQ        SAL QFA+E L V SL+PP + L  ++ +ES A +P+L+ T++GADP KE+EELAE+ VGR RYQ+VAMGGGQQE+AV+LLRAAAQAGDW+CLKNLHLVVAWLP+LEKELS+L+  P FRLWLTTEPH  FPP+LLQ +LKVTFESPPGIKKN+QR
Sbjct:  142 LGQRLARLAPALVIRVLHFVGRALFKGDRVAFALHLVHGMKPDLFDAEGTEWSVFSGQL--AVTAAAVEGEGGRRGGRPRGMPDWAADDRAEAYLRFAEHLPRLVQSLELQDRNKWQRWAQSPECELDFPTTARLTPFQRVLLVQ--------SALLQFASEALGVPSLNPPQRPLAVLYAEESEATMPILISTSAGADPCKELEELAEKEVGRDRYQEVAMGGGQQEVAVTLLRAAAQAGDWLCLKNLHLVVAWLPALEKELSALKPQPSFRLWLTTEPHAAFPPVLLQSALKVTFESPPGIKKNLQR 440          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A7S3UWF6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF6_HETAK)

HSP 1 Score: 387 bits (994), Expect = 1.090e-124
Identity = 184/299 (61.54%), Postives = 233/299 (77.93%), Query Frame = 1
Query:    4 VGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAIRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            V +RL RL PAL+ RVLY+VGR LFK DR  FALHL+HG+HPD FQ  EW  FTG L    +  N    R FPPWA+ DR  AF+ L EH P L+Q  DL    +W+RW TSPECE+DFP +R ++ FQRV++VQ LRPDRLQSA+ QF  E+L V SLSPP Q+ + +++ E S ++P+L+VTT+GADPS+E+EE A R VG+ RY+ +AMGGGQQEIA++LLR+AA +GDW+CL+NLHLVVAWLP+LEKE++ L+ H DFRL+LT+E H  FPP+LLQQSLK+TFESPPGIKKN+QR
Sbjct:  204 VQERLERLTPALEKRVLYYVGRALFKADRAMFALHLIHGVHPDQFQDKEWDYFTGTLVGGLSEGN---VRDFPPWAASDRGAAFSALQEHFPNLIQNLDLGSQSKWQRWATSPECEKDFPNLRGISAFQRVMVVQTLRPDRLQSAIFQFCQEILNVPSLSPPPQTFDNLYENELSNELPLLIVTTTGADPSQEIEEFAARCVGKDRYKGLAMGGGQQEIALTLLRSAASSGDWLCLQNLHLVVAWLPTLEKEINQLKPHKDFRLFLTSEAHHKFPPILLQQSLKMTFESPPGIKKNMQR 499          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 4.480e-117
Identity = 187/230 (81.30%), Postives = 208/230 (90.43%), Query Frame = 1
Query:    4 VGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAIRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQA 693
            VGDRLARL PALQIRVLYFVGR L KEDRPTFALHLVHGM+P LFQPNEW++FTGQLGS    +  GRPRGFPPWASPDREEAF LLAE+LP LVQA+DL D  RW+RW TSPECER+FP IRS++ FQRVLLVQALRPDRLQSALHQFA +VLRV+SLSPPA SLEQ++QQE+SA IP+LL+TTSGADP +EMEELAERTVGRGRYQ+VAMGGGQQEIAV+LLR+AAQA
Sbjct: 3094 VGDRLARLTPALQIRVLYFVGRALLKEDRPTFALHLVHGMNPHLFQPNEWEVFTGQLGSVAGVSEAGRPRGFPPWASPDREEAFGLLAEYLPHLVQAADLADAERWRRWATSPECEREFPNIRSVSLFQRVLLVQALRPDRLQSALHQFACDVLRVTSLSPPALSLEQLYQQEASATIPILLITTSGADPGREMEELAERTVGRGRYQEVAMGGGQQEIAVTLLRSAAQA 3323          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A812RCH9_SYMMI (DYNC2H1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RCH9_SYMMI)

HSP 1 Score: 373 bits (957), Expect = 3.640e-116
Identity = 182/300 (60.67%), Postives = 231/300 (77.00%), Query Frame = 1
Query:    1 AVGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAIRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            +  +RL  L   L+IR LYF+GR LFK+DRP FALHLV GMH + FQP EW +FTG L ++      G P+GFP WA  DR+ AF L+AEHLP LV + +LE T +W+R+ +S E ERDF  ++ ++HFQ+VL+VQA RPDRLQSAL  F  +VLR+ SLSPPA SL ++   ES    P+LL+++ GADPSKE++E A +TVG G+Y+++AMGGGQQ+IA+ +LR AAQ G W+CLKNLHLVVAWLP+LEKELSSLQ HPDFRLWLT+E H  FP +LLQ+SLK TFESPPG+KKN+QR
Sbjct:  965 STDERLQLLSADLEIRCLYFIGRALFKQDRPMFALHLVKGMHAEHFQPKEWDIFTGTLVASVVE---GVPKGFPSWAPSDRQNAFRLIAEHLPHLVHSLELESTSKWQRFASSLEAERDFQPLKGISHFQKVLIVQAFRPDRLQSALLHFCCDVLRIDSLSPPAMSLHELHA-ESHTLSPLLLLSSPGADPSKELQEYAAKTVGMGQYEELAMGGGQQDIALHMLRTAAQDGSWICLKNLHLVVAWLPTLEKELSSLQPHPDFRLWLTSEQHHAFPSILLQESLKATFESPPGVKKNLQR 1260          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A2D4BI83_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI83_PYTIN)

HSP 1 Score: 328 bits (842), Expect = 1.200e-103
Identity = 165/306 (53.92%), Postives = 218/306 (71.24%), Query Frame = 1
Query:   10 DRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAIRS---------LTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            DR+ RLIP L+ +VL FVGR LFKE RP F +H+VHGMHP+ F+ +E+ +F G   + ++ ++   P   P WASP+R+EAF  L E LP L Q    + T  W RW+ SPECE+ F A            L+ FQ+VL+VQALRPDRLQSA+ QF   V+ + SL+PP    + I   E++   PVLL+TT+GADPSKE+EE+A   VG+  Y +VAMGGGQQE A+SLL++ A+ G+W+CL+NLHLVVAWLP LEKE+++L  H  FRLWLTTEPH+ FP +LL+ S+K+TFESPPG+KKN+QR
Sbjct:    8 DRIYRLIPILEYKVLMFVGRALFKEHRPMFGMHIVHGMHPECFEKHEYDVFCGNAVAQSSGSSASIP--LPEWASPERKEAFGRLVETLPKLAQLCRFDSTDLWIRWSKSPECEQAFHAKMEKSSGSGGGGLSPFQKVLVVQALRPDRLQSAIIQFICGVMSLKSLTPPPLDFKTISTDEATNATPVLLMTTAGADPSKELEEVASAVVGKSHYFEVAMGGGQQEKALSLLKSTAEHGEWLCLQNLHLVVAWLPVLEKEINALTPHHKFRLWLTTEPHDAFPLVLLETSIKITFESPPGLKKNLQR 311          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A7S1CBP3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBP3_9STRA)

HSP 1 Score: 338 bits (866), Expect = 2.600e-102
Identity = 172/302 (56.95%), Postives = 220/302 (72.85%), Query Frame = 1
Query:    1 AVGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAI--RSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            +V +R+ RL+PALQ RVL FVGR LFK DR  FALH VHGM P+LF  +EW    G L     A  G R RGFP WA  DRE  FAL A   P L+   +L D   W+RW  SP  E+++P+   RS+T FQRVL++Q LRPDRL +AL QF  E L V+S++PP  SL  +  +E +A +PVL++TT+GADPSK++EE A + VGR  YQ++AMGGGQQEIAV +LR AAQAGDW+ LKNLHLV  WL +LEKE++S+  +P FRL+LTTE H+ FPP+LLQQSLKVT+E+PPG++KN++R
Sbjct:  975 SVEERIRRLVPALQRRVLVFVGRSLFKADRLMFALHFVHGMLPELFGASEWAYMVGDL----VADLGARARGFPEWAGADRETQFALFASTFPSLLAQLNLGDAS-WERWARSPVAEKEWPSAMGRSVTAFQRVLVIQTLRPDRLVTALRQFVCEALGVTSVAPPPVSLAVLHDEEMTARVPVLMITTTGADPSKDVEEFAAQKVGRAHYQELAMGGGQQEIAVKMLRKAAQAGDWLMLKNLHLVTPWLTTLEKEINSVAANPRFRLFLTTEAHDSFPPILLQQSLKVTYEAPPGLRKNLER 1271          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A482SUX4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUX4_9ARCH)

HSP 1 Score: 337 bits (863), Expect = 8.710e-102
Identity = 162/297 (54.55%), Postives = 224/297 (75.42%), Query Frame = 1
Query:   10 DRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPAIRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            +RL  L+  + +RVLYFVGR LFK DRP FALHLV  MHP+ FQ  EW++FTG L ++ +      P+ +P WA  +R++AF LL+E LP LV A +L++  +W+R+ TS E ERD P++R ++ FQ+VL++QA RPDRLQSA+ QF  ++LR+ S+SPP  +L  +F+ E++  +P+LL+++ GAD SKE++E A +TVG G Y+++AMGGGQQ++A+ +LR AA AG W+CLKNLHLVVAWLP LEKEL+++  H DFRL LT+E H  F  +LLQ SLK TFESPPG+KKN+QR
Sbjct: 1873 ERLNLLVVDMNVRVLYFVGRALFKADRPMFALHLVREMHPEHFQAKEWEVFTGALVASVSEVV---PKSYPTWAPSERKDAFRLLSEQLPHLVNALELDNNAKWQRFATSLEAERDLPSLRGMSPFQKVLVMQAFRPDRLQSAILQFCMDMLRIDSISPPPIALSALFE-ETTPHVPLLLISSPGADASKELQEYAAKTVGAGNYEELAMGGGQQDVALHMLRTAATAGSWLCLKNLHLVVAWLPKLEKELAAITPHDDFRLILTSESHPHFTSILLQSSLKATFESPPGVKKNLQR 2165          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A0P1AJ37_PLAHL (Dynein heavy chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ37_PLAHL)

HSP 1 Score: 336 bits (862), Expect = 1.250e-101
Identity = 167/304 (54.93%), Postives = 224/304 (73.68%), Query Frame = 1
Query:   10 DRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFP-------AIRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            DR+ RLIP L+ +VL FVGR LFKE RP F +HLVHGMHP+ F+ NE++ F G++   T    GG  + FP WASP+R+EAF  L E LP L Q    +    W RW+ + ECE+ F        ++  L+ FQ++L+VQALRPDRLQSA+ QF   V+++ SL+PP+   + I  +E++  IPVLL+TT+GADPSKE+EE+A   VG+G Y +VAMGGGQQ+ A+SLL++ A+ G+W+CL+NLHLV+AWLP LEKE+S+L  +  FRLWLTTEPH+ FP +LL+QSLK+TFESPPG+KKN+QR
Sbjct: 3606 DRILRLIPILEHKVLMFVGRALFKEHRPMFGMHLVHGMHPECFERNEYEFFCGEV-VETERGLGGHTK-FPEWASPERKEAFTQLVEALPRLAQLCKFDSHDLWIRWSKAMECEQSFHPKMEKSGSVGGLSAFQKLLVVQALRPDRLQSAIIQFICNVMQIKSLTPPSLDFKAISTEEATNTIPVLLLTTAGADPSKELEEVATSIVGKGHYFEVAMGGGQQDKAISLLKSTAEHGEWLCLQNLHLVIAWLPVLEKEVSALNANHKFRLWLTTEPHDGFPLVLLEQSLKITFESPPGMKKNLQR 3907          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A8J2SHJ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHJ0_9STRA)

HSP 1 Score: 334 bits (857), Expect = 5.880e-101
Identity = 162/301 (53.82%), Postives = 214/301 (71.10%), Query Frame = 1
Query:    4 VGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPA--IRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            + +RL +L P ++  V ++V RGLFK DR  FALH+VHGMH   FQ  EW+LF G L         GRP   P WA  DR  AF+ ++  L  LV   DL++T RW  W  SPECER+FPA  +R  T FQRVL+ Q  RPDRL + LH FA E+L++S+L+PP+ + +Q+ +QE+ A++P+LL+TT+GADPSKE+ + +   VGR R++ +AMGGG  ++A+SLLR  +  GDW+CL+NLHLVVAWLP LEK L+ +  H DFRLWLTTEPH  FP +LLQ+SLKVTFESPPG K+N+QR
Sbjct: 4188 LAERLQQLTPLIERLVFFYVSRGLFKADRCMFALHVVHGMHKKHFQAGEWELFAG-LTPTKEGVCDGRPLDLPCWAGHDRMAAFSNMSTQLGALVSELDLKNTTRWSHWAKSPECEREFPAEIMRKCTPFQRVLITQCFRPDRLTTVLHAFACEILQISALAPPSLNFDQLHKQETEANLPILLITTAGADPSKELADFSATVVGRNRFKSLAMGGGTHDLAMSLLRETSSEGDWLCLQNLHLVVAWLPLLEKALAVISAHEDFRLWLTTEPHTAFPHVLLQKSLKVTFESPPGTKRNMQR 4487          
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Match: A0A5D6XL42_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL42_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.280e-99
Identity = 166/304 (54.61%), Postives = 218/304 (71.71%), Query Frame = 1
Query:   10 DRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNEWQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASDLEDTGRWKRWTTSPECERDFPA-------IRSLTHFQRVLLVQALRPDRLQSALHQFANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAERTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSLEKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR 900
            DR+ RLIP L+++VL FVGR LFKE R  F LHLVHGMHP+ F+ NE++ F G+  +++  A G      P WAS +R+EAFAL  E LP L Q    +    W RW  S ECE+ F A          L+ FQ++L+VQALRPDRLQSA+ QF   V+++ SL+PP    + +  +E+S   PVLL+TT+GADPSKE+EE+A   VG+  Y +VAMGGGQQE A+SLL++ A+ G+W+CL+NLHLVVAWLP+LEKE++ L  H  FRLWLTTEPH+ FP +LL+QS+K+TFESPPG+KKN+QR
Sbjct: 3177 DRILRLIPILELKVLMFVGRALFKEHRTMFGLHLVHGMHPECFETNEYEFFCGEAVASSERAGGSAA--LPEWASLERKEAFALFVETLPRLAQQCKFDSHDLWVRWAKSSECEQGFHAKMDKSGSAGGLSAFQKLLVVQALRPDRLQSAIVQFVCGVMQLKSLTPPPLDFKDVATEEASNATPVLLLTTAGADPSKELEEVASAVVGKSHYFEVAMGGGQQEKALSLLKSTAEHGEWLCLQNLHLVVAWLPTLEKEINVLAPHHKFRLWLTTEPHDAFPLVLLEQSIKITFESPPGMKKNLQR 3478          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4892.12039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB15_9STRA4.700e-12565.05Cytoplasmic dynein 2 heavy chain 1-like protein n=... [more]
A0A7S3UWF6_HETAK1.090e-12461.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LN02_ECTSI4.480e-11781.30Dynein heavy chain dynein heavy chain n=1 Tax=Ecto... [more]
A0A812RCH9_SYMMI3.640e-11660.67DYNC2H1 protein n=1 Tax=Symbiodinium microadriatic... [more]
A0A2D4BI83_PYTIN1.200e-10353.92Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S1CBP3_9STRA2.600e-10256.95Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A482SUX4_9ARCH8.710e-10254.55Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A0P1AJ37_PLAHL1.250e-10154.93Dynein heavy chain n=1 Tax=Plasmopara halstedii Ta... [more]
A0A8J2SHJ0_9STRA5.880e-10153.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5D6XL42_9STRA1.280e-9954.61Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4892contigH-paniculata_contig4892:6034..9304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.1
Seed ortholog evalue2.4e-103
Seed eggNOG ortholog2880.D8LN02
Preferred nameDYNC2H1
KEGG koko:K05636,ko:K10414
KEGG Pathwayko04145,ko04151,ko04510,ko04512,ko04962,ko05132,ko05145,ko05146,ko05165,ko05200,ko05222,map04145,map04151,map04510,map04512,map04962,map05132,map05145,map05146,map05165,map05200,map05222
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001568,GO:0001578,GO:0001944,GO:0002119,GO:0002164,GO:0003002,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005858,GO:0005868,GO:0005874,GO:0005875,GO:0005929,GO:0005930,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007030,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0007600,GO:0007605,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0007626,GO:0007628,GO:0007635,GO:0007638,GO:0008049,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008569,GO:0008589,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009799,GO:0009855,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010256,GO:0010467,GO:0010646,GO:0010647,GO:0010648,GO:0010970,GO:0010996,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016485,GO:0016545,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017015,GO:0017111,GO:0019098,GO:0019538,GO:0019953,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022414,GO:0022607,GO:0022611,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030286,GO:0030326,GO:0030512,GO:0030534,GO:0030705,GO:0030900,GO:0030990,GO:0031223,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035721,GO:0035735,GO:0036156,GO:0036159,GO:0040024,GO:0042073,GO:0042221,GO:0042623,GO:0042995,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044458,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045177,GO:0045184,GO:0045433,GO:0045503,GO:0045505,GO:0045880,GO:0046907,GO:0048065,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048609,GO:0048699,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051959,GO:0055115,GO:0060173,GO:0060179,GO:0060271,GO:0060322,GO:0060976,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061512,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0072358,GO:0072359,GO:0072594,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090659,GO:0097014,GO:0097542,GO:0097730,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902494,GO:1903844,GO:1903845,GO:1905515,GO:1990939,GO:2000026
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04516,ko04812
Exons7
Model size904
Cds size900
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930445.184857-CDS-H-paniculata_contig4892:6033..60751622930445.184857-CDS-H-paniculata_contig4892:6033..6075Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 6034..6075 +
1691481295.5319374-CDS-H-paniculata_contig4892:6033..60751691481295.5319374-CDS-H-paniculata_contig4892:6033..6075Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 6034..6075 +
1622930445.2001503-CDS-H-paniculata_contig4892:6267..63691622930445.2001503-CDS-H-paniculata_contig4892:6267..6369Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 6268..6369 +
1691481295.5445983-CDS-H-paniculata_contig4892:6267..63691691481295.5445983-CDS-H-paniculata_contig4892:6267..6369Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 6268..6369 +
1622930445.2191584-CDS-H-paniculata_contig4892:6993..71661622930445.2191584-CDS-H-paniculata_contig4892:6993..7166Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 6994..7166 +
1691481295.553854-CDS-H-paniculata_contig4892:6993..71661691481295.553854-CDS-H-paniculata_contig4892:6993..7166Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 6994..7166 +
1622930445.2370365-CDS-H-paniculata_contig4892:7781..79931622930445.2370365-CDS-H-paniculata_contig4892:7781..7993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 7782..7993 +
1691481295.5629907-CDS-H-paniculata_contig4892:7781..79931691481295.5629907-CDS-H-paniculata_contig4892:7781..7993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 7782..7993 +
1622930445.2631104-CDS-H-paniculata_contig4892:8183..83441622930445.2631104-CDS-H-paniculata_contig4892:8183..8344Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 8184..8344 +
1691481295.5717926-CDS-H-paniculata_contig4892:8183..83441691481295.5717926-CDS-H-paniculata_contig4892:8183..8344Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 8184..8344 +
1622930445.2772977-CDS-H-paniculata_contig4892:8833..89981622930445.2772977-CDS-H-paniculata_contig4892:8833..8998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 8834..8998 +
1691481295.582783-CDS-H-paniculata_contig4892:8833..89981691481295.582783-CDS-H-paniculata_contig4892:8833..8998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 8834..8998 +
1622930445.2949085-CDS-H-paniculata_contig4892:9257..93021622930445.2949085-CDS-H-paniculata_contig4892:9257..9302Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 9258..9302 +
1691481295.590717-CDS-H-paniculata_contig4892:9257..93021691481295.590717-CDS-H-paniculata_contig4892:9257..9302Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4892 9258..9302 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4892.12039.1prot_H-paniculata_contig4892.12039.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4892 6034..9302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4892.12039.1

>prot_H-paniculata_contig4892.12039.1 ID=prot_H-paniculata_contig4892.12039.1|Name=mRNA_H-paniculata_contig4892.12039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
AVGDRLARLIPALQIRVLYFVGRGLFKEDRPTFALHLVHGMHPDLFQPNE
WQLFTGQLGSATTAANGGRPRGFPPWASPDREEAFALLAEHLPLLVQASD
LEDTGRWKRWTTSPECERDFPAIRSLTHFQRVLLVQALRPDRLQSALHQF
ANEVLRVSSLSPPAQSLEQIFQQESSADIPVLLVTTSGADPSKEMEELAE
RTVGRGRYQDVAMGGGQQEIAVSLLRAAAQAGDWVCLKNLHLVVAWLPSL
EKELSSLQLHPDFRLWLTTEPHEDFPPLLLQQSLKVTFESPPGIKKNVQR
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mRNA from alignment at H-paniculata_contig4892:6034..9304+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4892.12039.1 ID=mRNA_H-paniculata_contig4892.12039.1|Name=mRNA_H-paniculata_contig4892.12039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3271bp|location=Sequence derived from alignment at H-paniculata_contig4892:6034..9304+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGTTGGAGATCGACTGGCCCGGCTCATCCCAGCCTTGCAGGTGCGCGT GTAGGTTCGCTGTTAGGGTTCCCATCATGGATGGTACACCCGATCATGGC GTAAACATACACACACACACACACACACATATATATATGGAGAGCCTGGT GTATGGAATGCATAGATATATGACGCGTCTGTTTTTGTGTGCTGATTGTT TCCTTATTGACTTTCTCTCCTCTTCGCGTCAAAGATTCGAGTTCTGTACT TCGTTGGACGAGGTCTTTTCAAGGAAGACCGCCCAACGTTCGCGCTGCAC CTGGTTCACGGAATGCATCCCGATCTTTTCCAGCCGGTGAGCATCCACGG AAAATAGTGTACTTTATCCGCACAACACATCTCAACAGGGACCGTGGTAA GTAGACCTGAGAACAAGTGCTTTGCAATATCGAACACATATTCAGTATTG TACTGTGATCGCTGACGTGCTGTTGAACACTCAAATACGAATGGGCTGTC CTTGATGCTTTTCTGCAGACAGCAAAGTCCACAGGTATACTTTGAAAGGG CTGCAAACAATCGCTCTCATTCTGAGCTCGCGCAGAAGTTCTGTCGTTTA CTGAAGAAAATCTATGACAATAACGAAATATATATATTCTGCTAAACGTC GAGTTAAGGTTAATGTTTGGCGAAATATGAGAAGCATTTTTAGCACTGCT CCTCCTCGAACTACTTGACTAAATGTGGAAGAAGCTACATTATGTTAGAC GATTTTGGTTTCCTCTCGACGAGGTGATCACGACCGTCTATATTGCACCC ACCAATTCATGTTTGTCCACAACACATGCGCTGTTAACAATACACACAAT CCTCGGGATGGATCGGTGGAAGCTGAGATATCTGTTTTTCTTGGCTATCG AAACGGCGAACATCCTGTGCTCTCCATTGACTTCGATATACGCTTTTTGC CAATTTCCAGAACGAGTGGCAGCTATTTACCGGTCAGTTGGGATCAGCAA CTACTGCGGCGAATGGCGGTCGTCCCCGGGGTTTCCCCCCGTGGGCCTCG CCCGATCGAGAGGAAGCTTTCGCGCTTTTGGCCGAACATTTGCCCCTACT TGTACAGGCGTCTGATCTTGAGGATACAGGGAGGTTAGTGTACCGAATAG CTGTCGCTCTTTAACCATAAATAGGACTCTGGTAGTTCTTTGCGACAAGA CTTTCTTACTGTAGTTTCCTTTGCTTCGCCGGTACACAGCACAGCGTATG GGAAAATTCTTGGGAGATCGTTAGTCGGTGACATACGAACGTTTTTCGAA ACTCCCGATCTCAAACGCTGCCCGTTGTGGTAATCGAGCTATCGCGTCTG CTATCGTCAATAATATCCAAGACCTCTCAGCTTCGAATTTGCGTTGGCGA CGAAGCCAAGACGCATGTAGTTTGGCGACTGCTATGCCTGCGTTGAAACG ACCGTTGGATAGCTTTTTCGACAAAAATTGTAACAGGGAGGATAAATTGA ACAGCTCGACGAGTTTTAGAGTGTTGTTATACAGGGTATGTCTCGATGAA AGAATTGGCACGCGCATATTTTACACGATACTAGGCCAACGTCGAGTACT GAACAAGGTTACCCTCTATTTTCGGCTTGTTGCCAGCAGTTTTAAATATC GCCAACGCTCATATACAGCCGACAAAAGCATAAAATCTCAAGGTCCGATA TCACAACACAATAGGCAGCGCCCGGTCGCGTCACCTTGCCGACCGCAGGT GGAAGCGATGGACGACATCGCCGGAGTGCGAGCGCGATTTCCCTGCTATA CGATCACTAACGCACTTTCAACGAGTACTACTGGTGCAGGCCTTACGGCC GGACCGTTTGCAGTCGGCCTTGCACCAGTTCGCGAACGAGGTACTTCGAG TCTCATCTCTGTCGCCGCCTGCCCAGTCCTTGGAGCAGATCTTCCAGCAA GAATCCTCGGGTGAGACATGGCACTGTTGCATATGCTTGACAGAATCATC ATAGTACTTCGCCCGTCCACTCGTGCATAGCGTTCAGAGAAACAGGTCAG ACTACAGTAGTATTCTAAACGCACCGATCAGCCACATTGCCTCAATCTAT TGAAGTTCCTGGCAGATCACGCGCAAAATTCTCTAAAATATTTTCTGCAG CGGACATTCCCGTTCTACTGGTCACTACTTCGGGAGCGGATCCTAGCAAG GAGATGGAAGAGTTGGCAGAGAGAACTGTAGGTCGCGGCAGGTACCAAGA TGTGGCGATGGGTGGAGGCCAGCAGGAGATCGCCGTCTCTCTCCTACGAG CAGCGGCTCAGGTAAATACTTGTCGCAAAGAGAGGTTCCGATATAGAGTG AGCTCAGTCAACCCGATAGCAGCCCTGTGGTAAAAAAGACATCATTCAGC ACTCCGGTCTTCGTCGTTTTGCAGCATTACGAATGGCCTTTATGGGGCAC AATGACGAAGCACAGATGCCCCACTAGTACACGTGTCAGCGATTACCACC GAGAGCCTTGACAGTCGACGTACTTGTGGCGTCATGCGGTCTCACACTAT CGGAATCAGCCCCGCGAAGATGGCTCCTTCGAGAGTCCCCTAACTTTAGG CCGTCCGGGTAAGTGTTTGGCGTAGAGTATGACGGTGCAATATGACACGT ATATATGTACTTACCTCGACATAAGCTAGCAGCGGCTACAGAGTGTGCAA GTCGTTACTGGTTGTTTTCTTCTGATGGGCAAGCTCTTCAACGCAGCAGT TCCTCATCCGCCCCAATCTCCAACAATCCCACACTGTGTGCGAAATACAG GCCGGGGACTGGGTTTGTCTCAAGAACTTGCACTTGGTAGTGGCATGGTT GCCATCTCTCGAGAAGGAGCTGAGTTCTCTCCAGCTTCACCCAGACTTTC GACTTTGGCTAACGACAGAGCCGCACGAGGACTTCCCCCCTCTTCTACTG CAGCAGAGTCTCAAGGTAAATGATTTTGTGCTCGCATGGTGTTCATGGCG CGATGGCTACTCCAGTTCAAATGTTCCGTCAGGGCTATTCGTATTCTGCG GGACGGGTATCATATTTTTGGAGACAAAAGAAATCGCCACAGTGTAAGGC TTTCCAGTACCATCGGGCGATACCCAAACCATTTGTCTCTCCCCTTTGGC TGCGTACGCCTCATCGCTATCGGAGGCAACACAGTTCAAGTACGTCAAAC TGCATCATTTGTTTATCCCATCAGGTTACCTTCGAGTCTCCACCCGGAAT AAAGAAAAATGTGCAGAGGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig4892:6034..9304+

>mRNA_H-paniculata_contig4892.12039.1 ID=mRNA_H-paniculata_contig4892.12039.1|Name=mRNA_H-paniculata_contig4892.12039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig4892:6034..9304+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGTTGGAGATCGACTGGCCCGGCTCATCCCAGCCTTGCAGGCAGTTGG
AGATCGACTGGCCCGGCTCATCCCAGCCTTGCAGATTCGAGTTCTGTACT
TCGTTGGACGAGGTCTTTTCAAGGAAGACCGCCCAACGTTCGCGCTGCAC
CTGGTTCACGGAATGCATCCCGATCTTTTCCAGCCGATTCGAGTTCTGTA
CTTCGTTGGACGAGGTCTTTTCAAGGAAGACCGCCCAACGTTCGCGCTGC
ACCTGGTTCACGGAATGCATCCCGATCTTTTCCAGCCGAACGAGTGGCAG
CTATTTACCGGTCAGTTGGGATCAGCAACTACTGCGGCGAATGGCGGTCG
TCCCCGGGGTTTCCCCCCGTGGGCCTCGCCCGATCGAGAGGAAGCTTTCG
CGCTTTTGGCCGAACATTTGCCCCTACTTGTACAGGCGTCTGATCTTGAG
GATACAGGGAGAACGAGTGGCAGCTATTTACCGGTCAGTTGGGATCAGCA
ACTACTGCGGCGAATGGCGGTCGTCCCCGGGGTTTCCCCCCGTGGGCCTC
GCCCGATCGAGAGGAAGCTTTCGCGCTTTTGGCCGAACATTTGCCCCTAC
TTGTACAGGCGTCTGATCTTGAGGATACAGGGAGGTGGAAGCGATGGACG
ACATCGCCGGAGTGCGAGCGCGATTTCCCTGCTATACGATCACTAACGCA
CTTTCAACGAGTACTACTGGTGCAGGCCTTACGGCCGGACCGTTTGCAGT
CGGCCTTGCACCAGTTCGCGAACGAGGTACTTCGAGTCTCATCTCTGTCG
CCGCCTGCCCAGTCCTTGGAGCAGATCTTCCAGCAAGAATCCTCGGGTGG
AAGCGATGGACGACATCGCCGGAGTGCGAGCGCGATTTCCCTGCTATACG
ATCACTAACGCACTTTCAACGAGTACTACTGGTGCAGGCCTTACGGCCGG
ACCGTTTGCAGTCGGCCTTGCACCAGTTCGCGAACGAGGTACTTCGAGTC
TCATCTCTGTCGCCGCCTGCCCAGTCCTTGGAGCAGATCTTCCAGCAAGA
ATCCTCGGCGGACATTCCCGTTCTACTGGTCACTACTTCGGGAGCGGATC
CTAGCAAGGAGATGGAAGAGTTGGCAGAGAGAACTGTAGGTCGCGGCAGG
TACCAAGATGTGGCGATGGGTGGAGGCCAGCAGGAGATCGCCGTCTCTCT
CCTACGAGCAGCGGCTCAGCGGACATTCCCGTTCTACTGGTCACTACTTC
GGGAGCGGATCCTAGCAAGGAGATGGAAGAGTTGGCAGAGAGAACTGTAG
GTCGCGGCAGGTACCAAGATGTGGCGATGGGTGGAGGCCAGCAGGAGATC
GCCGTCTCTCTCCTACGAGCAGCGGCTCAGGCCGGGGACTGGGTTTGTCT
CAAGAACTTGCACTTGGTAGTGGCATGGTTGCCATCTCTCGAGAAGGAGC
TGAGTTCTCTCCAGCTTCACCCAGACTTTCGACTTTGGCTAACGACAGAG
CCGCACGAGGACTTCCCCCCTCTTCTACTGCAGCAGAGTCTCAAGGCCGG
GGACTGGGTTTGTCTCAAGAACTTGCACTTGGTAGTGGCATGGTTGCCAT
CTCTCGAGAAGGAGCTGAGTTCTCTCCAGCTTCACCCAGACTTTCGACTT
TGGCTAACGACAGAGCCGCACGAGGACTTCCCCCCTCTTCTACTGCAGCA
GAGTCTCAAGGTTACCTTCGAGTCTCCACCCGGAATAAAGAAAAATGTGC
AGAGGGTTACCTTCGAGTCTCCACCCGGAATAAAGAAAAATGTGCAGAGG
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