prot_H-paniculata_contig4891.12035.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4891.12035.1
Unique Nameprot_H-paniculata_contig4891.12035.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
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BLAST of mRNA_H-paniculata_contig4891.12035.1 vs. uniprot
Match: A0A6H5JV33_9PHAE (SURF1-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV33_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 4.690e-15
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:    2 PGPRGAPPGMKSSSGGSSMATSPMGDFVYTPIKIKNGPIVLFNRGWAPRAGG 53
            PGPRGAPPGMK++SG SSMA SPMGDFVYTP+K  +G +VL NRGW  R+ G
Sbjct:  212 PGPRGAPPGMKATSGPSSMAPSPMGDFVYTPLKRGDGSVVLVNRGWVSRSKG 263
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BLAST of mRNA_H-paniculata_contig4891.12035.1 vs. uniprot
Match: D7G7I7_ECTSI (SURF1-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I7_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.300e-14
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 0 
Query:    3 GPRGAPPGMKSSSGGSSMATSPMGDFVYTPIKIKNGPIVLFNRGWAPRAGG 53
            GPRGAPPGMK++SG SSMA SPMGDFV+TP+K  +G +VL NRGW PR+ G
Sbjct:  196 GPRGAPPGMKATSGPSSMAPSPMGDFVHTPLKRGDGSVVLVNRGWVPRSKG 246
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4891.12035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV33_9PHAE4.690e-1571.15SURF1-like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D7G7I7_ECTSI1.300e-1470.59SURF1-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002994Surfeit locus 1/Shy1PROSITEPS50895SURF1coord: 1..57
score: 8.566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4891contigH-paniculata_contig4891:577..750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4891.12035.1mRNA_H-paniculata_contig4891.12035.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4891 577..750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4891.12035.1 ID=prot_H-paniculata_contig4891.12035.1|Name=mRNA_H-paniculata_contig4891.12035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MPGPRGAPPGMKSSSGGSSMATSPMGDFVYTPIKIKNGPIVLFNRGWAPR
AGGTGER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002994Surf1/Shy1