prot_H-paniculata_contig489.12034.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig489.12034.1
Unique Nameprot_H-paniculata_contig489.12034.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
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BLAST of mRNA_H-paniculata_contig489.12034.1 vs. uniprot
Match: D7FJI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI4_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.860e-18
Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 0 
Query:   98 GRRWTPPLSPSVGKITTPVSEDVENLPTAGD-FITMLRRPGIPALASVVDLKNAVHAATRSWIRDFRIRGGRSRVNDKLVEMEKIEKELNP--------PKFFRILSKKKRLQAAVEEITAVREELMQVLLFLHLRE 225
            G +WTPPLSP   K      E+ E  PT  +  I +LR  G+P LA +  ++    AA+R+WIRDF IRGGR  VN+K+ EM ++E E           PK F         +    E++ VREELMQ++LFLHLRE
Sbjct:   67 GFKWTPPLSPGNDK------ENAELKPTTPEQAIVLLRTRGLPPLADLKSIRQMAGAASRTWIRDFLIRGGRGCVNEKVREMAQLEMEARKHRPKLALLPKVFGSGKGDLPPRPTPREVSEVREELMQLVLFLHLRE 197
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig489.12034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI4_ECTSI2.860e-1842.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig489contigH-paniculata_contig489:18439..24748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig489.12034.1mRNA_H-paniculata_contig489.12034.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig489 18272..26914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig489.12034.1 ID=prot_H-paniculata_contig489.12034.1|Name=mRNA_H-paniculata_contig489.12034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MTVETRAARNQGDSSTLYWSSKRPMFCVRKPRLFLWPRSKRHIRKLPLEP
GRRQDEEGGREKTAAQSPDSLDSQQKQRELEKPAIFRGLSGDGLSSKGRR
WTPPLSPSVGKITTPVSEDVENLPTAGDFITMLRRPGIPALASVVDLKNA
VHAATRSWIRDFRIRGGRSRVNDKLVEMEKIEKELNPPKFFRILSKKKRL
QAAVEEITAVREELMQVLLFLHLRE*
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