prot_H-paniculata_contig48754.12011.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48754.12011.1
Unique Nameprot_H-paniculata_contig48754.12011.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: R7QK84_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QK84_CHOCR)

HSP 1 Score: 99.4 bits (246), Expect = 1.890e-20
Identity = 69/224 (30.80%), Postives = 111/224 (49.55%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYYNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHIRDLLTVARQ------QSIRLSGKLGVCSACEKGKASKQPIKKYREERTAKP-LELVHTDIVGPVD-KSFGGCRFAIIFVDD 219
            W++DSGC+ H +T  R LF  + Q+    +    K   +V GRG+VE ++            NV +VP+   S LSV +MVS+G++  F +++ R+      +     +  +     I+   N      VV  + LHER+ H+ ++  +A          I       +C AC  GKA++  I K R    A+  L+LVH+D+ GP++ +S GG R+ I FVDD
Sbjct:  275 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQMVSKGLQVSFENEKCRVTAGPTVV----ATASQVGDLYILDVMNETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVNGINSDNHSPICPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDD 492          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: A0A5N6LQL6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LQL6_9ASTR)

HSP 1 Score: 97.4 bits (241), Expect = 9.560e-20
Identity = 71/232 (30.60%), Postives = 121/232 (52.16%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVE-----GLIWTAEGAMR-IIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYYNGIT--IPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHIR-DLLTVARQQSIRLS------GKLGVCSACEKGKASKQPIKKYREERTAKPLELVHTDIVGPVDK-SFGGCRFAIIFVDD 219
            WI+DSGC+ H LT  ++        +++PI   G + + ++     +      +++++EG  + ++  NV++VP    + +SV +M  +G    FG +  R++ N  T  +P     + E  + +       EK +    T+L H+RLGH+  D L++  +Q + +        K GVCS C+ GKA + P K   E + A PLELVHTD+ GPV + S  G +F + F+DD
Sbjct:  376 WIVDSGCSNH-LTGDKER-------LKNPIVYGGSKVVTIDDNSKYQIAHIGDVVFSSEGGKQDLVLKNVYHVPGMRRNLISVSQMTEEGSFVVFGPKDVRVFKNIETSSVPILKGRKSETMYVLNTESAYVEKTKGNQTTELWHQRLGHVGLDKLSLIVKQKLLVGLPNLEVQKDGVCSGCQYGKAIQLPFKSS-EYKAATPLELVHTDVFGPVKQPSIQGLKFMVSFIDD 598          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: R7QC71_CHOCR (Integrase catalytic domain-containing protein n=4 Tax=Chondrus crispus TaxID=2769 RepID=R7QC71_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 3.960e-19
Identity = 71/223 (31.84%), Postives = 112/223 (50.22%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYYNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHIRDLLTVARQQSIRLSGKLG-----VCSACEKGKASKQPIKKYREERTAKP-LELVHTDIVGPVD-KSFGGCRFAIIFVDD 219
            W++DSGC+ H +T  R LF  + Q+    +    K   +V GRG+VE ++            NV +VP+   S LSV ++VS+G++  F +++  L   G T+     +  +     I+   N      VV  + LHER+ H+      +   +  +SG        VC AC  GKA++  I K R    A+  L+LVH+D+ GP++ +S GG R+ I FVDD
Sbjct:  224 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQIVSKGLQVSFENEKC-LVTAGPTLV---ATASQVGDLFILDVMNETFSAHVVTLQTLHERMAHVNVQGIASMIHNNVVSGINSDNHSLVCPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDD 441          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: R7QJV2_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJV2_CHOCR)

HSP 1 Score: 95.1 bits (235), Expect = 5.920e-19
Identity = 69/224 (30.80%), Postives = 109/224 (48.66%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYYNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHIRDLLTVARQ------QSIRLSGKLGVCSACEKGKASKQPIKKYREERTAKP-LELVHTDIVGPVD-KSFGGCRFAIIFVDD 219
            W++DSGC+ H +T  R LF  + Q+    +    K   +V GRG+VE ++            NV +VP+   S LSV +MVS+G++  F +++  +      +         Y    I+   N      VV  + LHER+ H+ ++  +A          I       +C AC  GKA++  I K R    A+  L+LVH+D+ GP++ +S GG R+ I FVDD
Sbjct:  275 WLVDSGCSAH-ITFDRSLFVTYEQMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQMVSKGLQVSFENEKCCVTAGPTVVATASLVGDLY----ILDVMNETFSAHVVTLQTLHERMAHV-NVQGIASMIHNNVVSGINSDNHSPICPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDD 492          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: A0A2K3N9S3_TRIPR (Copia-type polyprotein n=2 Tax=Trifolium TaxID=3898 RepID=A0A2K3N9S3_TRIPR)

HSP 1 Score: 94.7 bits (234), Expect = 8.180e-19
Identity = 69/225 (30.67%), Postives = 116/225 (51.56%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYYN--GITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHI--RDLLTVARQQSIR----LSGKLGVCSACEKGKASKQPIKKYREERTAKPLELVHTDIVGPVD-KSFGGCRFAIIFVDD 219
            W IDSGC+ H +T  ++ F  F    R  +      ++ V GRG+V+      +G + +I  NV+Y+P  S++ LSV ++  +G+   F +   +L++   G+ +  + T  K Y  +  M   N  +   + +T L H+R  H+  + L T+  +Q ++    L      C+ C  GK  +  I K    R +K LELVH+DI GP++ +S GG R+ I F+DD
Sbjct:  291 WYIDSGCSNH-MTGTKEWFFDFDDKFRESVKLGNDSKMTVMGRGNVK---LNMDGKIHVI-TNVYYLPGLSNNLLSVGQLQQRGLTTVFKNNMCQLFHEEKGLILTTKMTFNKMYIVKASMILPNCLQATALEETTLWHQRYAHLSFQGLKTLITKQMVKGLPNLKESGDKCTDCLVGKQHRSSIPKEANWRASKKLELVHSDICGPINPQSNGGNRYFITFIDD 510          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN)

HSP 1 Score: 94.4 bits (233), Expect = 1.230e-18
Identity = 72/226 (31.86%), Postives = 113/226 (50.00%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLY--YNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLL-HERLGHIR-DLLTVARQQSI-----RLSGKLGVCSACEKGKASKQPIKKYREERTAKPLELVHTDIVGPV-DKSFGGCRFAIIFVDD 219
            W +DSGC+ H +T  RDLF    + ++  + T   + LDV G G+V   I   +G  R I  NVFYV     + LSV +++++G    F   R  +    N +    + TS K +   +   D N        DT +L H+R GH+  D L     + +     ++  +  +C  C  GK +K+   +    + +KPL+LVH+DI GP+  +S GGCR+ I F+DD
Sbjct: 1054 WYLDSGCSNH-MTGNRDLFINLDESLKKEVRTGDDKRLDVIGSGEVSVSI---KGRTRKI-PNVFYVKGLKHNLLSVGQLINKGYAILFQKDRCIIKDAENEVIGKIRMTSNKMFPLHLD-SDINLAMTMTTKDTTILWHKRYGHVNVDTLISMENKGLVFGLPKIMKRESLCEGCISGKQTKKTFPRKAIWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDD 1273          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: A0A8J5YJF7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YJF7_9ROSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.810e-18
Identity = 66/224 (29.46%), Postives = 112/224 (50.00%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYY-NGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHI--RDLLTVARQQSIRLSGKL----GVCSACEKGKASKQPIKKYREERTAKPLELVHTDIVGPV-DKSFGGCRFAIIFVDD 219
            W++DSGCT H ++P   +F+   +  ++ +     + +  EG+GDV+  I TA G    I  +V  VPE   + LS+ +++ +G    F  Q  ++   NG  +     S K +       D ++       DTKL H+RLGH+  + +  +  ++ ++   K      VC  C+ GK ++ P       R +  LELVHTD+ GP+  +S  G R+ I+F+DD
Sbjct:  327 WLLDSGCTNH-MSPDETIFKTLDRSYKTRVKIGNGQLIKAEGKGDVQ--ICTATGGK--IIKDVLLVPEIDRNLLSITQLLEKGYSVVFKGQECQITDPNGSRLMTVTMSDKCFEVNW-SSDSHSTHVALTDDTKLWHQRLGHVNFKSMTWMVSKEMVKNFTKTVHIEDVCEVCQMGKQARLPFPANTTWRASSKLELVHTDVCGPMRTESLSGNRYFILFIDD 544          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: R7QCG5_CHOCR (gag_pre-integrs domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCG5_CHOCR)

HSP 1 Score: 92.0 bits (227), Expect = 5.720e-18
Identity = 68/223 (30.49%), Postives = 111/223 (49.78%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYYNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHIRDLLTVARQQSIRLSGKLG-----VCSACEKGKASKQPIKKYREERTAKP-LELVHTDIVGPVD-KSFGGCRFAIIFVDD 219
            W++DSGC+ H +T  R LF  + ++    +    K   +V GRG+VE ++            NV +VP+   S LSV ++VS+G++  F  + + +   G T+     +  +     I+   N      VV  + LHER+ H+      +   +  +SG        +C AC  GKA++  I K R    A+  L+LVH+D+ GP++ +S GG R+ I FVDD
Sbjct:  295 WLVDSGCSAH-ITFDRSLFVTYEEMQSGSVEMGTKARANVAGRGEVEFMLNVNGSPHPCKLSNVLHVPDFGYSLLSVSQIVSKGLQVSF-EKDKCIVTAGPTVV---ATASQVGDLFILDVMNETFSAHVVTLQTLHERMAHVNVQGIASMIHNNVVSGINSDNHSLLCPACVFGKATRSVIPKQRSSSRAQNCLDLVHSDVCGPLEVQSIGGSRYFITFVDD 512          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: A0A8J6DCH3_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DCH3_9ROSI)

HSP 1 Score: 92.0 bits (227), Expect = 7.060e-18
Identity = 64/224 (28.57%), Postives = 111/224 (49.55%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLY-YNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGH--IRDLLTVARQQSIRLSGKL----GVCSACEKGKASKQPIKKYREERTAKPLELVHTDIVGPV-DKSFGGCRFAIIFVDD 219
            W++DSGCT H ++P   +F+   +  ++ +     + +  EG+GDV  LI T  G    +  NV  VPE   + LS+ +++ +G    F  Q+ ++   NG ++     S K +      GD ++        TKL H+RLGH   + +  +  ++ +    K      +C  C+ GK ++ P       R +  LELVH+D+ GP+  +S  G R+ I+F+DD
Sbjct:  282 WLLDSGCTNH-MSPDATIFKTLDRSCKTKVKVGNGQFIKAEGKGDV--LICTPTG--NKVIPNVLLVPEIDRNLLSISQLLEKGYSVVFKGQKCQITDLNGSSLMTVTMSDKCFEVNW-SGDSHSAHVASTEGTKLWHQRLGHAKFKSMAQMVNKEMVENFIKTVQIEDLCEVCQMGKQARLPFPANTTWRASSKLELVHSDVWGPMRTESLNGNRYFILFIDD 499          
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Match: A0A8J6D2N4_9ROSI (Integrase catalytic domain-containing protein n=2 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D2N4_9ROSI)

HSP 1 Score: 91.7 bits (226), Expect = 9.380e-18
Identity = 65/224 (29.02%), Postives = 109/224 (48.66%), Query Frame = 0
Query:    4 WIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVEGLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLYY-NGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGH--IRDLLTVARQQSIRLSGKL----GVCSACEKGKASKQPIKKYREERTAKPLELVHTDIVGPV-DKSFGGCRFAIIFVDD 219
            W++DSGCT H ++P   +F+   +  ++ +     + +  EG+GDV+  I TA G    I  +V  VPE   + LS+ +++ +G    F  Q  ++   NG  +     S K +       D ++       DTKL H+RLGH   + +  +  ++ +    K      VC  C+ GK ++ P       R    LELVH+D+ GP+  +S  G R+ I+F+DD
Sbjct:  330 WLLDSGCTNH-MSPDETIFKTLDRSCKTRVKIGNGQLIKAEGKGDVQ--ICTATGGK--IIKDVLLVPEIDRNLLSISQLLEKGYSVVFKGQECQITNPNGSCLMTVTMSDKCFEVNW-SSDSHSTHVASTDDTKLWHQRLGHANFKSMAQMVSKEMVENFTKTVQSEDVCEVCQMGKQARLPFPTNTTWRATSKLELVHSDVCGPMRTESLSGNRYFILFIDD 547          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48754.12011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QK84_CHOCR1.890e-2030.80Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6LQL6_9ASTR9.560e-2030.60Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
R7QC71_CHOCR3.960e-1931.84Integrase catalytic domain-containing protein n=4 ... [more]
R7QJV2_CHOCR5.920e-1930.80Integrase catalytic domain-containing protein n=3 ... [more]
A0A2K3N9S3_TRIPR8.180e-1930.67Copia-type polyprotein n=2 Tax=Trifolium TaxID=389... [more]
A0A251SKN6_HELAN1.230e-1831.86Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A8J5YJF7_9ROSI1.810e-1829.46Integrase catalytic domain-containing protein n=1 ... [more]
R7QCG5_CHOCR5.720e-1830.49gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A8J6DCH3_9ROSI7.060e-1828.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6D2N4_9ROSI9.380e-1829.02Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48754contigH-paniculata_contig48754:649..1389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48754.12011.1mRNA_H-paniculata_contig48754.12011.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48754 649..1389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48754.12011.1 ID=prot_H-paniculata_contig48754.12011.1|Name=mRNA_H-paniculata_contig48754.12011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
HVHWIIDSGCTGHHLTPQRDLFQIFRQVVRSPIATAGKEELDVEGRGDVE
GLIWTAEGAMRIIFCNVFYVPEASDSTLSVERMVSQGMEAYFGSQRRRLY
YNGITIPFQHTSRKEYSFRMIMGDENNEKRQQVVDTKLLHERLGHIRDLL
TVARQQSIRLSGKLGVCSACEKGKASKQPIKKYREERTAKPLELVHTDIV
GPVDKSFGGCRFAIIFVDD
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