mRNA_H-paniculata_contig48737.12007.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig48737.12007.1
Unique NamemRNA_H-paniculata_contig48737.12007.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: A0A6H5JE99_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE99_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.520e-23
Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGF 171
            AH+HFIGIDPAHRGAGLG LLY  FF AV+  GCT+VHAVT P+NTASVAFH+ +GF
Sbjct:  110 AHAHFIGIDPAHRGAGLGALLYDQFFKAVQTHGCTLVHAVTSPANTASVAFHKAIGF 166          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: A0A3G8GIV7_9BURK (GNAT family N-acetyltransferase n=4 Tax=Alcaligenaceae TaxID=506 RepID=A0A3G8GIV7_9BURK)

HSP 1 Score: 87.0 bits (214), Expect = 3.600e-20
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGF 171
            A+ HF+G+DPA R AGLGR+LY+ FFD VRARGC  VH++T P+NT S+AFH ++GF
Sbjct:   71 AYIHFVGVDPALRAAGLGRVLYERFFDTVRARGCREVHSITSPANTGSIAFHRRMGF 127          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: A0A208Y806_9BURK (GNAT family N-acetyltransferase n=1 Tax=Pigmentiphaga sp. NML080357 TaxID=2008675 RepID=A0A208Y806_9BURK)

HSP 1 Score: 84.7 bits (208), Expect = 2.620e-19
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGF 171
            A+ HF+G+DPA RG GLGR+LY+ FFD VRA GC   H++T P+N+ S+AFH K+GF
Sbjct:   69 AYIHFVGVDPARRGGGLGRMLYEHFFDVVRALGCEEAHSITSPANSGSIAFHRKMGF 125          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: UPI001FB004F1 (GNAT family N-acetyltransferase n=1 Tax=Fundidesulfovibrio sp. SG127 TaxID=2922866 RepID=UPI001FB004F1)

HSP 1 Score: 76.6 bits (187), Expect = 1.740e-16
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGFL 174
            A+ HF+GI P HR  G+G+ LYK FFD V+  GC  VH VT P NT S+A+H K+GF+
Sbjct:   39 AYIHFVGIHPDHRKGGMGKGLYKKFFDTVKNHGCKTVHLVTSPDNTNSIAYHAKMGFM 96          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: UPI001C5EEBDF (GNAT family N-acetyltransferase n=1 Tax=Nonomuraea ceibae TaxID=1935170 RepID=UPI001C5EEBDF)

HSP 1 Score: 76.3 bits (186), Expect = 4.280e-16
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGF 171
            A+ HF+G+ P  R AGLGR LY  FFD  R  GC +V A+T P NTAS+AFH ++GF
Sbjct:   71 AYIHFVGVSPRERAAGLGRRLYGRFFDLAREHGCHVVRAITSPVNTASIAFHRRLGF 127          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: A0A7W0TVK6_9CHLR (GNAT family N-acetyltransferase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TVK6_9CHLR)

HSP 1 Score: 76.6 bits (187), Expect = 4.430e-16
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 1
Query:   10 HFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGF 171
            HF+G+DPA RGAG+G+ LY  F DA R  GC  VHAVT P+N AS+AFH ++GF
Sbjct:   75 HFVGVDPAVRGAGIGQALYVRFGDAARTLGCREVHAVTAPTNAASIAFHRRLGF 128          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: A0A0K2B5D8_STRA7 (Putative acetyltransferase n=4 Tax=Streptomyces ambofaciens TaxID=1889 RepID=A0A0K2B5D8_STRA7)

HSP 1 Score: 78.6 bits (192), Expect = 4.710e-16
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGFLPRPVE 189
            A+ HF+G+DPA  G G+GR LY+ FF  VRA G   VH +T P NTAS AFH ++GF+  P +
Sbjct:   63 AYVHFVGVDPAQHGQGVGRALYRAFFALVRAHGRRYVHCITSPENTASQAFHARLGFIAAPTQ 125          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: UPI001FEAF70D (GNAT family N-acetyltransferase n=1 Tax=Streptomyces abyssomicinicus TaxID=574929 RepID=UPI001FEAF70D)

HSP 1 Score: 77.8 bits (190), Expect = 1.170e-15
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGFLPRP 183
            A+ HF+G+DPA  G GLGR LY+ FF  VRA G   VH +T P NTAS AFH ++GF+  P
Sbjct:   84 AYVHFVGVDPALHGQGLGRALYRAFFALVRAHGRRYVHCITSPENTASQAFHTRLGFMAAP 144          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: Q1RQL4_STRA7 (Putative acetyltransferase n=1 Tax=Streptomyces ambofaciens (strain ATCC 23877 / 3486 / DSM 40053 / JCM 4204 / NBRC 12836 / NRRL B-2516) TaxID=278992 RepID=Q1RQL4_STRA7)

HSP 1 Score: 78.6 bits (192), Expect = 1.450e-15
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGFLPRPVE 189
            A+ HF+G+DPA  G G+GR LY+ FF  VRA G   VH +T P NTAS AFH ++GF+  P +
Sbjct:  226 AYVHFVGVDPAQHGQGVGRALYRAFFALVRAHGRRYVHCITSPENTASQAFHARLGFIAAPTQ 288          
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Match: UPI0017FA7EA4 (GNAT family N-acetyltransferase n=1 Tax=Hamadaea sp. TaxID=2024425 RepID=UPI0017FA7EA4)

HSP 1 Score: 74.7 bits (182), Expect = 1.790e-15
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1
Query:    1 AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVAFHEKVGFLPR-PVE 189
            A+ HF+G+ PA RG GLGR+LY+ FFD  RA G T + A+T P N  S+AFH+++GF  R PVE
Sbjct:   71 AYIHFVGVAPAARGTGLGRVLYERFFDLARADGRTRIGAITSPVNAGSIAFHQRMGFAVRGPVE 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48737.12007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE99_9PHAE1.520e-2375.44N-acetyltransferase domain-containing protein n=2 ... [more]
A0A3G8GIV7_9BURK3.600e-2063.16GNAT family N-acetyltransferase n=4 Tax=Alcaligena... [more]
A0A208Y806_9BURK2.620e-1959.65GNAT family N-acetyltransferase n=1 Tax=Pigmentiph... [more]
UPI001FB004F11.740e-1655.17GNAT family N-acetyltransferase n=1 Tax=Fundidesul... [more]
UPI001C5EEBDF4.280e-1656.14GNAT family N-acetyltransferase n=1 Tax=Nonomuraea... [more]
A0A7W0TVK6_9CHLR4.430e-1661.11GNAT family N-acetyltransferase n=1 Tax=Chloroflex... [more]
A0A0K2B5D8_STRA74.710e-1652.38Putative acetyltransferase n=4 Tax=Streptomyces am... [more]
UPI001FEAF70D1.170e-1555.74GNAT family N-acetyltransferase n=1 Tax=Streptomyc... [more]
Q1RQL4_STRA71.450e-1552.38Putative acetyltransferase n=1 Tax=Streptomyces am... [more]
UPI0017FA7EA41.790e-1554.69GNAT family N-acetyltransferase n=1 Tax=Hamadaea s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48737contigH-paniculata_contig48737:871..1059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score74.7
Seed ortholog evalue1.7e-11
Seed eggNOG ortholog211114.JOEF01000009_gene1711
Preferred nameyqjY
KEGG koko:K06977
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564
EggNOG free text desc.Acetyltransferase (GNAT) family
EggNOG OGs2IKW6@201174,4E63N@85010,COG0454@1,COG0456@2
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-28_000410.1
COG Functional cat.K
Best tax levelPseudonocardiales
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size189
Cds size189
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930441.2002182-CDS-H-paniculata_contig48737:870..10591622930441.2002182-CDS-H-paniculata_contig48737:870..1059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48737 871..1059 +
1691481293.712172-CDS-H-paniculata_contig48737:870..10591691481293.712172-CDS-H-paniculata_contig48737:870..1059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48737 871..1059 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48737.12007.1prot_H-paniculata_contig48737.12007.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig48737 871..1059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig48737.12007.1

>prot_H-paniculata_contig48737.12007.1 ID=prot_H-paniculata_contig48737.12007.1|Name=mRNA_H-paniculata_contig48737.12007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp
AHSHFIGIDPAHRGAGLGRLLYKCFFDAVRARGCTIVHAVTHPSNTASVA
FHEKVGFLPRPVE
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mRNA from alignment at H-paniculata_contig48737:871..1059+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig48737.12007.1 ID=mRNA_H-paniculata_contig48737.12007.1|Name=mRNA_H-paniculata_contig48737.12007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at H-paniculata_contig48737:871..1059+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCACACTCGCACTTCATAGGGATAGACCCTGCACACAGGGGGGCGGGATT GGGAAGACTGCTCTACAAGTGCTTTTTCGATGCCGTCAGAGCTCGCGGGT GCACGATCGTCCACGCAGTTACGCACCCCAGCAACACAGCGTCGGTGGCC TTCCATGAAAAGGTTGGCTTCCTACCTCGCCCCGTCGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig48737:871..1059+

>mRNA_H-paniculata_contig48737.12007.1 ID=mRNA_H-paniculata_contig48737.12007.1|Name=mRNA_H-paniculata_contig48737.12007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig48737:871..1059+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCACACTCGCACTTCATAGGGATAGACCCTGCACACAGGGGGGCGGGATT
GGGAAGACTGCTCTACAAGTGCTTTTTCGATGCCGTCAGAGCTCGCGGGT
GCACGATCGTCCACGCAGTTACGCACCCCAGCAACACAGCGTCGGTGGCC
TTCCATGAAAAGGTTGGCTTCCTACCTCGCCCCGTCGAGGCACACTCGCA
CTTCATAGGGATAGACCCTGCACACAGGGGGGCGGGATTGGGAAGACTGC
TCTACAAGTGCTTTTTCGATGCCGTCAGAGCTCGCGGGTGCACGATCGTC
CACGCAGTTACGCACCCCAGCAACACAGCGTCGGTGGCCTTCCATGAAAA
GGTTGGCTTCCTACCTCGCCCCGTCGAG
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