mRNA_H-paniculata_contig4871.12004.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 233 bits (594), Expect = 6.370e-66 Identity = 118/251 (47.01%), Postives = 160/251 (63.75%), Query Frame = 3
Query: 276 SDWTYGE-GADGHSLMDPAHWGEIYGDCYGEHQSPINLADSHIKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVTGQETNPLEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVA--DHHLVDLSGNTNRPIQALHERTVFYVN 1019
++WTY +G P+ W + Y DC + QSPI+LA + Y+LKFYP+ C S E+ F E W + GC + + F + Y L+ +H+HS SEH +GGS H AE+H VHVK+GT+D+LLVVG+L D TD+G N+E+ LWDVL G ET E F Y+++P++P +SHY GSLTTPPCTEGVKWIVM+ +S QL FR +VA D VD GNTNRP Q+L++R +F+V+
Sbjct: 40 AEWTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIG-ETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFVH 289
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 211 bits (536), Expect = 8.210e-58 Identity = 120/295 (40.68%), Postives = 174/295 (58.98%), Query Frame = 3
Query: 162 MVSATVATSALLILGVSCGLLGFLMTEEH----RRL--NTEEPHSDWTY-GEGADGHSLMDPAHWGEIYGDCYGEHQSPINLADSHIKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVTGQETNPLEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVADHHLVDLS--GNTNRPIQALHERTVFYVN 1019
M S TS+LL+L ++ G + E+ R L +E ++WTY G G P W Y DC G Q+PIN+A + E + F+P C+S+E+ F W V+ +GC + L + +TY L+ H+HS SEH +GG+ H AE+H+VH+KQ T D LLVVGI+ + +D+G+N+EL +W+V+ Q+ E+F + Y +LPA+PS++ Y GSLTTPPCTEGV+WI+M+ +S QL +R+AVA H +S G TNRPIQ L+ R V YV+
Sbjct: 1 MPSFAQVTSSLLVLALAAQASGRKIQEKGGLRLRNLAETDDEAAAEWTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAE-EQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYVS 294
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 209 bits (532), Expect = 2.910e-57 Identity = 109/257 (42.41%), Postives = 159/257 (61.87%), Query Frame = 3
Query: 264 EEPHSDWTYGEGA-DGHSLMDPAHWGEIYGDCYGEHQSPINLADSHIKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQ---GTDDELLVVGILMDATDFGENIELHMLWDVLVTGQETNPLEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVAD--HHLVDLSGNTNRPIQALHERTVFYV 1016
E DWTY + +G P+ W Y DC G+ QSPINL+ + ++A E++L+ + C+S E+ F H W ++ + C S LSFD Y L+ +H+HS SEH + GS HDAE+H+VH + GT+ ELLV+G+ +DA + G N+ L LWDVL +G + + ++PYE++P+ +YSHY GSLTTPPC+E V+W+VM+ T+I QL +FR +VA + VD NTNRP QA++ R V+ V
Sbjct: 43 ESSFPDWTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSGAKPRGV----INPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 154 bits (390), Expect = 5.360e-40 Identity = 78/143 (54.55%), Postives = 102/143 (71.33%), Query Frame = 3
Query: 597 MGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVTGQETNPLEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVA--DHHLVDLSGNTNRPIQALHERTVFYVN 1019
+GGS H+AE+H VHVK GTDD+LLV+G+L D T +G N+E+ LWDVL G+ T E F Y+++P++P +SHY GSLTTPPCTEGVKWIVM+ + QL FR +VA D+ VD GNTNRP Q+L+ R +F+VN
Sbjct: 2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTD-EVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFVN 143
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: A0A521S0F5_9BACT (Carbonic anhydrase family protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A521S0F5_9BACT) HSP 1 Score: 129 bits (323), Expect = 2.610e-29 Identity = 91/252 (36.11%), Postives = 131/252 (51.98%), Query Frame = 3
Query: 270 PHSDWTYGEGADGHSLMDPAHWGEI---YGDCY-GEHQSPINLADSHIKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVT--GQETNPLEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVADHHLVDLSGNTNRPIQALHERTV 1007
PH W Y G +G P HWGEI + C G++QSPI++ +++ ++D K P + H VN+ + S ++ YEL+ H HS SEH M G D EVH+VH + + EL VVG+ M+A EN + +WD L T G+E + + + L+P + LPA +YS+Y GSLTTPPC+EGV W+VM + +S Q+ F + T RP+Q LHERT+
Sbjct: 59 PH--WEYA-GKEG-----PEHWGEIAPEFQTCKTGKNQSPIDITSGKPEKLSPIQFDYKAAP-------IGIVNNGHTIQVNVP---KGSSITVGGKKYELLQFHFHSPSEHKMSGKSGDMEVHLVH--KSAEGELAVVGVFMNAGK--ENAVIKAVWDNLPTEVGKEKS-VAQVTLNPADFLPAKKTYSNYPGSLTTPPCSEGVNWMVMKSSIEVSKAQVEKF---------TSIFPMTARPVQPLHERTI 278
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 127 bits (320), Expect = 3.800e-29 Identity = 90/258 (34.88%), Postives = 126/258 (48.84%), Query Frame = 3
Query: 333 WGEIYGDCYGEHQSPINLADSHIKRIDADEYDLK--FYPDM--CSSSEMSFSPGEHQWMVNMAG-CKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDAT-DFGENIELHMLWDVL--VTGQET----------------------NPLEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVADHH--LVDLSGNTNRPIQALHERTVF 1010
WG +Y DC G QSPIN+A I D + F DM C ++ + W V G C+ ++ + + L+ HLHSVSEH +GG +DAE+H VH L VVG+++ +T D N+E W+ + V+G++ + +E+ N PY MLPA +Y +Y GSLTTPPC+E V WIVM +S +QL FR + D LVD GN RP Q + R V+
Sbjct: 2 WGALYPDCLGVRQSPINIA-RDIVTTDCTLAPVTGAFVFDMGACMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVN--PYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: A0A7S3XQ34_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ34_HETAK) HSP 1 Score: 127 bits (319), Expect = 8.430e-29 Identity = 75/200 (37.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query: 297 GADGHSLMDPAHWGEIYGDCYGEHQSPINLADSHIKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVTGQ----ETNPLEEFNLSPY-EMLPASPSYSHYEGSLTTPPCTEGVKWIVM 881
GAD P +W + DC G QSPIN+ + +D L+ S + + H W V+M C + ++ Y LI H HS SE+++GG DAE+H+VH + ELLV+G++ D D+G N W+ + LE NL PY E+LPA+PSY H+ GSLTTPPC+EGV WI+M
Sbjct: 86 GADEDYACSPENWDSVNDDCAGTSQSPINVVQASPS---SDLSGLQLTKAKSSCNAVYLIDNYHTWKVDMTSCDDAYYATWKGTDYYLIQFHFHSPSENTIGGGYFDAEMHLVHAS--AEGELLVIGVMFDVVDYGGNHFFSQFWNNTWSDDPDWYRVVSLES-NLDPYTEILPATPSYYHWNGSLTTPPCSEGVTWILM 279
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: H6WB76_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB76_VAULI) HSP 1 Score: 128 bits (322), Expect = 1.320e-28 Identity = 95/283 (33.57%), Postives = 132/283 (46.64%), Query Frame = 3
Query: 279 DWTYGEGA--DGHSLMDPAHWGEIYGDCYGEHQSPINLADSHIKRIDADEYDLK----FYPDMCSSSEMSFSPGEHQWMVNMAG-CKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDAT-DFGENIEL-----HMLW---------DVLVTGQETNP---------------LEEFNLSPYEMLPASPSYSHYEGSLTTPPCTEGVKWIVMTGTTLISFEQLTVFRKAVADHH--LVDLSGNTNRPIQALHERTVF 1010
DW+Y + H + P WG +Y DC G QSPIN+A I D + F MC ++ + W V G C+ ++ + + L+ HLHSVSEH +GG +DAE+H VH L VVG+++ +T D N+E HM + +++ T P +E+ N PY MLPA +Y +Y GSLTTPPC+E V WIVM +S +QL FR + D LVD GN RP Q + R V+
Sbjct: 58 DWSYNYECNYEEHGQVAPDMWGYLYPDCLGVRQSPINIA-RDIVTTDCTLAPVTGAFVFDMGMCMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNIGNLEFTKYAEHMAYVSGKQKYASEIMETDATMAPAATPSSMASSTSMSAMEQVN--PYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 337
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK) HSP 1 Score: 126 bits (316), Expect = 1.430e-28 Identity = 73/190 (38.42%), Postives = 102/190 (53.68%), Query Frame = 3
Query: 324 PAHWGEIYGDCYGEHQSPINLADSHIKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVTGQETNPLE---EFNLSPY-EMLPASPSYSHYEGSLTTPPCTEGVKWIVM 881
P +WGE+ DC GE+QSPIN+ + K + L + C + H W V+M+ C +++ YEL+ H HS SE+++GG DAE+H+VH D LLV+G++ D D+G N W+ + T E L PY E+LPA SY H+ GSLTTPPC+EGV WI+M
Sbjct: 79 PENWGEVNRDCEGENQSPINVVMAQ-KSKSLSQLQLNKNNEDCDL--LYLVDNYHTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHAD--ADSNLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILM 263
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK) HSP 1 Score: 122 bits (307), Expect = 1.170e-27 Identity = 74/209 (35.41%), Postives = 105/209 (50.24%), Query Frame = 3
Query: 291 GEGADGHSLMDPAHWGEIYGDCYGEHQSPINLADSH--------IKRIDADEYDLKFYPDMCSSSEMSFSPGEHQWMVNMAGCKERSKLSFDDDTYELINVHLHSVSEHSMGGSCHDAEVHMVHVKQGTDDELLVVGILMDATDFGENIELHMLWDVLVTGQETNPLE---EFNLSPY-EMLPASPSYSHYEGSLTTPPCTEGVKWIVM 881
G+ + G P +W DC GE QSPIN+ + + + ++ DL + D H W V+M+ C +++D YEL+ H HS SE+++GG DAE+H+VH D LLV+G++ D D+G N W+ + T E L PY E+LPA SY H+ GSLTTPPC+EGV WI+M
Sbjct: 42 GDYSGGEEACSPENWYAYAEDCAGESQSPINVVQASPSTTLSQLVLNKNNEDCDLLYLVD-----------NYHTWKVDMSECDGSYTTTWNDVDYELVQFHFHSPSENTIGGGYFDAEMHLVHAD--ADSNLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSSTLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILM 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4871.12004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4871.12004.1 >prot_H-paniculata_contig4871.12004.1 ID=prot_H-paniculata_contig4871.12004.1|Name=mRNA_H-paniculata_contig4871.12004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bp MVSATVATSALLILGVSCGLLGFLMTEEHRRLNTEEPHSDWTYGEGADGHback to top mRNA from alignment at H-paniculata_contig4871:6239..13916+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4871.12004.1 ID=mRNA_H-paniculata_contig4871.12004.1|Name=mRNA_H-paniculata_contig4871.12004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7678bp|location=Sequence derived from alignment at H-paniculata_contig4871:6239..13916+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4871:6239..13916+ >mRNA_H-paniculata_contig4871.12004.1 ID=mRNA_H-paniculata_contig4871.12004.1|Name=mRNA_H-paniculata_contig4871.12004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1722bp|location=Sequence derived from alignment at H-paniculata_contig4871:6239..13916+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |