mRNA_H-paniculata_contig48678.11998.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig48678.11998.1
Unique NamemRNA_H-paniculata_contig48678.11998.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 6.350e-77
Identity = 157/332 (47.29%), Postives = 211/332 (63.55%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTFGEEVERVIH--------LAGSFGGDPKPVNPIQSMEDARAVLDGLG----TIASLCKLGPASPPKLADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 957
            VL    V  L PVC  F AL +A +GA +++D L  L+    ++   + Q       L  V+  +  F     R++         LA    G       ++ + +  A++DGL      +A    L P + P +A VP GA++L  ++V+RP +LE AI+++TN A  +APCVL GM GGGK+VLASAVVRD +VR+HF AGIFW RVG+ +K+ LH  L GLVL +A+     PP L S+E+VT +L A  A +   RLVVLDDVWE EVV+ALQ T LQLLVTTRDR+VVS+PGE +EVG+MEE+EALEVLRVGCGA + +ELPR++ALQ
Sbjct:  279 VLDIASVGPLVPVCQAFKALIEAAEGAAESQDKLQRLVPRCTMLTTVLIQHHRAVGPLAQVQKPMKDFIVTTNRLLFCHRTDLSTLADFEEG-------LRGITNDIALVDGLEHHQLLLAMHGHLRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 3.190e-73
Identity = 154/340 (45.29%), Postives = 210/340 (61.76%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTFGEEVERVIHLAGSF--GGDPKPV--------------NPIQSMEDARAVLDGLG----TIASLCKLGPASPPKLADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQ 957
            VL    V  L+PVC  F  L +A +GA +++D L GLI     +   + Q       L  V+  +  F      +   A ++  GG  + +                ++++ +  A++DGL      +A   +L P + P +A VP G ++L   +++RP LL  AI ++TN A+ +APCVL GM G GK+VLASAVVRD +VR+HF AG+FW+R  ++AK+ LH  L G  L +A+      P L S+E+VTR+L AV A S   RLVVLDDVWE E+VDAL+ TGLQLLVTTRDR+VVS+PGE VEVG+MEE+EALEVLRVGCGA + +ELPR EALQ
Sbjct:   73 VLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQ 411          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 3.200e-72
Identity = 153/335 (45.67%), Postives = 208/335 (62.09%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDY-----GVLI-----VKSIPQTSTTRTILPAVKYALTTFGEEVERVIHLAGSFGGDPKPVNPIQSMEDARAVLDGLG----TIASLCKLGPASPPKLADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQV 960
            VL  T V  L+PVC  F  L +A +GA +++D L GLI        VLI     V  + Q    R +    +  L+T  +  ER                 ++++ +  A++DGL      +A   +L P + P +A VP G ++L   +++RP LL  AI ++TN A+ +APCVL GM G GK+VLASAVV+  +VR+HF AG++W+R  ++AK+ LH  L GL L +A+      P L S+E+VTR+L AV A S   RL+VLDDVWE EVVD L+ TGLQLLVTTRDR+VVS+PGE VEVG+ME+ EALE+LRVGCGA + +ELPR E LQV
Sbjct:   78 VLDMTSVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCPFLTTVLIQHDRAVGPLAQGGKCRALF-CHRSDLSTLTDFEER-----------------LRTISNDIALVDGLEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDMED-EALELLRVGCGASKNLELPRAEVLQV 392          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.680e-50
Identity = 134/340 (39.41%), Postives = 178/340 (52.35%), Query Frame = 1
Query:    4 LSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTF----GEEVERVIHLAG-----SFGGDPKPVNPIQSMED----------ARAVLDGLGTIASLCKLGPASP-PKLADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGAFRTVELPRVEALQV 960
            L    V  L PVC  F AL +A +GA +  ++L  L+ +   +V  + +       L AV   L  F    GE  +R   +AG     +F    K    + S +D            AVLD    +  + +     P P +ADVP  A+ L  S+V R  L    +  +T    + AP VL GMGG GK++LAS+VVR   VRKHFRAG FWLRVG   ++ L  L  GL   LA  + + P +  SLE++ +HLT + A+  L RLVVLDDVWE  VVD L+ TGL+LLVTTR  +VV+V G    VGNM   EA E+L+   GA   + LP  EA QV
Sbjct:   75 LDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATDASGAPYVLLGMGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLQALFEGLA-RLAIPEAKLPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVAVRGGRTVVGNMATGEARELLKSKSGA---ITLPETEADQV 410          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 3.900e-50
Identity = 132/332 (39.76%), Postives = 175/332 (52.71%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTFGEEVERVIHLAGSFGGDPK---------PVNPIQSMEDAR-------AVLDGL----GTIASLCKLGPASPPKLADVPVGAVTLG-KSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFPPQ----LESLEDVTRHLTAVGAKSPL-RLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGA 918
            VL    V  L PVC  F AL +A +GA +++  L  L+     +   + Q       L  V   +  F      +   A  +    K          ++ +   E+         A++DGL      +A+L  L P S P +A VP GA+ L   SYV R  + E A + +T+P    AP  + GMGGGGK+VLASAVVR   VR+HFR GIFW+RVG+ AK  L  LL+GL  E+ A   + P      L+ LE V +HL AV +     RLVVLDDVWE EVVDA    G ++L+TTRDR+VV VP   +EVG+M E EALE+LR   GA
Sbjct:   64 VLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVA-DGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGA 394          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 3.750e-49
Identity = 132/332 (39.76%), Postives = 180/332 (54.22%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTFGEEVERVIHLAGSFGGDPK---------PVNPIQSMEDAR-------AVLDGL----GTIASLCKLGPASPPKLADVPVGAVTL-GKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFP---PQ-LESLEDVTRHLTAVGAK-SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCGA 918
            VL    V  L PVC  F AL +A +GA + +D L  L+     +   + Q       L  V+  +  F      +   A  +    K          ++ +   E+         A++DGL      +A+L  L P S P +A VP GA+ L   SYV R  + E A + +T P  + AP  + GMGGGGK+VLASAVVR   VR+HFR GIFW+RVG+ AK  L  LL+GL  ++ A   + P   P+ L+SLE V +HL AV +  +  RLVVLDDVWE EVVDA    G ++L+TTRDR+VV VP   +E+G++ E EALE+LR   GA
Sbjct:  101 VLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVA-DGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGA 431          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 5.700e-48
Identity = 130/332 (39.16%), Postives = 176/332 (53.01%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTFGEEVERVIHLAGSFGGDPK---------PVNPIQSMEDAR-------AVLDGL----GTIASLCKLGPASPPKLADVPVGAVTL-GKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKE----FPPQLESLEDVTRHLTAVGAK--SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCG 915
            VL    V  L PVC  F AL +A +GA + +D L  L+     +   + Q       L  V+  +  F      +   A  +    K          ++ +   E+         A++DGL      +A+L  L P S P +A VP GA+ L   SYV R  + E A + +T P  + AP  + GMGGGGK+VLASA VR   VR+HFR GIFW+RVG+ AK  L  LL+GL  ++ A   +     P  L+ LE V +HL AV +   SP RLVVLDDVWE EVVDA    G ++L+TTRDR+VV +P   +E+G+M E EALE+LR   G
Sbjct:  118 VLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVA-DGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSP-RLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSG 447          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 5.320e-46
Identity = 99/184 (53.80%), Postives = 127/184 (69.02%), Query Frame = 1
Query:  364 LADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKE----FPPQLESLEDVTRHL-TAVGAKSPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVL 900
            +A VP GA+TL +SYV R  + E A + +  P    AP  + GMGGGGKT+L SAVVR + VR+HFR G+FW+RVG++AK  L +LL+GL  E++A   +     P  LESLE V +HL T   A +  RLVVLDDVWE EVVDAL   GL++LVTTRDR+VV V G  +E+G+M E EALE+L
Sbjct:    1 MAAVPAGALTLPQSYVERAAVQEVA-DGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELL 183          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 8.460e-46
Identity = 129/332 (38.86%), Postives = 173/332 (52.11%), Query Frame = 1
Query:    1 VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQTSTTRTILPAVKYALTTFGEEVERVIHLAGSFGGDPK---------PVNPIQSMEDAR-------AVLDGLGT----IASLCKLGPASPPKLADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKEFP---PQ-LESLEDVTRHLTAVGAK---SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVLRVGCG 915
            VL    V  L PVC    AL +A +GA +  D +  L+     +   + Q       L  V   +  F      +   A  +  D K          ++ +   E+         A++DGL      +A+L  L P     +A VP GA+ L + YV R  + E A + +T P    AP  + G+GGGGK+VLASAVVR   VR+HFR GI W+RVG+ AK  L  LL+GL  E+     + P   PQ L+SLE V +HL AV A    SP RLVVLDDVWE EVVDAL   G ++L+TTRD +VV VP   +++G+M E EALE+LR   G
Sbjct:   76 VLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQEVA-DGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSP-RLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSG 405          
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 3.430e-45
Identity = 106/210 (50.48%), Postives = 131/210 (62.38%), Query Frame = 1
Query:  289 DARAVLDGLGTIASLCKLGPASPPKLADVPVGAVTLGKSYVTRPFLLESAINHITNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNAKEDLHTLLRGLVLELAARDKE----FPPQLESLEDVTRHLTAVGAK--SPLRLVVLDDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVL 900
            D R VLD +    +   + P S P +A VP  AV L  S       +    + ITNP    AP  + GMGGGGK+VLASAVVR + VR+HFR GIFWL VG+ AK+ L  LL+GL  ++ A   +     P  L+SLE V RHL AV +   SP RLVVLDDVWE EVVDAL   G ++LVTTRDR+VV VP   +E+G+M E EALE+L
Sbjct:  111 DVRRVLDAISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSP-RLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELL 319          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48678.11998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF10_9PHAE6.350e-7747.29NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G6W2_ECTSI3.190e-7345.29NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMV3_9PHAE3.200e-7245.67NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KK53_9PHAE1.680e-5039.41NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KXS7_9PHAE3.900e-5039.76NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G720_ECTSI3.750e-4939.76NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G722_ECTSI5.700e-4839.16NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5LJA6_9PHAE5.320e-4653.80NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGG5_ECTSI8.460e-4638.86NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE3.430e-4550.48NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48678contigH-paniculata_contig48678:19..1098 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.8
Seed ortholog evalue3.2e-66
Seed eggNOG ortholog2880.D7G6W2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size960
Cds size960
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930439.9902122-CDS-H-paniculata_contig48678:18..7071622930439.9902122-CDS-H-paniculata_contig48678:18..707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48678 19..707 -
1691481293.1349936-CDS-H-paniculata_contig48678:18..7071691481293.1349936-CDS-H-paniculata_contig48678:18..707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48678 19..707 -
1622930440.007223-CDS-H-paniculata_contig48678:827..10981622930440.007223-CDS-H-paniculata_contig48678:827..1098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48678 828..1098 -
1691481293.145149-CDS-H-paniculata_contig48678:827..10981691481293.145149-CDS-H-paniculata_contig48678:827..1098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48678 828..1098 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48678.11998.1prot_H-paniculata_contig48678.11998.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig48678 19..1098 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig48678.11998.1

>prot_H-paniculata_contig48678.11998.1 ID=prot_H-paniculata_contig48678.11998.1|Name=mRNA_H-paniculata_contig48678.11998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
VLSATDVDALKPVCVGFMALFDAVKGAGKNRDDLIGLIDYGVLIVKSIPQ
TSTTRTILPAVKYALTTFGEEVERVIHLAGSFGGDPKPVNPIQSMEDARA
VLDGLGTIASLCKLGPASPPKLADVPVGAVTLGKSYVTRPFLLESAINHI
TNPALANAPCVLAGMGGGGKTVLASAVVRDTRVRKHFRAGIFWLRVGQNA
KEDLHTLLRGLVLELAARDKEFPPQLESLEDVTRHLTAVGAKSPLRLVVL
DDVWEGEVVDALQHTGLQLLVTTRDRAVVSVPGESVEVGNMEENEALEVL
RVGCGAFRTVELPRVEALQV
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mRNA from alignment at H-paniculata_contig48678:19..1098-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig48678.11998.1 ID=mRNA_H-paniculata_contig48678.11998.1|Name=mRNA_H-paniculata_contig48678.11998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig48678:19..1098- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCTTTCGGCGACTGATGTAGACGCCCTCAAGCCTGTGTGCGTCGGTTT CATGGCACTCTTCGACGCTGTCAAAGGGGCGGGAAAGAATAGAGACGACC TAATCGGTCTAATCGACTACGGTGTCTTGATAGTAAAGTCAATCCCACAG ACCAGTACCACAAGAACGATTTTGCCCGCGGTGAAGTACGCTCTCACGAC TTTCGGTGAAGAGGTGGAACGCGTCATACACCTGGCTGGCAGCTTTGGTG GCGATCCTAAGCCCGTCAATCGTAGAAGGCGAATATGGCGCCGACTGAAG CAGGTTTTCAAACATACCAGCATCAGCGGCGCCATCCAAGAGCATGTGAC ACGGTTCGACCGCATTTTGGCCGTGCTGGGAGCGGGCGCAGCGATTCAGA GCATGGAAGATGCCCGTGCGGTGCTTGACGGGCTTGGGACGATTGCTTCC CTCTGCAAACTTGGGCCAGCAAGTCCGCCGAAACTGGCCGACGTACCTGT AGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTGG AGAGCGCCATCAACCACATCACGAATCCGGCCCTGGCCAATGCTCCCTGT GTGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGT TGTACGGGATACGAGGGTTCGGAAGCACTTTCGTGCGGGAATATTTTGGC TGAGGGTGGGACAAAACGCTAAGGAAGATCTTCATACTTTGTTGCGAGGG CTGGTCTTGGAGTTGGCGGCAAGGGATAAGGAATTTCCTCCCCAGCTCGA AAGCTTGGAAGACGTGACGCGTCACCTAACTGCAGTTGGTGCGAAAAGCC CACTGCGCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGAT GCTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTGC CGTGGTATCTGTGCCAGGAGAGTCCGTTGAGGTAGGGAATATGGAGGAGA ACGAGGCGCTGGAGGTTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGTT GAACTTCCGCGGGTGGAAGCATTGCAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig48678:19..1098-

>mRNA_H-paniculata_contig48678.11998.1 ID=mRNA_H-paniculata_contig48678.11998.1|Name=mRNA_H-paniculata_contig48678.11998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig48678:19..1098- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCTTTCGGCGACTGATGTAGACGCCCTCAAGCCTGTGTGCGTCGGTTT
CATGGCACTCTTCGACGCTGTCAAAGGGGCGGGAAAGAATAGAGACGACC
TAATCGGTCTAATCGACTACGGTGTCTTGATAGTAAAGTCAATCCCACAG
ACCAGTACCACAAGAACGATTTTGCCCGCGGTGAAGTACGCTCTCACGAC
TTTCGGTGAAGAGGTGGAACGCGTCATACACCTGGCTGGCAGCTTTGGTG
GCGATCCTAAGCCCGTCAATCGTGCTTTCGGCGACTGATGTAGACGCCCT
CAAGCCTGTGTGCGTCGGTTTCATGGCACTCTTCGACGCTGTCAAAGGGG
CGGGAAAGAATAGAGACGACCTAATCGGTCTAATCGACTACGGTGTCTTG
ATAGTAAAGTCAATCCCACAGACCAGTACCACAAGAACGATTTTGCCCGC
GGTGAAGTACGCTCTCACGACTTTCGGTGAAGAGGTGGAACGCGTCATAC
ACCTGGCTGGCAGCTTTGGTGGCGATCCTAAGCCCGTCAATCCGATTCAG
AGCATGGAAGATGCCCGTGCGGTGCTTGACGGGCTTGGGACGATTGCTTC
CCTCTGCAAACTTGGGCCAGCAAGTCCGCCGAAACTGGCCGACGTACCTG
TAGGCGCGGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTG
GAGAGCGCCATCAACCACATCACGAATCCGGCCCTGGCCAATGCTCCCTG
TGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGG
TTGTACGGGATACGAGGGTTCGGAAGCACTTTCGTGCGGGAATATTTTGG
CTGAGGGTGGGACAAAACGCTAAGGAAGATCTTCATACTTTGTTGCGAGG
GCTGGTCTTGGAGTTGGCGGCAAGGGATAAGGAATTTCCTCCCCAGCTCG
AAAGCTTGGAAGACGTGACGCGTCACCTAACTGCAGTTGGTGCGAAAAGC
CCACTGCGCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGA
TGCTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTG
CCGTGGTATCTGTGCCAGGAGAGTCCGTTGAGGTAGGGAATATGGAGGAG
AACGAGGCGCTGGAGGTTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGT
TGAACTTCCGCGGGTGGAAGCATTGCAGGTGCGATTCAGAGCATGGAAGA
TGCCCGTGCGGTGCTTGACGGGCTTGGGACGATTGCTTCCCTCTGCAAAC
TTGGGCCAGCAAGTCCGCCGAAACTGGCCGACGTACCTGTAGGCGCGGTC
ACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTGGAGAGCGCCAT
CAACCACATCACGAATCCGGCCCTGGCCAATGCTCCCTGTGTGCTTGCCG
GCATGGGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACGGGAT
ACGAGGGTTCGGAAGCACTTTCGTGCGGGAATATTTTGGCTGAGGGTGGG
ACAAAACGCTAAGGAAGATCTTCATACTTTGTTGCGAGGGCTGGTCTTGG
AGTTGGCGGCAAGGGATAAGGAATTTCCTCCCCAGCTCGAAAGCTTGGAA
GACGTGACGCGTCACCTAACTGCAGTTGGTGCGAAAAGCCCACTGCGCTT
GGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGATGCTCTACAAC
ACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTGCCGTGGTATCT
GTGCCAGGAGAGTCCGTTGAGGTAGGGAATATGGAGGAGAACGAGGCGCT
GGAGGTTCTGAGGGTCGGCTGTGGAGCGTTTCGAACAGTTGAACTTCCGC
GGGTGGAAGCATTGCAGGTG
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