mRNA_H-paniculata_contig4865.11995.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4865.11995.1
Unique NamemRNA_H-paniculata_contig4865.11995.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 2.360e-70
Identity = 127/165 (76.97%), Postives = 145/165 (87.88%), Query Frame = 1 
Query:    1 MKFSSAVAVVACVGSASAFVPSLAPV-RVSSQTT-MSAQQNVPQGRGEFLKNAASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            MKF++ VAV+ACVGSASAFVP   P  R+S++TT MSA+   P  RG+FLK+AA AAAL G+    AAP +AEVDNP+VPFLGGGDKIDVNNANVRAYIKL GMYP+AAGKIVSNGPYSSVS+IY+IKGL+NEEKAA+KKHESRF+TMDPQAMYTIDRINNGLYR
Sbjct:    1 MKFTT-VAVLACVGSASAFVPHALPAARMSARTTTMSAES--PASRGDFLKSAAGAAALLGL----AAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA)

HSP 1 Score: 187 bits (474), Expect = 9.660e-54
Identity = 101/163 (61.96%), Postives = 127/163 (77.91%), Query Frame = 1 
Query:    1 MKFSSAVAVVACVGSASAFVPSLAPVRVSSQTTMSAQQNVPQGRGEFLKNAASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            MK + A+ + A  G A AFV   A VR S+Q +M+AQ   P  R  FLK+AA+AA    V    AAP +AE+DNP+VPFLGGGDK+D+NNANVRAYIK+PGMYP  AGK+VSNGPY++V+D+YNIKGL+ +EK+ +KK+ESRFVT++PQ MY IDRINNGLYR
Sbjct:    1 MKVTGAIVLAAACG-AQAFVAPSAGVR-STQLSMTAQ---PVDRMAFLKSAATAAV---VAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155
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BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.760e-41
Identity = 90/153 (58.82%), Postives = 103/153 (67.32%), Query Frame = 1 
Query:   31 ACVGSASAFVPSLAPVRVSSQTTMSAQQNVPQGRGEFLKNAASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            A V +A+AFVP  A      QTT     N   GR EF   AA AAA   V   AAAP  A VD   + +LGG   +D+NNANVR Y+K+PGMYP AAGKIVSNGPY SVSD+YNI GLT+ EK A+KK+ESRFV + P A Y IDRINNGLYR
Sbjct:    8 ATVATAAAFVPQQA----GPQTTA---LNAEAGRREFFGKAAGAAA---VAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN)

HSP 1 Score: 152 bits (383), Expect = 1.230e-40
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 1 
Query:  175 GVVAGA--AAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            G V GA  AAP +A+ D   +P+LGG  KID+NNAN+R Y KLPGMYP AAGKI SNGPY SVSD+YNIKGL + EKAA+KK+ESRF+T++P  MY IDR+NNGLYR
Sbjct:   31 GAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A7R9W5B1_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5B1_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.840e-39
Identity = 89/164 (54.27%), Postives = 106/164 (64.63%), Query Frame = 1 
Query:    1 MKFSSAVAVVACVGSASAFVPSLAPVRVSSQTTMSAQQNVPQGRGEFLKNAASAAALFGVVAGAA-APVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            MK +   + VAC   A+AF PS       +    S   N  QGR EFL  A + A  F  VAGAA A  V + DN  V FLGG   +DVNNANVR Y+K+PGMYP AAGK+ +NGPY SV+D+YNI GLT +EK  +KK+ESRFV + P A Y IDRINNGLYR
Sbjct:    1 MKLAVLASAVAC---AAAFAPS------QNGAPASTALNAEQGRKEFLTGALATAGAF--VAGAAPANAVRDYDN--VAFLGGSQTVDVNNANVRVYLKMPGMYPGAAGKLAANGPYKSVADVYNIPGLTAKEKEVIKKYESRFVALPPSADYVIDRINNGLYR 151
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 5.210e-39
Identity = 86/154 (55.84%), Postives = 104/154 (67.53%), Query Frame = 1 
Query:   31 ACVGSASAFVPSLAPVRVSSQTTMSAQQNVPQGRGEFLKNAASAA-ALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            A V +A+AF    AP  V   T ++A+     GR EF  +AA+AA   FGV    AAP  A VD   + +LGG   +D+NNANVR Y+K+PGMYP  AGKIVSNGPY+SVSD+YNIKGLT+ EK  +KK+ESRF    P A Y IDRINNGLYR
Sbjct:    8 ALVSAAAAFT---APQTVQQSTALNAEA----GRREFFGSAAAAAIGAFGV----AAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A7S2TDD2_PROMC (PS II complex 12 kDa extrinsic protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TDD2_PROMC)

HSP 1 Score: 147 bits (370), Expect = 7.900e-39
Identity = 77/132 (58.33%), Postives = 90/132 (68.18%), Query Frame = 1 
Query:   94 TTMSAQQNVPQGRGEFLKNAASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            TT S   N   GR EF   AA+A A    V GAAAP  A +D   + +LGG   +D+NNANVRAY+K+PGMYP  AGKIVSNGPY+SV DIY+IKGLT+ E   +KK+E RFV   P   Y IDRINNGLYR
Sbjct:    3 TTTSTALNAEAGRREFFSKAAAATA---AVVGAAAPANAVIDYENIGYLGGSSIVDLNNANVRAYLKMPGMYPTVAGKIVSNGPYASVKDIYSIKGLTSAEADVLKKYEDRFVAKTPSPDYVIDRINNGLYR 131
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A7S4RBC4_9STRA (PS II complex 12 kDa extrinsic protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBC4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.420e-38
Identity = 79/141 (56.03%), Postives = 95/141 (67.38%), Query Frame = 1 
Query:   70 APVRVSSQTTMSAQQNVPQGRGEFLKNAASAA-ALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            AP  V   T ++A+     GR EF   AA+AA   FGV    AAP  A VD   + +LGG + +D+NNANVR Y+K+PGMYP  AGKIVSNGPY+SV+D+Y IKGLT  EK  +KK+ESRF T  P   Y IDRINNGLYR
Sbjct:   36 APQAVKQSTALNAEA----GRREFFGTAAAAAIGAFGV----AAPASAVVDYEALAYLGGSNVVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVADVYKIKGLTEAEKGVLKKYESRFTTFSPSPDYVIDRINNGLYR 168
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: K0TEZ3_THAOC (PS II complex 12 kDa extrinsic protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEZ3_THAOC)

HSP 1 Score: 145 bits (366), Expect = 5.210e-38
Identity = 82/151 (54.30%), Postives = 105/151 (69.54%), Query Frame = 1 
Query:   37 VGSASAFVPSLAPVRVSSQTTMSAQQNVPQGRGEFLKNAASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            + +A+AF P+  P   ++QT ++A+      R  FL     AAA FG  A  AA   A VD   V +LGGG  +DVNNANVRAY++LPGMYP+AAGKIV++GPY SV+D+YNI GLT+ EK  +KK+ES+FV  DP A Y IDR+NNGLYR
Sbjct:   10 ISTAAAFAPNAQP---AAQTALNAEA---ADRRSFL----GAAAAFGAAAIPAA-ASARVDYENVAYLGGGSTVDVNNANVRAYLRLPGMYPSAAGKIVTHGPYKSVADVYNIPGLTSAEKEVIKKYESKFVAKDPAAEYVIDRVNNGLYR 149
[Close]
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.600e-37
Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 1 
Query:  136 EFLKNAASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQAMYTIDRINNGLYR 489
            E L + A+ +AL    A      +A+VD   +P+LGG +KID+NNANVR Y KLPGMYPNAA KI SNGPY SVSD+Y+IKGL+ +EK+ +KK+ESR +T++P AMY IDR NNGLYR
Sbjct:   41 EVLSSIAAGSALAAPFA-----AMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4865.11995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9E0_ECTSI2.360e-7076.97PS II complex 12 kDa extrinsic protein n=2 Tax=Ect... [more]
A0A836CCI8_9STRA9.660e-5461.96PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
A0A6U4G1G5_9STRA1.760e-4158.82PS II complex 12 kDa extrinsic protein n=1 Tax=Min... [more]
F0YKI8_AURAN1.230e-4067.29PS II complex 12 kDa extrinsic protein n=1 Tax=Aur... [more]
A0A7R9W5B1_9STRA3.840e-3954.27PS II complex 12 kDa extrinsic protein n=1 Tax=Pse... [more]
A0A7S2GXA3_9STRA5.210e-3955.84PS II complex 12 kDa extrinsic protein n=1 Tax=Hel... [more]
A0A7S2TDD2_PROMC7.900e-3958.33PS II complex 12 kDa extrinsic protein n=1 Tax=Pro... [more]
A0A7S4RBC4_9STRA3.420e-3856.03PS II complex 12 kDa extrinsic protein n=3 Tax=Dit... [more]
K0TEZ3_THAOC5.210e-3854.30PS II complex 12 kDa extrinsic protein n=1 Tax=Tha... [more]
A0A7S1XZL8_9STRA1.600e-3759.32PS II complex 12 kDa extrinsic protein n=1 Tax=Pha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4865contigH-paniculata_contig4865:1014..5314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.2
Seed ortholog evalue8.3e-34
Seed eggNOG ortholog44056.XP_009040947.1
KEGG koko:K02719
KEGG Pathwayko00195,ko01100,map00195,map01100
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Photosystem II 12 kDa extrinsic protein (PsbU)
EggNOG OGs2D3K6@1,2S50I@2759
Ec32 ortholog descriptionphotosystem II 12 kDa extrinsic protein
Ec32 orthologEc-28_000560.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons4
Model size1468
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4865.11995.1prot_H-paniculata_contig4865.11995.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4865 1990..5314 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930439.7245848-UTR-H-paniculata_contig4865:1013..19891622930439.7245848-UTR-H-paniculata_contig4865:1013..1989Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4865 1014..1989 -
1691481293.000729-UTR-H-paniculata_contig4865:1013..19891691481293.000729-UTR-H-paniculata_contig4865:1013..1989Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4865 1014..1989 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930439.7374508-CDS-H-paniculata_contig4865:1989..20931622930439.7374508-CDS-H-paniculata_contig4865:1989..2093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 1990..2093 -
1691481293.0248446-CDS-H-paniculata_contig4865:1989..20931691481293.0248446-CDS-H-paniculata_contig4865:1989..2093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 1990..2093 -
1622930439.7503586-CDS-H-paniculata_contig4865:2494..25771622930439.7503586-CDS-H-paniculata_contig4865:2494..2577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 2495..2577 -
1691481293.0371816-CDS-H-paniculata_contig4865:2494..25771691481293.0371816-CDS-H-paniculata_contig4865:2494..2577Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 2495..2577 -
1622930439.7688408-CDS-H-paniculata_contig4865:2752..29711622930439.7688408-CDS-H-paniculata_contig4865:2752..2971Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 2753..2971 -
1691481293.0471067-CDS-H-paniculata_contig4865:2752..29711691481293.0471067-CDS-H-paniculata_contig4865:2752..2971Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 2753..2971 -
1622930439.785352-CDS-H-paniculata_contig4865:5228..53141622930439.785352-CDS-H-paniculata_contig4865:5228..5314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 5229..5314 -
1691481293.0590835-CDS-H-paniculata_contig4865:5228..53141691481293.0590835-CDS-H-paniculata_contig4865:5228..5314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4865 5229..5314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4865.11995.1

>prot_H-paniculata_contig4865.11995.1 ID=prot_H-paniculata_contig4865.11995.1|Name=mRNA_H-paniculata_contig4865.11995.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MKFSSAVAVVACVGSASAFVPSLAPVRVSSQTTMSAQQNVPQGRGEFLKN
AASAAALFGVVAGAAAPVVAEVDNPIVPFLGGGDKIDVNNANVRAYIKLP
GMYPNAAGKIVSNGPYSSVSDIYNIKGLTNEEKAAMKKHESRFVTMDPQA
MYTIDRINNGLYR*
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mRNA from alignment at H-paniculata_contig4865:1014..5314-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4865.11995.1 ID=mRNA_H-paniculata_contig4865.11995.1|Name=mRNA_H-paniculata_contig4865.11995.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4301bp|location=Sequence derived from alignment at H-paniculata_contig4865:1014..5314- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTCTCCTCGGCTGTTGCGGTGGTGGCATGCGTAGGGTCTGCTAG
CGCCTTCGTCCCATCTTTGGCCCCCGTCCGTGTGAGGTGAGTGTGAAATA
AAGTGGTACAGATGACTTATATTACTCTTGTAGTACACACTCTTACAACA
AGGGAAGATGTCATCTGTCCACTTCCGCGTCCTCATTTGTTGAGAGGATG
TCATGCGAGACGCTTCCCTATTCAGAGCCCAGTCTAGCAAAGAGGGGGAG
GCATCGGAAAGTTCTCTCCTGAGTAGCATATCTAGAGTTTCCAGTCTGTT
GCTGTTGGACTTCCGGTGCGCTGCAACAAGCTAAGCGAGCCTATTTTTGC
TTGATGAAGGAATGTCTGGCAGTGGCCATGAAAACGTACAAAAGGGTTTT
AGGCATTCGCTGGTGCGTGCGCGATCATGACACATTTTTGTGATGTTCAA
ACGCATTTGCAAGAGCATCGGTGATTTACAAAGTGAAGGCGTGCAAGAGC
ATCGGTGATGTCAAATTGTGTATCGTGCTTGTTTAGACCTCATCTTGTGT
TGTTTTGGTGGGCGCAAGGTGTTGCGCATGCTAGCCGAAAAATGATGCCC
ACAGTTAGCCAAAATTCAAGGCCCTATATCAGTCTTTGATGGCTCCAAAA
TTGGTGCTGTCGTGAATGAGTCAACGTGAGCGTGGAAATTAAATCCAATT
GTACAGCGAACTTTCGCAGCATTCTGTGGCATGCTGTGAACGCAGCTTAC
AGGTGGTGGCGATCTTTCTGCAGATCGGACACGGAAGCCCTAGTGTCATG
ATTCCTGTGTTGTCTGATCCGCAACTGACTGTGGGGCGTTCACACAAAGA
GACATGCACACATAATTCAACATGGCGAAAATGATGTGTAATTGAATTAT
TGGATGTGCTCTCTTCGATCGAAGCATGAGTAAGGAGAATGATTGAAACA
TGACCCCGCACGGGATGGAGACAGCAATGAGGAGCCGTTGTCTAGGCATA
AGCCTGTACTTTGGTGTTTATATCGTAAGCCTTGGGTAGTTCGCGAAACC
TATTGGCATATGCGGGTAGCGTCTCCAACCGTCCTATACGATGAGCGAAT
CCATATCACGTAGTGTTACATGAAACACCGCAAGGACTTCGATCTAAACG
AGACCATCAAGTATGTAAGGGTTATCCTTTCACCCTTCGGTCTGTAGTGT
TGATTGGTATGTCAGCATATGAAGAGCATGCCGAGGATTCTACAGCTGTA
TCTCTCCAGTCTCTATGGTATCATGTTGACTCGCTTCGAACAGTGATGAC
TCACTGTCACTCTTATAGTTTGGTTGATCTAGGTGGTCATGAGGTCCTGG
CCACGCCATCCGTTATGCTAGACGTTTTACTCTTTCGTCCCTTCAAGACC
CGACCATGGGAACATGGACAGAGCAATAGTGCATGGAACGGATTATGTCA
TGTTCTCATCGTTGGTATAGAGAGATGTGTCGGACTTGAAACGCTCTCGA
TTTCGTGACCTGCTGCATCGGAACATACAGACTACAAATGTTTATGAGTC
CGTTTTTGCTCCTGTGGTGAGATCAATTTCAGATCATGGAAAGTCCGTAG
TGCACTCACGTACAGTGCGGCACGCAAGTAATATGGTGGGATATCACGCG
GTCTGAATACGTTTCTCGTGTTGTCAAGCTCCCATTTGACAATTGCACTT
GGCAGAGCAACCGTCGAGTGGTTGGTGAACGATGAATCTTCGTGATGAAC
ATGGATCACCGTCACCCATACTGAACTGTTTTAGATTCTAGATTTTCGCG
CGTTGACAAGTTCAAAACGACTCGAAGCTTGAAATGTAAAATCTTTGGCT
CGACCAGAATAGTACGCGTCAAGTGATGAATTGCAAGTTCACGTCCGCTA
TTCCCTCGGGAATAGACTCGGGGTGTAACTTATGTGTACTGGTTGGTCCA
TGAGGTGTATAGTGGCGAAGCAGGTCAACCAGTTCTAGATACGTCCACTC
TCCCGTAATACATTTCCGAAAACACAGCCTCTATGCACGCACAGTGGCAC
TATGTTCGATAGACCGGGACCCAGACCGATATCACTCTTCCTCCCCAAAC
TATGTCCAAGTCACCCGACTGAACGAATTGAACATGACTCGGGAATGGAT
TTTTTTCCTCGGTAAAGGGCGTTCAATAAATGATCCGACATTCACCGGAT
CTGGGCGGCGACCAAATCCTGAATCTCGAGTAAATGTCATTGTATCGAGG
AGGCGCAAATTCGGACATGAGTCGGATGCTCAACATTGTCGTCTGTTATT
CCCCCGTCCGACTATTCGTTGCATACTCATTTTGATGATCCAGCAGCCAG
ACCACTATGTCCGCTCAACAGAACGTACCTCAGGGGCGCGGGGAGTTCTT
GAAGAATGCTGCGAGCGCCGCCGCTTTGTTTGGTGTCGTGGCCGGTGCCG
CCGCTCCCGTCGTAGCGGAGGTGGACAACCCCATAGTACCTTTTCTTGGC
GGTGGTGACAAGATCGATGTGAACAACGCCAACGTTCGCGCTTACATCAA
GCTCCCGGGAATGTGAGTCTTGTAGTGTAGCAATGTTGAAGCTTCGAATG
CCTTCATGTCAGGAATAAGAGTTTTCACATGGTGAATTTGTTAACATTTC
TTGGCGTGGGTGCAGTTCATGCTCAATGATATAAACGATAGTCATCTACG
GTTCTTGAACCTCTGTTGTCTCATACCTTGATTTCAGGTACCCGAACGCG
GCGGGGAAGATCGTATCGAATGGCCCATACTCATCCGTTTCGGACATCTA
CAACATCAAGGGACTCACCAGTGAGTTATCTGTACTAGGGAGAGCTGAGA
CTGATTGGTTTAAAAATTCATGACAACCCATTATACAGCCCGTGCTTTGC
TGAGTCAGTATCTACAGTGCAATGAGCGTCAGCGCCTCCTTGGACAGGTC
TTGCTGTAATTCTGATGCGTAGCACAACATATGGATTATGAGGTGGATGA
TCTGCCATGCTTATTTCGAAGCTCGGGAACCTAGACAACCCCACACTGGT
GTGCACTTTATTCTATTGCCTGCTCTGCGAAAACTTGACCTGATATTGTT
GGTTCTTCTCTGCGAATACGCCAACTCCGGTCTTTTTGGGCGGTGGTACA
CCTTGTCGGGTGTAGACCTTATTCGCTTCATGCGATGTGACCGTTACTAC
CTTACGTTTTGTCTTCTGCAGATGAGGAGAAGGCGGCAATGAAGAAGCAC
GAGAGCAGGTTCGTCACCATGGACCCACAGGCGATGTACACCATCGACCG
CATCAACAACGGCCTTTACCGGTAAAGGAATTGGTCGAGTACGACAATTT
TTGTCCGTTGTGGAAGTAACCTTTTCGATCAGAGGTGGCCACGAAGGAGA
GGTGGAGGGGACAGCGACGAGCGTAATGTGAAATAAACACGGTGCTTTGT
GACCGATATTTTGATTCACAGCTTGCCCAACATCTGTGTGTTTTCCTCGA
GGATTTGAGGCGATCTGTTGTGGAAATATGGATGTTTCGAGTCCACACTT
GTGGGAGGGTCTGTAGACATGCCGCTGTTCCTTGTAGATGTGAACGAGGA
AGTTGCGTGGTTAGATGACTTGTTTGGAGAAGTGTGCACCTGGGGTGTGT
AGAAGTTGCTCTTGTGTCCTACTGTCCACTGGTTTTGCTTTCATCGGGAC
TTCTGACAAAAGTTGTCGCTGCTCCGAATTCTGCTGCTTGGGTTATTGGT
CATGACTTGGAGGGTGGGTAAGTTCCTACTCTTCCGTGGAAGGTCCGAGC
CCTGTGTCCGTGTGGAGGACTGGCTTGATTAATTGGCTTGCTTGGGATAT
GTGATCTTACCAGATTTGGTACATTCTTTTCGCTAGCCATCTTGTTTTTC
TCGAGTGAAAACTCAAGTGCTAACAAGCCTTCGCTTCCTGTTGTCTAGAG
CTGATTTACTGTGTTTTTTTGTGGTAATAGCATAGTCGACAGCGGTCTAT
GTGTTTTGGTAACCACATGCGAGTTTGGTGCGCACGTAGCAGGTATAAAG
GCAGATGGAGTGACGGACAGCGCTGCACGCGCGGTTTCCACCCTTTCTGA
ATGAAATAATAGTACCGCAGGGCTTGAAAAGGGCACGCGACGGCGCGTAT
TGCGGGCCCGCACGTGATTCCATGCCAGGCTCTTCCCCTACACTTGGTGA
AGATCTATACCTTGTTGACCGCAAACACAGAAAAAAATCAGTTGGAAGAT
AAAGTGAATCCAATGCCAACAGAGCCAAGTCCGAGCAAAAATGAAAGCGA
C
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Coding sequence (CDS) from alignment at H-paniculata_contig4865:1014..5314-

>mRNA_H-paniculata_contig4865.11995.1 ID=mRNA_H-paniculata_contig4865.11995.1|Name=mRNA_H-paniculata_contig4865.11995.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig4865:1014..5314- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTCTCCTCGGCTGTTGCGGTGGTGGCATGCGTAGGGTCTGCTAG
CGCCTTCGTCCCATCTTTGGCCCCCGTCCGTGTGAGATGAAGTTCTCCTC
GGCTGTTGCGGTGGTGGCATGCGTAGGGTCTGCTAGCGCCTTCGTCCCAT
CTTTGGCCCCCGTCCGTGTGAGCAGCCAGACCACTATGTCCGCTCAACAG
AACGTACCTCAGGGGCGCGGGGAGTTCTTGAAGAATGCTGCGAGCGCCGC
CGCTTTGTTTGGTGTCGTGGCCGGTGCCGCCGCTCCCGTCGTAGCGGAGG
TGGACAACCCCATAGTACCTTTTCTTGGCGGTGGTGACAAGATCGATGTG
AACAACGCCAACGTTCGCGCTTACATCAAGCTCCCGGGAATCAGCCAGAC
CACTATGTCCGCTCAACAGAACGTACCTCAGGGGCGCGGGGAGTTCTTGA
AGAATGCTGCGAGCGCCGCCGCTTTGTTTGGTGTCGTGGCCGGTGCCGCC
GCTCCCGTCGTAGCGGAGGTGGACAACCCCATAGTACCTTTTCTTGGCGG
TGGTGACAAGATCGATGTGAACAACGCCAACGTTCGCGCTTACATCAAGC
TCCCGGGAATGTACCCGAACGCGGCGGGGAAGATCGTATCGAATGGCCCA
TACTCATCCGTTTCGGACATCTACAACATCAAGGGACTCACCAGTACCCG
AACGCGGCGGGGAAGATCGTATCGAATGGCCCATACTCATCCGTTTCGGA
CATCTACAACATCAAGGGACTCACCAATGAGGAGAAGGCGGCAATGAAGA
AGCACGAGAGCAGGTTCGTCACCATGGACCCACAGGCGATGTACACCATC
GACCGCATCAACAACGGCCTTTACCGGTAAATGAGGAGAAGGCGGCAATG
AAGAAGCACGAGAGCAGGTTCGTCACCATGGACCCACAGGCGATGTACAC
CATCGACCGCATCAACAACGGCCTTTACCGGTAA
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