prot_H-paniculata_contig48644.11993.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48644.11993.1
Unique Nameprot_H-paniculata_contig48644.11993.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
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BLAST of mRNA_H-paniculata_contig48644.11993.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.880e-10
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0 
Query:    6 GGPVDLLVDSGATSHFIDTELTPRLQERLQDFKLLDKSMPIETAGKHVVYGVAEGIVDGSIIDSKGQQRHVHLRFIPVPGLGHNLFSVKIAARQGVTTI 104
            G P +  + SGA+ H++D+EL P L+  L DF  +     I  AG   + G ++GI+     D +G  R V  +   VPGLG +LFS   A ++G  TI
Sbjct:  302 GLPAEYHLISGASGHYLDSELLPDLENILDDFTYITTPTKIIGAGGIELEGTSKGIISVFAKDEEGNDRRVRFKCTVVPGLGRHLFSTGTAQKKGANTI 400
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48644.11993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY84_9PHAE1.880e-1036.36Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48644contigH-paniculata_contig48644:43..357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48644.11993.1mRNA_H-paniculata_contig48644.11993.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48644 43..357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48644.11993.1 ID=prot_H-paniculata_contig48644.11993.1|Name=mRNA_H-paniculata_contig48644.11993.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MDATTGGPVDLLVDSGATSHFIDTELTPRLQERLQDFKLLDKSMPIETAG
KHVVYGVAEGIVDGSIIDSKGQQRHVHLRFIPVPGLGHNLFSVKIAARQG
VTTIF
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