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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1517 |
| Cds size | 1218 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4863.11991.1 >prot_H-paniculata_contig4863.11991.1 ID=prot_H-paniculata_contig4863.11991.1|Name=mRNA_H-paniculata_contig4863.11991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=406bp
MSQPAFKTGSNRCSATAAMKSFTMPVTPCAAGTQKGRNGVQALPHPVGKH
HGPIDGALRIGGGTTMAPRKSCTTDGGGGGGEALMEMFERARSKTAAAIL
GNENATPTSPSTSPSASASADQNIQDDPQDVSDIVLACLPEQQQHRGCNN
DDADAAAAGGVVGDRNDPSPDLSTVFANPFARKQTPAATRTPDVIFDSSS
FLTPAVVSAGGVHSQSNSKAANSISRNVLGAGIDAWSRLGQGRPSVRAGG
GTPQGCQGSNANQAAEVAEAIQASQADRTFTVQSIGQPDNSAGGKSDQIE
HASSPPPITPGRESSRCSILDVAEVRRPTLSSSNRSKRPLPNVSIVQGQG
VAHGVKKAGSQGAKKARQGAGRRGVLRPSEVASRKDTRTMLSFFGPAVAT
PNASL* back to topmRNA from alignment at H-paniculata_contig4863:9533..11688- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4863.11991.1 ID=mRNA_H-paniculata_contig4863.11991.1|Name=mRNA_H-paniculata_contig4863.11991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2156bp|location=Sequence derived from alignment at H-paniculata_contig4863:9533..11688- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCATCGCCTGGAGAAACCTGCTTCCTAGGGTAAGCAAAGAAAGGCTGGC
TTACGCACCGCACGTTGTTCCGAAAGTTGCCGGTATCAATAATCCCCATT
AACGACCACTATTAGCATGTAGGTTAATATGGCGTTAACGGCAGTGCGTC
TGTTCTTTATGCAGCATTGCCAGACTAAACTTGGGTTAGTTTTGTGCTTA
GTCGATGTTCTGCCACTTTCCAATATTTGTGTCCTGCCCATTATTTGCTT
ATTTGATTCTCTACACGTCGTGCCGTATATACTCTTGTTCCTCGGAGTAA
TCGCTACGCTGCCGAAATACTTCCAAAAAAATACAAGACGTAGATCTGTT
GGCTGTTACGCAGCGGGCTCTGAGACTAATGAACCAAGGCATTACAGACA
ATTGCGTCCCCGCGCTTCCTCGCCCCGTAACGTGTAGTTAATTTTTGCAT
TTTATACGCACTGATCTCCGAGACTTGTCGTGTTTAGCCACGAGGCGGGT
AAGCGCGGCGTACTTCGGCCGCGGGCTACTACATACTCGTACTATATACC
GCCACAAGGCGAGATTAAGATATAATTGTCGCACACGGTATAGTAGATTT
CATCCCCGCTTATCTCCCGCTTGGGTGAAAATATTCCACTATGCCCCCCT
CCCGTCGTCCGTACGGCAGGGAACACATTGACGACACCCTCATCGTCAGA
ATAGCGCGCGGAGAGGTGGATCCAGACACGGGATTGGCGGTCCAAGCGGA
GGTTACGGTCACCTCCACTCCTACCCTCACCCCCTCCGCCAAGAGGAACA
ACAGCAACCTCCGTCGCCGTTCCATGAGCCAACCCGCTTTCAAAACAGGG
TCTAACCGGTGCTCCGCCACTGCCGCGATGAAAAGCTTCACAATGCCGGT
TACTCCTTGCGCTGCCGGGACCCAGAAGGGGAGGAACGGAGTTCAAGCGC
TGCCTCATCCCGTGGGCAAGCATCATGGACCAATCGACGGAGCACTGCGA
ATTGGTGGCGGGACGACGATGGCACCCAGGAAAAGTTGTACTACAGACGG
TGGTGGTGGTGGTGGTGAGGCTCTCATGGAAATGTTCGAGCGCGCGAGGT
CGAAGACTGCAGCAGCGATATTGGGAAATGAAAACGCGACGCCGACATCA
CCATCAACATCGCCGTCAGCATCAGCATCGGCCGATCAAAACATCCAAGA
TGACCCTCAGGACGTGTCGGATATCGTATTGGCTTGTCTGCCTGAACAGC
AGCAGCATCGTGGTTGTAATAATGATGATGCTGATGCTGCTGCAGCTGGT
GGTGTCGTAGGGGACCGTAACGACCCGTCTCCCGATCTCTCCACGGTATT
CGCGAATCCTTTCGCCAGGAAGCAGACACCCGCCGCAACGCGTACACCTG
ACGTTATCTTCGACTCGTCCAGCTTTCTCACGCCCGCGGTCGTCAGCGCC
GGTGGCGTCCACTCCCAAAGCAACAGCAAAGCGGCGAACTCTATCTCTCG
GAATGTCTTGGGAGCCGGGATAGACGCATGGTCCCGACTTGGACAAGGCC
GCCCGTCGGTGCGCGCAGGTGGCGGCACGCCGCAAGGTTGTCAGGGCAGC
AATGCGAACCAGGCAGCAGAAGTGGCTGAGGCAATTCAAGCATCGCAAGC
AGATCGAACGTTTACCGTGCAAAGCATCGGTCAACCTGATAACAGCGCGG
GGGGCAAGAGTGACCAGATTGAGCACGCATCGTCACCGCCACCAATAACA
CCAGGCCGGGAATCCAGCCGCTGCAGTATACTTGATGTTGCCGAGGTTCG
GCGACCGACCTTGAGCAGTAGCAACAGAAGCAAGCGACCGCTTCCGAATG
TCAGCATAGTGCAGGGCCAAGGAGTTGCGCACGGGGTGAAGAAGGCAGGG
AGCCAAGGGGCGAAGAAAGCTAGGCAGGGAGCAGGTAGACGAGGCGTGTT
GCGGCCGTCCGAAGTCGCGAGTAGGAAGGATACACGTACTATGCTGTCGT
TCTTTGGTCCAGCGGTTGCAACGCCGAATGCATCATTGTGAGCAGAAACC
TTGATCAAGGGGTTGGATTAAAACAAACTGCTCCCCGGCGAAAATTGAAG
TGCGTATTCTAGTGTTTGTGTTGTTTGATGATGATGGTGCTGGCATTCCG
ATAGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4863:9533..11688- >mRNA_H-paniculata_contig4863.11991.1 ID=mRNA_H-paniculata_contig4863.11991.1|Name=mRNA_H-paniculata_contig4863.11991.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2436bp|location=Sequence derived from alignment at H-paniculata_contig4863:9533..11688- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCCAACCCGCTTTCAAAACAGGGTCTAACCGGTGCTCCGCCACTGC
CGCGATGAAAAGCTTCACAATGCCGGTTACTCCTTGCGCTGCCGGGACCC
AGAAGGGGAGGAACGGAGTTCAAGCGCTGCCTCATCCCGTGGGCAAGCAT
CATGGACCAATCGACGGAGCACTGCGAATTGGTGGCGGGACGACGATGGC
ACCCAGGAAAAGTTGTACTACAGACGGTGGTGGTGGTGGTGGTGAGGCTC
TCATGGAAATGTTCGAGCGCGCGAGGTCGAAGACTGCAGCAGCGATATTG
GGAAATGAAAACGCGACGCCGACATCACCATCAACATCGCCGTCAGCATC
AGCATCGGCCGATCAAAACATCCAAGATGACCCTCAGGACGTGTCGGATA
TCGTATTGGCTTGTCTGCCTGAACAGCAGCAGCATCGTGGTTGTAATAAT
GATGATGCTGATGCTGCTGCAGCTGGTGGTGTCGTAGGGGACCGTAACGA
CCCGTCTCCCGATCTCTCCACGGTATTCGCGAATCCTTTCGCCAGGAAGC
AGACACCCGCCGCAACGCGTACACCTGACGTTATCTTCGACTCGTCCAGC
TTTCTCACGCCCGCGGTCGTCAGCGCCGGTGGCGTCCACTCCCAAAGCAA
CAGCAAAGCGGCGAACTCTATCTCTCGGAATGTCTTGGGAGCCGGGATAG
ACGCATGGTCCCGACTTGGACAAGGCCGCCCGTCGGTGCGCGCAGGTGGC
GGCACGCCGCAAGGTTGTCAGGGCAGCAATGCGAACCAGGCAGCAGAAGT
GGCTGAGGCAATTCAAGCATCGCAAGCAGATCGAACGTTTACCGTGCAAA
GCATCGGTCAACCTGATAACAGCGCGGGGGGCAAGAGTGACCAGATTGAG
CACGCATCGTCACCGCCACCAATAACACCAGGCCGGGAATCCAGCCGCTG
CAGTATACTTGATGTTGCCGAGGTTCGGCGACCGACCTTGAGCAGTAGCA
ACAGAAGCAAGCGACCGCTTCCGAATGTCAGCATAGTGCAGGGCCAAGGA
GTTGCGCACGGGGTGAAGAAGGCAGGGAGCCAAGGGGCGAAGAAAGCTAG
GCAGGGAGCAGGTAGACGAGGCGTGTTGCGGCCGTCCGAAGTCGCGAGTA
GGAAGGATACACGTACTATGCTGTCGTTCTTTGGTCCAGCGGTTGCAACG
CCGAATGCATCATTGTGAATGAGCCAACCCGCTTTCAAAACAGGGTCTAA
CCGGTGCTCCGCCACTGCCGCGATGAAAAGCTTCACAATGCCGGTTACTC
CTTGCGCTGCCGGGACCCAGAAGGGGAGGAACGGAGTTCAAGCGCTGCCT
CATCCCGTGGGCAAGCATCATGGACCAATCGACGGAGCACTGCGAATTGG
TGGCGGGACGACGATGGCACCCAGGAAAAGTTGTACTACAGACGGTGGTG
GTGGTGGTGGTGAGGCTCTCATGGAAATGTTCGAGCGCGCGAGGTCGAAG
ACTGCAGCAGCGATATTGGGAAATGAAAACGCGACGCCGACATCACCATC
AACATCGCCGTCAGCATCAGCATCGGCCGATCAAAACATCCAAGATGACC
CTCAGGACGTGTCGGATATCGTATTGGCTTGTCTGCCTGAACAGCAGCAG
CATCGTGGTTGTAATAATGATGATGCTGATGCTGCTGCAGCTGGTGGTGT
CGTAGGGGACCGTAACGACCCGTCTCCCGATCTCTCCACGGTATTCGCGA
ATCCTTTCGCCAGGAAGCAGACACCCGCCGCAACGCGTACACCTGACGTT
ATCTTCGACTCGTCCAGCTTTCTCACGCCCGCGGTCGTCAGCGCCGGTGG
CGTCCACTCCCAAAGCAACAGCAAAGCGGCGAACTCTATCTCTCGGAATG
TCTTGGGAGCCGGGATAGACGCATGGTCCCGACTTGGACAAGGCCGCCCG
TCGGTGCGCGCAGGTGGCGGCACGCCGCAAGGTTGTCAGGGCAGCAATGC
GAACCAGGCAGCAGAAGTGGCTGAGGCAATTCAAGCATCGCAAGCAGATC
GAACGTTTACCGTGCAAAGCATCGGTCAACCTGATAACAGCGCGGGGGGC
AAGAGTGACCAGATTGAGCACGCATCGTCACCGCCACCAATAACACCAGG
CCGGGAATCCAGCCGCTGCAGTATACTTGATGTTGCCGAGGTTCGGCGAC
CGACCTTGAGCAGTAGCAACAGAAGCAAGCGACCGCTTCCGAATGTCAGC
ATAGTGCAGGGCCAAGGAGTTGCGCACGGGGTGAAGAAGGCAGGGAGCCA
AGGGGCGAAGAAAGCTAGGCAGGGAGCAGGTAGACGAGGCGTGTTGCGGC
CGTCCGAAGTCGCGAGTAGGAAGGATACACGTACTATGCTGTCGTTCTTT
GGTCCAGCGGTTGCAACGCCGAATGCATCATTGTGA back to top
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