mRNA_H-paniculata_contig4862.11989.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: D8LTZ6_ECTSI (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ6_ECTSI) HSP 1 Score: 558 bits (1439), Expect = 4.440e-196 Identity = 273/315 (86.67%), Postives = 295/315 (93.65%), Query Frame = 1
Query: 76 VKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNGGIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKV 1020
V+VAINGFGRIGRCLFRFLWEM DV EIVLVNEIVGGAETAGYLLKYDSIHG W +EVDFE DSF+VDGK++AVT N IADTDWAS+GVDVVCCCTG F TK+ L+PY +GG+KRVVVSAPVKEEGVLNVVMGCNDDLL++EH+ICTAASCTTNCLAPVVKVIHE LGIAHGCITT+HNVTGTQPI+DMAMTKKKDLRRCR+GMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKR+TTG EVNELLKAASE+G LK IMG+ETRPLVSTDYTNDERS I+DARSTMV+D TCVK+
Sbjct: 6 VRVAINGFGRIGRCLFRFLWEMPDV-EIVLVNEIVGGAETAGYLLKYDSIHGPWGREVDFEGDADSFSVDGKRVAVTINAKIADTDWASHGVDVVCCCTGVFLTKEKLQPYFDGGVKRVVVSAPVKEEGVLNVVMGCNDDLLSDEHVICTAASCTTNCLAPVVKVIHEKLGIAHGCITTIHNVTGTQPIIDMAMTKKKDLRRCRSGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRETTGMEVNELLKAASEDGPLKGIMGYETRPLVSTDYTNDERSGIVDARSTMVVDGTCVKI 319
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A835Z637_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z637_9STRA) HSP 1 Score: 442 bits (1136), Expect = 3.270e-150 Identity = 219/321 (68.22%), Postives = 260/321 (81.00%), Query Frame = 1
Query: 70 MVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNGGIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFF 1032
MVVKVAINGFGRIGRCLFRFL + ++V +NE++GGAET YLL++DSIHGT+ KEV+ F+V+G+ I+ + + I DWA+ GV VVC CTG F TK L PY G+ RVVVSAPVKEEGVLNVV+G ND LL+ +H ICTAASCTTNCLAPVVKV+HENL I HG ITT+HNVTGTQP++DM MTKKKDLRRCR+GM NL PTSTGSATAI IFPELKGKLNG+AIRVP+LN+SITDCVFEV++ TT EVN L+KAAS+EGSLK ++GFETR LVS DYTNDERS I+DA STMV++ TCVK+ ++
Sbjct: 1 MVVKVAINGFGRIGRCLFRFL---EEDPKVVHINEVIGGAETGAYLLQFDSIHGTYSKEVEAAADDSGFSVNGRFISYSGEKTIEAVDWANKGVQVVCDCTGVFLTKAKLAPYFAAGVSRVVVSAPVKEEGVLNVVVGVNDHLLSTDHTICTAASCTTNCLAPVVKVVHENLVIKHGSITTIHNVTGTQPLIDMVMTKKKDLRRCRSGMTNLCPTSTGSATAITNIFPELKGKLNGMAIRVPLLNASITDCVFEVEKATTKEEVNALMKAASKEGSLKGVLGFETRALVSCDYTNDERSGIVDADSTMVVNGTCVKLYVWY 318
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A835YYT8_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT8_9STRA) HSP 1 Score: 436 bits (1122), Expect = 4.970e-148 Identity = 214/321 (66.67%), Postives = 259/321 (80.69%), Query Frame = 1
Query: 70 MVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNGGIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFF 1032
MVVKVAINGFGRIGRCLFRFL E VAE+V VNE++GGAET YLL++DS+HG + K + + F VDG+ + + + I DWA+ GV +VC CTG F TK L+PYL G++RVVVSAPVKEEGVLNVV+G ND LL +H ICTAASCTTNCLAPVVKVIHENL I HG ITT+H+VTGTQP+VDM MTKKKDLRRCR+GM+++APTSTGSATAI IFP+LKGKLNG+A+RVP+LN SITDCVFEV+R+T+ EVN LL AA+ EG LK I+G+ETRPLVS DY N+ERS ++DA STMV++ TCVK+ ++
Sbjct: 1 MVVKVAINGFGRIGRCLFRFLEEDPTVAEVVHVNELLGGAETGAYLLEFDSVHGRYAKTIVNLEDDSGFTVDGRLVTFSNEKTIEAVDWAAKGVQLVCDCTGVFLTKAKLQPYLAAGVQRVVVSAPVKEEGVLNVVVGVNDTLLGTQHTICTAASCTTNCLAPVVKVIHENLRIKHGVITTIHDVTGTQPLVDMPMTKKKDLRRCRSGMVSMAPTSTGSATAITNIFPDLKGKLNGMAVRVPLLNGSITDCVFEVERETSVEEVNGLLSAAASEGPLKGILGYETRPLVSVDYINEERSGVVDAPSTMVVNGTCVKLYVWY 321
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A6T0B0G3_CHRCT (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0B0G3_CHRCT) HSP 1 Score: 404 bits (1037), Expect = 1.130e-134 Identity = 210/338 (62.13%), Postives = 258/338 (76.33%), Query Frame = 1
Query: 73 VVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG-GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLK------DIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFSNSTS 1065
+V+V INGFGRIGR FR+ WEM + EIV VNEIVGGAETA YL+++DS+HGTW ++ + A +F VDGK++A + ++ DW GV++V CTGKF + + L PY+N G+KRVVVSAPVKE VLNVV+G NDD L E HLICTAASCTTNC+APV+KVIHE LGI G ITTVHN+TGTQ +VDM +KKKDLRR R+GMLNLAPTSTGSATA+A +FPELKGKLNG AIRVPMLNSSITD VF + R+TT AEVN LL+ A+ EG+L +I+GFETRPLVSTDY ND RS+I+DA STMV+ +KV ++ + +S T+
Sbjct: 27 MVRVGINGFGRIGRLTFRYAWEMEGI-EIVAVNEIVGGAETAAYLVQFDSVHGTWSRKCESTSAT-AFTVDGKEVAFSEEKDFTKVDWKGMGVEIVVDCTGKFLSSEVLMPYINECGVKRVVVSAPVKEPSVLNVVVGVNDDKLNESHLICTAASCTTNCIAPVIKVIHEKLGIETGMITTVHNITGTQSLVDMPNSKKKDLRRSRSGMLNLAPTSTGSATAVAEVFPELKGKLNGHAIRVPMLNSSITDMVFNLARETTVAEVNGLLQDAAAEGALAATAEHGEILGFETRPLVSTDYVNDVRSTIVDASSTMVVGGKMLKVYAWYDNEAGYSMRTA 362
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A448ZIE6_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZIE6_9STRA) HSP 1 Score: 398 bits (1023), Expect = 6.460e-133 Identity = 208/349 (59.60%), Postives = 254/349 (72.78%), Query Frame = 1
Query: 70 MVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG-GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFSNSTS-----TPGMTTSGDIP 1098
MVVK A+NGFGRIGR FR+ WE + EIV VN++ E+A YL++YDS+HGTWD++V+ + F VDGK + T + + DWAS V+++ CTGKF K+L+PY + GIK+VVVSAPVKEEG LNVV+GCN +LL++E + T ASCTTNCLAPVVKVI E GI HGCITT+H+VTGTQ IVDM TKK DLRR R+GM NL PTSTGSATAI I+PELKGKLNGLA+RVP+LN S+TDCVF VKR T EVNE L+ ASE G LK I+GFET+PLVS+DYTND RSSI+DA ST VID T VK+ ++ + +S + T M SG P
Sbjct: 1 MVVKCAVNGFGRIGRLTFRYAWEDPSL-EIVHVNDVCS-VESAAYLIQYDSVHGTWDRKVEVTEDGSGFTVDGKLVTFTCEGDFTNVDWASKNVELMMECTGKFLKVKTLQPYFDECGIKQVVVSAPVKEEGALNVVLGCNHELLSKETKLVTNASCTTNCLAPVVKVIREKFGIVHGCITTIHDVTGTQTIVDMPNTKKSDLRRARSGMTNLCPTSTGSATAIIEIYPELKGKLNGLAVRVPLLNGSLTDCVFVVKRSVTKEEVNEALREASESGPLKGILGFETKPLVSSDYTNDTRSSIVDALSTQVIDGTLVKIYAWYDNEAGYSKRMAELCSITAAMNISGIEP 347
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: B8C783_THAPS (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C783_THAPS) HSP 1 Score: 397 bits (1021), Expect = 1.340e-132 Identity = 204/330 (61.82%), Postives = 249/330 (75.45%), Query Frame = 1
Query: 73 VVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG-GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRK--TTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFS 1053
+V A+NGFGRIGR LFR+ WE + +IV VN++ E+A YL+KYDS+HGTWDKEV+ + + F VDGK + T ++ DW+ VD+V CTGKF T K L+PY + G+KRVVVSAPVKE+G LNVV+GCN LL EE + T ASCTTNCLAPVVKVI EN GI HGCITTVH+VTGTQ IVDM TKK DLRR R+GMLNL PTSTGSATAI I+PELKGKLNGLAIRVP+LN+S+TDCVFE++++ T EVN LK ASEEG LK ++G+ET+PLVSTDYTND RS IIDA ST VID + +K+ ++ + +S
Sbjct: 1 MVTCAVNGFGRIGRLLFRYAWE-DPLLDIVHVNDLCS-CESAAYLIKYDSVHGTWDKEVEMAEDGNGFTVDGKLVTFTREKDFTKVDWSGMAVDMVMECTGKFLTVKDLQPYFDECGVKRVVVSAPVKEDGALNVVLGCNHGLLTEELKLVTNASCTTNCLAPVVKVIKENFGIKHGCITTVHDVTGTQTIVDMPNTKKSDLRRARSGMLNLCPTSTGSATAIVEIYPELKGKLNGLAIRVPLLNASLTDCVFEIEKEGGVTREEVNAALKKASEEGPLKGLLGYETKPLVSTDYTNDTRSCIIDALSTQVIDGSMIKIYAWYDNECGYS 328
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A7S4QQS8_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4QQS8_9STRA) HSP 1 Score: 397 bits (1020), Expect = 1.840e-132 Identity = 203/329 (61.70%), Postives = 254/329 (77.20%), Query Frame = 1
Query: 70 MVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG-GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFS 1053
++VK A+NGFGRIGR +F++ W+ EIV VN++ E+A YL+KYDS+HGTW+KEV E+ + F VDGK + ++++ D D+A+ GV++V CTGKF +L PY G+KRVVVSAPVKEEG LNVV+GCN+ LL+EE + T ASCTTNCLAPVV+V+ EN GI HGCITTVH+VTGTQ +VDM TKK DLRR R+GMLNL PTSTGSATAI I+PELKGKLNGLAIRVP+LN+S+TDCVFEV++ TT EVN LKAA+E G LK I+G+ET+PLVSTDYTND RSSI+DA ST VID T VK+ ++ + +S
Sbjct: 3 IMVKCAVNGFGRIGRLVFKYAWD-DPTLEIVHVNDVCS-LESAAYLVKYDSVHGTWNKEV--EETDNGFTVDGKLVTFSSHKEYTDIDFAAMGVEMVMECTGKFLKVSNLSPYFEKCGMKRVVVSAPVKEEGALNVVLGCNNQLLSEEMKLVTNASCTTNCLAPVVRVVKENFGIKHGCITTVHDVTGTQTLVDMPNTKKSDLRRARSGMLNLCPTSTGSATAIVEIYPELKGKLNGLAIRVPLLNASLTDCVFEVEKPTTVEEVNAALKAATESGPLKGILGYETKPLVSTDYTNDTRSSIVDALSTQVIDGTMVKIYAWYDNEAGYS 327
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A7S1Z8E0_TRICV (Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z8E0_TRICV) HSP 1 Score: 397 bits (1019), Expect = 6.330e-132 Identity = 206/334 (61.68%), Postives = 250/334 (74.85%), Query Frame = 1
Query: 55 ATEQTMVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG-GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFS 1053
+T + +VK A+NGFGRIGR +FR+ ++ E+V VN++ E+A YL+K+DS+HGTWDKEV+ DSF VDGK + + + + DWAS GV++V CTGKF K+L PY + G+KRVVVSAPVKE LNVV+GCN LL EE + T ASCTTNCLAPVVKVI EN GI HGCITT+H+VTGTQ +VDM TKK DLRR R+GMLNL PTSTGSATAI I+PELKGKLNGLA+RVP+LN SITDCVFEV+R T EVNE LK ASEEG LK I+G+ETRPLVSTDY N+ RSS+IDA ST VID T VK+ ++ + +S
Sbjct: 23 STNERTMVKCAVNGFGRIGRLVFRYAFD-DPTLELVHVNDLCS-LESAAYLVKFDSVHGTWDKEVEVA-GDDSFTVDGKPVTFSQKADYTEVDWASMGVEMVMECTGKFLKVKNLSPYFDKCGVKRVVVSAPVKEAEALNVVLGCNHGLLKEEQRLVTNASCTTNCLAPVVKVIKENFGIRHGCITTIHDVTGTQTLVDMPNTKKSDLRRARSGMLNLCPTSTGSATAIVEIYPELKGKLNGLAVRVPVLNGSITDCVFEVERSVTVDEVNEALKKASEEGPLKGILGYETRPLVSTDYINEMRSSVIDAPSTQVIDGTMVKIYAWYDNEAGYS 353
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A7R9ZI64_9STRA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZI64_9STRA) HSP 1 Score: 394 bits (1013), Expect = 1.960e-131 Identity = 202/330 (61.21%), Postives = 247/330 (74.85%), Query Frame = 1
Query: 70 MVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG--GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFS 1053
M +K A+NGFGRIGR +FR+ W+ EIV VN++ E+A YL++YDS+HGTW+K+V+ D+ SF VD K + + + DW GVD+V CTGKF K+LEPY G+KRVVVSAPVKEEG LNVV+GCN LL +E + T ASCTTNCLAPVV+VI EN GI HGCITTVH+VTGTQ +VDM TKK DLRR R+GMLNL PTSTGSATAI I+PELKGKLNGLAIRVP+LN+S+TDCVFEV++ TT EVN LKAASE G LK I+G+E +PLVSTDYTND RSS++DA ST V+D T VK+ ++ + +S
Sbjct: 1 MPIKCALNGFGRIGRLVFRYAWD-DPTLEIVHVNDVCS-CESASYLVQYDSVHGTWEKKVERVDST-SFTVDDKTVTFSQEADFTKVDWKGLGVDMVMECTGKFLKVKTLEPYFEEKCGVKRVVVSAPVKEEGALNVVLGCNHQLLTDEMKLVTNASCTTNCLAPVVRVIKENFGIKHGCITTVHDVTGTQTLVDMPNTKKSDLRRARSGMLNLCPTSTGSATAIVEIYPELKGKLNGLAIRVPLLNASLTDCVFEVEKSTTVEEVNAALKAASESGPLKGILGYEVKPLVSTDYTNDTRSSVVDALSTQVVDGTLVKIYAWYDNEAGYS 327
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Match: A0A1E7F5I8_9STRA (Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5I8_9STRA) HSP 1 Score: 394 bits (1013), Expect = 2.030e-131 Identity = 206/349 (59.03%), Postives = 253/349 (72.49%), Query Frame = 1
Query: 73 VVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDSIHGTWDKEVDFEDAKDSFAVDGKKIAVTTNQNIADTDWASYGVDVVCCCTGKFTTKKSLEPYLNG-GIKRVVVSAPVKEEGVLNVVMGCNDDLLAEEHLICTAASCTTNCLAPVVKVIHENLGIAHGCITTVHNVTGTQPIVDMAMTKKKDLRRCRAGMLNLAPTSTGSATAIATIFPELKGKLNGLAIRVPMLNSSITDCVFEVKRKTTGAEVNELLKAASEEGSLKDIMGFETRPLVSTDYTNDERSSIIDARSTMVIDDTCVKVRFFFHVQICFSNSTS-----TPGMTTSGDIPS 1101
+VK A+NGFGRIGR FR+ WE +IV VN++ E+A YL+KYDS+HGTW+KEV+ + F VDGK + ++ ++ + DW+S GV+++ CTGKF +LEPY GIK+VVVSAPVKEEG LNVV+GCN + L+ E + T ASCTTNCLAPVVKVI EN GI HGCITT+H+VTGTQ IVDM TKK DLRR R+GM NL PTSTGSATAI I+PELK KLNGLA+RVP+LN S+TDCVFEVKR T EVN LKAASE G LK I+G+ET+PLVS+DYT+D RSSIIDA ST VID T VK+ ++ + +S + T M +G PS
Sbjct: 1 MVKCAVNGFGRIGRLTFRYAWE-DPTLDIVHVNDVCS-VESAAYLIKYDSVHGTWNKEVEINEDGSGFTVDGKLVTFSSEKDFTNVDWSSKGVELMMECTGKFVKVNNLEPYFEKCGIKQVVVSAPVKEEGALNVVLGCNHEKLSTETKLVTNASCTTNCLAPVVKVILENFGIKHGCITTIHDVTGTQSIVDMPNTKKTDLRRARSGMTNLCPTSTGSATAIIEIYPELKDKLNGLAVRVPLLNGSLTDCVFEVKRSVTKEEVNAALKAASESGPLKGILGYETKPLVSSDYTDDTRSSIIDALSTQVIDGTMVKIYAWYDNEAGYSKRMAELCNITAAMNITGTEPS 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4862.11989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4862.11989.1 >prot_H-paniculata_contig4862.11989.1 ID=prot_H-paniculata_contig4862.11989.1|Name=mRNA_H-paniculata_contig4862.11989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=363bp MVVKVAINGFGRIGRCLFRFLWEMSDVAEIVLVNEIVGGAETAGYLLKYDback to top mRNA from alignment at H-paniculata_contig4862:2442..13213+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4862.11989.1 ID=mRNA_H-paniculata_contig4862.11989.1|Name=mRNA_H-paniculata_contig4862.11989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10772bp|location=Sequence derived from alignment at H-paniculata_contig4862:2442..13213+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4862:2442..13213+ >mRNA_H-paniculata_contig4862.11989.1 ID=mRNA_H-paniculata_contig4862.11989.1|Name=mRNA_H-paniculata_contig4862.11989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2178bp|location=Sequence derived from alignment at H-paniculata_contig4862:2442..13213+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |