mRNA_H-paniculata_contig4857.11981.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4857.11981.1
Unique NamemRNA_H-paniculata_contig4857.11981.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: D7G466_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G466_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 1.570e-142
Identity = 224/343 (65.31%), Postives = 261/343 (76.09%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREAALVAPAASVGRGNFGGG---------------VSRSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGAGARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAASKSLGAMAAKYPGAEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            +V F +A  A  AID LQDTDL+GR I+LREDRE              FGGG                  ++NCKVFVSNLAY+V WQDLKDHM+ AG+V+RADVF+G DGRSKGLGTVEFS+P+EA+NAI QLS+T LMGR I VREERGD G HG   RGVGG AGA+VYVGNLSW   WQDLKD+MR AG+VKFVDLFQ+PGGRSKGCA+VEYETPQEAH+AIRDL+DT+L+GR++FVREDREEG   SK +G +   + GAEGRQ+ V N++W   WQ LKDHFKQ G VQFVEIPEDAQGRSKG+ TVRF SEQ A  AI++L+ TDL GRRI V+ED
Sbjct:  108 LVTFTSAAGASDAIDRLQDTDLMGRPIYLREDREEQ-----------GFGGGGXXXXXXXXXXXXXXXXXNANCKVFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGTVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHG---RGVGGAAGAKVYVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEGPIGSKRIGQL---HEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 433          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.760e-79
Identity = 165/357 (46.22%), Postives = 208/357 (58.26%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREAA--LVAPAASVGRGNFGGGVSRSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGA-------------GARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAASKSLGAM-----AAKYPGAEGR---------QIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            +VEF TA  AR A+  + DT+L GR IF+REDREAA  L AP A+ GR       + + + +V+V NL++EV WQDLKDHMRQAG+V  A+V  G DGRSKG G VE++   +A+ AI  L+DT L GR I VRE+R +VGG                            VYVGNL++   WQDLKD+MR AGNV   D+     GRSKGCAIV Y+ PQEA  AIR+L ++ L GR +FVREDRE+G               +A Y G   R         Q+FVGNL++   W+ LKDHFKQ G V  VE+ E   GR KG+GTV F   + A  AI  +N  +L GR + VK D
Sbjct:   49 LVEFATAEGARRAVLMMNDTELHGRQIFVREDREAAAALPAPGATGGRAV---DAAEAGSRRVYVGNLSWEVVWQDLKDHMRQAGDVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDR-EVGGXXXXXXXXXXXXXXXXXXXXXXXSNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQGGGRXXXXXXXXXXXRSAGYDGDYDRMPVDDGTATQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVD 401          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A7S3Q3W4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3W4_9STRA)

HSP 1 Score: 265 bits (678), Expect = 5.090e-77
Identity = 158/352 (44.89%), Postives = 208/352 (59.09%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREAALVA---------PAASVGRGNFGGGVSRSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGAGAR-VYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAAS--------------KSLGAMAAKYPGAEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            +VEF +A  A+ A+  L DTDL GR IF+REDRE+             PA++   GN         +C+V+V NL++EV WQDLKD+MR AG V+ ++V    DGRSKG G VE++ P EAKNA   LSDT L  R I VRE+R    G G+     GG  G+  VYVGNL++   WQDLKD+MR AGNV   ++ QQ  G SKGC IV Y+  +++  AIR+L ++ L GR +FVREDRE+G                  +  G    K P   G Q+FVGNL++  +W  LKDHF+Q G V+ VE+ E   GR KG GTVRF + + A  AI+ LN  +L GR + V+ D
Sbjct:  128 IVEFASAEGAQRAL-LLNDTDLAGRQIFVREDRESGNGGGYYTQQPGNPASATSGGNDAS--EEKQSCRVYVGNLSWEVAWQDLKDYMRSAGEVVYSEVMTNADGRSKGCGIVEYATPEEAKNACTTLSDTELKDRMIFVREDRETSSGGGNQ---QGGNRGSTSVYVGNLAYETSWQDLKDHMRAAGNVDQANVLQQEDGTSKGCGIVVYQNARDSSRAIRELQESVLHGRPIFVREDREQGGXXXXXXXXXXXXXXFXXRXRGGHQRK-PVTPGTQLFVGNLSFDTNWTELKDHFRQCGDVERVEVIEGHDGRKKGFGTVRFYNAKDAANAIERLNGVELQGRELQVRVD 472          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A7S1DBL6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBL6_CYCTE)

HSP 1 Score: 252 bits (643), Expect = 2.270e-73
Identity = 150/361 (41.55%), Postives = 199/361 (55.12%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREAALVAPAASVGRGNFGGGVS---RSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGA----------------------GARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAASKSLGAMAAKYPGA--------EGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            +VE+     A+ A+ TL DT+L GR IF+REDRE          G GN G   S   ++ + +V+V NL+++V WQDLKDHMR AG V+ A+V    +GRSKG G VE++ P EA+ AI  L+DT L GR + VRE+R    G      G  GGA                      G  VYV NL++   WQDLKD+ R AGNV    +   P GRS GC +V Y+ P+EA  AIR+L ++DL GR M++R+DR +                           G Q+FVGNL++   WQ LKDHF+Q G V+ VE+ E  +GR KG GTVRF S   A+ AI +LN  +L GR + V+ D
Sbjct:    8 IVEYSNEDGAKEAVLTLNDTELNGRQIFVREDREER--------GSGNSGNRFSSDDQAQSRRVYVGNLSWDVAWQDLKDHMRDAGEVVHAEVITEANGRSKGCGIVEYATPAEAQEAIKTLNDTELKGRMVFVREDRETNSG---TYHGAPGGAXXXXXXXXXXXXXXXXXXXXXXGTSVYVWNLAYDTSWQDLKDHCRAAGNVDQATILTNPEGRSLGCGVVVYQNPKEASRAIRELQNSDLNGRPMYLRKDRVQPGGGRXXXXXXXXXXXXXXXXXXXXXSGCQLFVGNLSFDTSWQDLKDHFRQCGEVEHVEVMETPEGRKKGFGTVRFGSAAEAEAAISQLNGVELQGRTLEVRLD 357          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: R1FPR2_EMIHU (RNA-binding protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FPR2_EMIHU)

HSP 1 Score: 250 bits (639), Expect = 5.860e-73
Identity = 139/287 (48.43%), Postives = 174/287 (60.63%), Query Frame = 2
Query:  563 NCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGND-GRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGAGARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPG-GRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAASKSLGAMAAKYPGAE------------GRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKEDTH 1381
            +C V+V NLAYEV WQDLKDH +QAG+V  ADV + N  GRSKG G V F  P +A+NAI  L DT L GR I VRE+R + G      RG G   G  VYVGNL++ V WQDLKD+ +Q G+V   D+  + G GRSKGC IV + +P++A  AI  L+DTDL GR +FVREDRE G+                             G Q++VGNL+W   WQ LKDHFKQ G V   E+ + A GRS+G GTV F+S   A RAI + N+++  GR I V+ DTH
Sbjct:   61 SCSVYVGNLAYEVSWQDLKDHCKQAGDVRHADVLLENGTGRSKGCGIVVFGTPRDAQNAIEMLHDTELKGRPIFVREDR-EAGAPQSSSRGGGTAPGCSVYVGNLAYEVSWQDLKDHCKQVGDVVRADVLLENGTGRSKGCGIVVFGSPKDAKTAIDTLHDTDLKGRAIFVREDREAGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCQVYVGNLSWDCKWQDLKDHFKQAGDVIRAEVKDGADGRSRGFGTVLFSSAMDAARAIQKFNESNFMGRPILVRPDTH 346          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 8.510e-73
Identity = 155/358 (43.30%), Postives = 201/358 (56.15%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREAA----------------LVAPAASVGRGNFGGGVSRSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGR--GVGGGAGAR-------VYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAASKSLGAMAAKYPG-----AEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            ++EF+TA  A+ A+ TL DT+L+GR IF+REDRE                              +  G    +  +V+V NL+++V  QDLKDHMR AG V+ A+V   +DGRSKG G VEF+   EA+ AI  L+DT L GR I VRE+R              V GG   R       VYVGNL++   WQDLKD+MR+AGNV   ++ Q   GRSKGC IV Y+ PQEA  AIR+L +T L GR +FVREDRE+GS                    A G Q++VGNL+W   W+ LKDHF+Q G V+  E+ E   G+S+G GTVRF  ++ A  AI  LN  +L GR + VK D
Sbjct:  157 IIEFETAEGAQRAVLTLNDTELMGRQIFVREDREEGSGXXXXXXXXXXXXXXXXXXXXXXXXXRYASGGDAQTR-RVYVGNLSWDVALQDLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDRETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRVAAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKID 513          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A7S2W0R0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W0R0_9STRA)

HSP 1 Score: 250 bits (639), Expect = 5.010e-71
Identity = 152/366 (41.53%), Postives = 205/366 (56.01%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREA--------------ALVAPAASVGRGNFGGGVSRSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDV--GGHGDLGRGVGGGAGARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREE-GSAASKSLGAMAAKYP---------------------GAEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            +VEF TA  A  A++TL DT+L GR IF+REDRE+              +  +P+AS    +       S   +V+V NL+++V WQDLKDHMRQAG V  A+V   +DGRSKG G VEF+   EAK+AI  L+D+ L GR I VRE+R     GG G+   G   G+   V+VGNLS+   WQDLKD+MRQAGNV   ++     GRSKGC IV+Y+  Q+A  A+R+L ++ L GR +F REDRE+ G+A S+  G                               G Q+FVGNL+    W+ LKDHF+Q G V+  E+ E   G+    GT+RF  E+ A  AI  L+  +  G  + V+ D
Sbjct:  142 IVEFATAEMAEKAVETLNDTELKGRAIFVREDRESNSSSGYYTQQTEGESAPSPSASPAEADSCASGGESQGRRVYVGNLSWDVAWQDLKDHMRQAGEVSFAEVMNESDGRSKGCGIVEFATAEEAKDAIETLTDSELKGRMIFVREDRESTSSGGGGNFQSGSKEGS-TSVFVGNLSYETSWQDLKDHMRQAGNVDEANVLSMDDGRSKGCGIVQYQRAQDADRAVRELQNSILQGRPIFCREDREQPGAAPSRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGGGSQLFVGNLSADTTWKDLKDHFRQCGDVERAEVVE---GKRSTFGTIRFFKEKDALDAISNLDGVEFQGHELEVRND 503          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A250X7C5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X7C5_9CHLO)

HSP 1 Score: 237 bits (605), Expect = 2.680e-66
Identity = 151/356 (42.42%), Postives = 192/356 (53.93%), Query Frame = 2
Query:  404 QTAGDARAAIDTLQDTDLLGRFIFLREDR--EAALVAPAASVGRGNFGGGVSRSSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGG-----------------HGDLG---------RGVGGGAGARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREE----GSAASKSLGAMAAKYPGAEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            QT   A  AI+ L DT+L GR +++R DR  +   V      GRG    G  R    + +V+NLA++ GWQDLKD  R+AG V+ ADV +   GRSKG G VEF    EA NAI +L++  L GR + VRE++   G                  H  L          RG G     R YVGNL+W   W+DLKD  R+AG V   D+     GRSKGC IVE+ET  EA  AI  L+D +L GR+M VREDREE    G A  +S G +          + +VGNLA+   WQ LKD FK  G V   ++  D  G SKG G V F +E  A RAI  LND++L GRR++V+ED
Sbjct:    9 QTTSQAARAINRLNDTNLGGRNMYVRMDRVGDTRDVRQLRQQGRGPASSGGGR----RCYVNNLAWQTGWQDLKDKFREAGRVVHADVMVDEKGRSKGWGMVEFETTQEALNAISKLNEAELHGRLLQVREDKEHRGAPPVRAVANSAARMRSEVHPSLASGRPSHSSVRGTGDSR-CRCYVGNLAWQTGWKDLKDVFREAGRVVHADVMLDETGRSKGCGIVEFETEDEARMAIARLHDRELHGRLMHVREDREEVSRTGIAKLRSGGQVL------RAGRCYVGNLAYTTTWQVLKDKFKTAGRVLHADVVSDETGCSKGFGLVEFETEDEAARAIAMLNDSELDGRRMYVRED 353          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A448YVD1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVD1_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.750e-65
Identity = 156/368 (42.39%), Postives = 208/368 (56.52%), Query Frame = 2
Query:  392 VVEFQTAGDARAAIDTLQDTDLLGRFIFLREDREAAL----------VAPAASVGR-GN----FGG---------GVSR---SSNCKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLG-RGVGGGAGA-------RVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQ-QPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDREEGSAASKSLGAMAA----KYPGAEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            +VEF T   A  A+ TL DT+L GR IF+REDRE A            + + + GR GN    +GG         GVS    S + +V+V NL+++V W DLKDHM+QAG V+RADV   ++GRSKG G VEF     A+NAI  L+ + L+GR+I VRE+R   G     G R    G GA        VYV NLS+ V WQDLKD+MR+AGNV    +     G  S GC IV Y++ ++A  AIR+L ++DL GR + +RED+  G     + G  +     + P     Q++VGNL++   W+ LK+HF Q G V   ++     GRSKG G VRFAS + AQ AI  L  T+L GR I V+ D
Sbjct:  107 IVEFATPEGAAEAVLTLNDTELSGRRIFVREDREQASGRETGHNNYPYSSSRAGGRYGNPRSRYGGPAIHHGNHQGVSSDPGSQSRRVYVGNLSWDVAWADLKDHMKQAGEVVRADVICEHNGRSKGCGIVEFETEEGARNAIATLTHSELLGRTIFVREDREGSGSEAKGGQRPKRNGPGAFHQSSNKSVYVWNLSYDVSWQDLKDHMRRAGNVDQATILTGSDGSTSIGCGIVVYQSARDAARAIRELQESDLKGRPVRLREDKIAGRGPRPARGPRSGSDEPRAPPGVVTQLYVGNLSYDTTWRELKEHFLQAGEVVRADVKASDSGRSKGFGIVRFASPEDAQNAIATLAGTELDGRPIEVRPD 474          
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Match: A0A3M6VM60_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM60_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.330e-65
Identity = 128/271 (47.23%), Postives = 168/271 (61.99%), Query Frame = 2
Query:  566 CKVFVSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEAKNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGAGARVYVGNLSWAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIRDLNDTDLMGRMMFVREDRE-EGSAASKSLGAMAAKYPGAEGRQIFVGNLAWGVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDELNDTDLGGRRIFVKED 1375
            C+V+V NL++    QDL+DHM+ AG V  A V   N GRSKG G V +     A+NAI  L+DT L GR I VRE+R          +     +G RVYVGNLSW V WQDLKD+M+ AG V   D+ ++P GRSKGC +VEY + +EA  AI +LN T+L GR++FVREDRE EG + SK     AA     EGRQ++VGNL W  + Q LKD F+ VG V+  +I E   GRS+G G +R+ +   A +AI+ LN  ++  R I V+ D
Sbjct:   63 CRVYVGNLSWSTKCQDLQDHMQAAGPVALATVLEWN-GRSKGCGVVTYETEEAAQNAIATLNDTELGGRKIFVREDRESQSSSAAKPK-----SGFRVYVGNLSWNVKWQDLKDHMKNAGTVVHADVLEEPNGRSKGCGLVEYASQEEAAKAIAELNGTELEGRVIFVREDREPEGGSISKFAKRAAAPRGVGEGRQLYVGNLPWDTNSQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADASQAIERLNGLEVESRLIEVRLD 327          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4857.11981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G466_ECTSI1.570e-14265.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1BM28_9STRA1.760e-7946.22Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3Q3W4_9STRA5.090e-7744.89Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1DBL6_CYCTE2.270e-7341.55Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
R1FPR2_EMIHU5.860e-7348.43RNA-binding protein n=1 Tax=Emiliania huxleyi TaxI... [more]
A0A7S4IUY5_9STRA8.510e-7343.30Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2W0R0_9STRA5.010e-7141.53Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A250X7C5_9CHLO2.680e-6642.42Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A448YVD1_9STRA1.750e-6542.39Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A3M6VM60_9STRA2.330e-6547.23Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4857contigH-paniculata_contig4857:280..3886 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score431.0
Seed ortholog evalue6.3e-118
Seed eggNOG ortholog2880.D7G466
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-02_001450.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2267
Cds size1257
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4857.11981.1prot_H-paniculata_contig4857.11981.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4857 1163..3759 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930437.3409822-UTR-H-paniculata_contig4857:279..11621622930437.3409822-UTR-H-paniculata_contig4857:279..1162Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4857 280..1162 -
1691481291.9936574-UTR-H-paniculata_contig4857:279..11621691481291.9936574-UTR-H-paniculata_contig4857:279..1162Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4857 280..1162 -
1622930437.459951-UTR-H-paniculata_contig4857:3759..38861622930437.459951-UTR-H-paniculata_contig4857:3759..3886Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4857 3760..3886 -
1691481292.0592513-UTR-H-paniculata_contig4857:3759..38861691481292.0592513-UTR-H-paniculata_contig4857:3759..3886Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4857 3760..3886 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930437.3588707-CDS-H-paniculata_contig4857:1162..14591622930437.3588707-CDS-H-paniculata_contig4857:1162..1459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 1163..1459 -
1691481292.005119-CDS-H-paniculata_contig4857:1162..14591691481292.005119-CDS-H-paniculata_contig4857:1162..1459Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 1163..1459 -
1622930437.3725863-CDS-H-paniculata_contig4857:1571..17391622930437.3725863-CDS-H-paniculata_contig4857:1571..1739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 1572..1739 -
1691481292.0140846-CDS-H-paniculata_contig4857:1571..17391691481292.0140846-CDS-H-paniculata_contig4857:1571..1739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 1572..1739 -
1622930437.3872154-CDS-H-paniculata_contig4857:1965..21601622930437.3872154-CDS-H-paniculata_contig4857:1965..2160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 1966..2160 -
1691481292.0250385-CDS-H-paniculata_contig4857:1965..21601691481292.0250385-CDS-H-paniculata_contig4857:1965..2160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 1966..2160 -
1622930437.4004104-CDS-H-paniculata_contig4857:2464..26171622930437.4004104-CDS-H-paniculata_contig4857:2464..2617Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 2465..2617 -
1691481292.0329726-CDS-H-paniculata_contig4857:2464..26171691481292.0329726-CDS-H-paniculata_contig4857:2464..2617Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 2465..2617 -
1622930437.4132342-CDS-H-paniculata_contig4857:3022..32031622930437.4132342-CDS-H-paniculata_contig4857:3022..3203Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 3023..3203 -
1691481292.0406768-CDS-H-paniculata_contig4857:3022..32031691481292.0406768-CDS-H-paniculata_contig4857:3022..3203Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 3023..3203 -
1622930437.433507-CDS-H-paniculata_contig4857:3496..37591622930437.433507-CDS-H-paniculata_contig4857:3496..3759Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 3497..3759 -
1691481292.0484636-CDS-H-paniculata_contig4857:3496..37591691481292.0484636-CDS-H-paniculata_contig4857:3496..3759Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4857 3497..3759 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4857.11981.1

>prot_H-paniculata_contig4857.11981.1 ID=prot_H-paniculata_contig4857.11981.1|Name=mRNA_H-paniculata_contig4857.11981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp
MFMMKCDGQFPGATWATGGPDYVNRDDAAFNEIHVLGRSCVTRRLATTTE
AHNMLGAGGSSHCFPSMGRITNDGIGCWALSKLSIRGSVVEFQTAGDARA
AIDTLQDTDLLGRFIFLREDREAALVAPAASVGRGNFGGGVSRSSNCKVF
VSNLAYEVGWQDLKDHMRQAGNVLRADVFMGNDGRSKGLGTVEFSRPFEA
KNAIHQLSDTILMGRSINVREERGDVGGHGDLGRGVGGGAGARVYVGNLS
WAVVWQDLKDYMRQAGNVKFVDLFQQPGGRSKGCAIVEYETPQEAHAAIR
DLNDTDLMGRMMFVREDREEGSAASKSLGAMAAKYPGAEGRQIFVGNLAW
GVDWQHLKDHFKQVGHVQFVEIPEDAQGRSKGHGTVRFASEQGAQRAIDE
LNDTDLGGRRIFVKEDTH*
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mRNA from alignment at H-paniculata_contig4857:280..3886-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4857.11981.1 ID=mRNA_H-paniculata_contig4857.11981.1|Name=mRNA_H-paniculata_contig4857.11981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3607bp|location=Sequence derived from alignment at H-paniculata_contig4857:280..3886- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGAGTTGAGGTGGCAAGATAACTGTCGTTTTCATGGGTCTAGGGCTGTA GAGCTCTATGTTGCTGTGGATGAGGGCATCTGTGGATTGAAAGGATGGTG GATGGATGACGGTTTTGAATTATTGGGATGTTCATGATGAAGTGCGATGG TCAATTTCCGGGTGCGACCTGGGCGACGGGTGGACCTGACTATGTCAACC GCGATGATGCAGCGTTCAATGAGATTCACGTCTTGGGAAGATCATGCGTC ACCAGGAGACTTGCCACAACAACTGAAGCTCATAACATGCTGGGCGCAGG TGGCTCATCTCATTGTTTTCCTTCCATGGGAAGGATAACGAACGATGGGA TCGGTTGTTGGGCACTAAGCAAGCTCAGTATCCGCGGGAGGTAACCATGG GCTAGGGATCTTTCGATACCAATGTCATGGAAGGAGATATGGCCCTTTCC GTGTATAACAGATAGCCTGTAGGCTGCAGGCACTCGGGCCCTGCATCATC TAGAGCTACGTTTCTTAGACTTCTTTGTCAGGCACGTGTGATTCGCGCAC CGCCGTGCGCTCGTGTCACGATCAGGCGGTCGTGAGTCCTGCGTTCGATT GCAACTAACGAATCACGTAACCGCGGGTTCCCTCCCCCCTCTCCGCCTAC ACCAATACATTGTGTTGACTTGCGACACGACAGCGTGGTGGAATTCCAAA CAGCAGGCGATGCTCGCGCTGCGATCGACACTCTTCAGGACACCGACTTA TTGGGACGTTTCATTTTTTTGAGGGAGGATCGTGAGGCTGCTCTGGTAGC TCCGGCGGCTAGTGTAGGGCGTGGCAACTTTGGCGGAGGAGTGTCAAGGA GCTCCAACTGCAAGGTATGTGTAATATTTCATATTTTTTTCCCATCTTTG CAGCTAAAGCCGGGCGCACGATCACCGCCTTTGAGCTGTTGAACGAGGTC GTCAGCTTATAGAATATCAGTGTAAAGTTTTCTATGCGGCATCTGGGCGC TGGAAGAGCATCCCCGAGCATGGCAACTTGTAGCTGGTACCCTGGGTCCG AAATTGGTCATGCTACGTGACGAATTTTTTGGGAAAACTCCAAAACTTTG TTAGAGCAAATAGGTTTTCGTTTCACCCACTCCTTCTTACAGGGAATGAC TGCGCGTCGCTCTGTTTGCTTTGATTTGGCTTTCGAAAACAGGCGATCCA ATTTAGACTAGTAATTTCCTCGAACGGTATGTTTTTCTGCATTACTAATT TTTTCCCACGTCTCCAAAGGTGTTCGTGAGCAATCTCGCCTACGAAGTTG GCTGGCAAGATTTGAAGGACCACATGCGGCAAGCCGGCAATGTGCTGCGC GCCGATGTGTTCATGGGCAATGACGGTCGATCCAAGGGCCTGGGCACGGT GGAGTTCTCTAGGCCCTTCGAGGTACGAAGTGTCGTGTTCAGTTATTCGC TTTTTAATTATATATTTTGGTGTTGCTGGCGTTCTTATTGAAAGTAGGAC TAACTACCCCCATGCTGTGAAGGTGAGCAGGTGTACGGCCTCTCCAGCTT ATAAAAATATGAGTTACTGTTAGGTTGACACGGTGAACGCCTGTCTGTTG CATGCACGGGGTCGATGACGTCGCCATAAAAAACATTGTCTAGTAGGCAT GGCCGTACACGTCGGCGTGTGCACTGCTTCACTGACGCAAGGTCGTGCAT TTTGTTGTCTACACGTTCGTATTTAGGCGAAAAATGCCATACACCAGCTA AGTGACACCATTCTGATGGGTCGCTCCATCAATGTCCGGGAGGAGCGCGG TGATGTGGGAGGACACGGTGACCTTGGAAGGGGCGTCGGGGGCGGGGCCG GTGCTAGGGTCTACGTGGGTAACCTGAGCTGGGCTGTCGTCTGGCAGGAT TTGAAGGACTACATGCGACAGGTCTGAGTATTGGTTCGAGTGACCCTTTT GATTTGTCGTGAATAGATAAGTTTACGAAAGGGCTCTTTCGATTCACTTT GTCGTTGCTTTATTGCCGATGTGCTACCCCGTGTCTTACATTTGGAGCAA GGTTACGTTTCCAAATGGTGATGTGTAATTTTCCCTGTTCAGCTCGTCAC GATGTCCACGATATCATAGCCGCGCTCACTCCGTTCAATATTCGCAGGCT GGCAATGTCAAGTTTGTGGACCTATTCCAGCAACCGGGAGGGCGCTCCAA GGGTTGTGCTATTGTCGAGTATGAGACCCCCCAGGAAGCTCACGCGGCAA TCCGAGATCTCAACGACACAGATCTAATGGGACGGATGATGTTTGTGAGA GAAGACCGCGAGGAGGTAGGTTCAGAAGAGCAGTAAAGTATCCGTTGGCT TCGGGGTTAAGTCCTTTCGAACACGCCGCACATTATGTATACACGATTTG CCTCACCTCGGGTATCATTGGTCGCAGGGCTCGGCTGCGAGTAAGAGCTT GGGGGCGATGGCAGCCAAGTACCCAGGAGCGGAAGGAAGGCAGATTTTCG TGGGAAATTTGGCGTGGGGTGTCGATTGGCAACACCTGAAGGACCACTTC AAACAGGTCGGGCATGTTCAATTCGTCGAGATTCCAGAGGATGCCCAGGG CCGCTCCAAGGGGCACGGTACAGTGCGCTTTGCCTCGGAGCAGGGAGCAC AGCGTGCAATTGATGAGCTCAATGACACGGACCTTGGTGGTCGTCGTATT TTCGTCAAGGAAGATACGCATTGAGGGTCACTTCAACTGAGATCCTCTAC GCGAGCGGGGTTCCGCTGGACTTAGCATTTAGGGCAAATGCGAGAACTGA GGATGGTAGTGCAGTTGTAGTGCTGACTGTGAGACACAGCCCACATCGGT TTCTTGAGCTACCATCATCTTGAAGATGCCAAAGACAGTGCGTAGTCAAA CGTTTGTGTTTGCAGCGTCCGTTTCTTCACATGACACTTGCAAAGCATGG GAGGAGATCGACAAGTGGCACAGAAACGCAATTGGTGGTATCACGGTGTA TTGCCTTTCGTGGATAGGGGAAAATTAGCTCGTATATGATGTCTTGGATA CGAATGTAATCCAATCGTAGATGAAATGCTTGTATGCTTGAAGTAATTGG GCTCTGCAATTAGGGATATCACGTGTAAATGTCAAGAGCAACCTGTCTGT GTGGCGTAGCGTGTTTCGGTGAGCACGTAGACATGTACAAACAATACACC GAACACCAAACCTGGTATGATACTAGGGTGCTGTGCTCCCGTTTCTCCCA TTTACTGGATAATTTTCCTCCGAAATGTCGAGATATGCCCAACTCAATCC AGTCTTACCCCCAGGTAAATAGAAACGCACTGCCAGCACAAGCAGGCGCT AAATAAAAATGCATCTTGACCAACAAAGTCGATGGATTAACGGGAGAGAG GACGGTACACACACTGAGTGAGCGCTTGTGAAGAAGAGCGCGACAGCACC TCAACCCTGCACAACACGAGAGAGCGACTAATCAAAATGGATCGTGGGGA TAGGAGCGTGAGAAGCGGACGTCAACCATGATGAATACTTGCTGTTCGTA CAGGCACCGGAACAAGACTAATGGGTAGGTCAGGGTAGAAGTTGTCCAGA AACCCGC
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Coding sequence (CDS) from alignment at H-paniculata_contig4857:280..3886-

>mRNA_H-paniculata_contig4857.11981.1 ID=mRNA_H-paniculata_contig4857.11981.1|Name=mRNA_H-paniculata_contig4857.11981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2514bp|location=Sequence derived from alignment at H-paniculata_contig4857:280..3886- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCATGATGAAGTGCGATGGTCAATTTCCGGGTGCGACCTGGGCGAC
GGGTGGACCTGACTATGTCAACCGCGATGATGCAGCGTTCAATGAGATTC
ACGTCTTGGGAAGATCATGCGTCACCAGGAGACTTGCCACAACAACTGAA
GCTCATAACATGCTGGGCGCAGGTGGCTCATCTCATTGTTTTCCTTCCAT
GGGAAGGATAACGAACGATGGGATCGGTTGTTGGGCACTAAGCAAGCTCA
GTATCCGCGGGAGATGTTCATGATGAAGTGCGATGGTCAATTTCCGGGTG
CGACCTGGGCGACGGGTGGACCTGACTATGTCAACCGCGATGATGCAGCG
TTCAATGAGATTCACGTCTTGGGAAGATCATGCGTCACCAGGAGACTTGC
CACAACAACTGAAGCTCATAACATGCTGGGCGCAGGTGGCTCATCTCATT
GTTTTCCTTCCATGGGAAGGATAACGAACGATGGGATCGGTTGTTGGGCA
CTAAGCAAGCTCAGTATCCGCGGGAGCGTGGTGGAATTCCAAACAGCAGG
CGATGCTCGCGCTGCGATCGACACTCTTCAGGACACCGACTTATTGGGAC
GTTTCATTTTTTTGAGGGAGGATCGTGAGGCTGCTCTGGTAGCTCCGGCG
GCTAGTGTAGGGCGTGGCAACTTTGGCGGAGGAGTGTCAAGGAGCTCCAA
CTGCAAGCGTGGTGGAATTCCAAACAGCAGGCGATGCTCGCGCTGCGATC
GACACTCTTCAGGACACCGACTTATTGGGACGTTTCATTTTTTTGAGGGA
GGATCGTGAGGCTGCTCTGGTAGCTCCGGCGGCTAGTGTAGGGCGTGGCA
ACTTTGGCGGAGGAGTGTCAAGGAGCTCCAACTGCAAGGTGTTCGTGAGC
AATCTCGCCTACGAAGTTGGCTGGCAAGATTTGAAGGACCACATGCGGCA
AGCCGGCAATGTGCTGCGCGCCGATGTGTTCATGGGCAATGACGGTCGAT
CCAAGGGCCTGGGCACGGTGGAGTTCTCTAGGCCCTTCGAGGTGTTCGTG
AGCAATCTCGCCTACGAAGTTGGCTGGCAAGATTTGAAGGACCACATGCG
GCAAGCCGGCAATGTGCTGCGCGCCGATGTGTTCATGGGCAATGACGGTC
GATCCAAGGGCCTGGGCACGGTGGAGTTCTCTAGGCCCTTCGAGGCGAAA
AATGCCATACACCAGCTAAGTGACACCATTCTGATGGGTCGCTCCATCAA
TGTCCGGGAGGAGCGCGGTGATGTGGGAGGACACGGTGACCTTGGAAGGG
GCGTCGGGGGCGGGGCCGGTGCTAGGGTCTACGTGGGTAACCTGAGCTGG
GCTGTCGTCTGGCAGGATTTGAAGGACTACATGCGACAGGCGAAAAATGC
CATACACCAGCTAAGTGACACCATTCTGATGGGTCGCTCCATCAATGTCC
GGGAGGAGCGCGGTGATGTGGGAGGACACGGTGACCTTGGAAGGGGCGTC
GGGGGCGGGGCCGGTGCTAGGGTCTACGTGGGTAACCTGAGCTGGGCTGT
CGTCTGGCAGGATTTGAAGGACTACATGCGACAGGCTGGCAATGTCAAGT
TTGTGGACCTATTCCAGCAACCGGGAGGGCGCTCCAAGGGTTGTGCTATT
GTCGAGTATGAGACCCCCCAGGAAGCTCACGCGGCAATCCGAGATCTCAA
CGACACAGATCTAATGGGACGGATGATGTTTGTGAGAGAAGACCGCGAGG
AGGCTGGCAATGTCAAGTTTGTGGACCTATTCCAGCAACCGGGAGGGCGC
TCCAAGGGTTGTGCTATTGTCGAGTATGAGACCCCCCAGGAAGCTCACGC
GGCAATCCGAGATCTCAACGACACAGATCTAATGGGACGGATGATGTTTG
TGAGAGAAGACCGCGAGGAGGGCTCGGCTGCGAGTAAGAGCTTGGGGGCG
ATGGCAGCCAAGTACCCAGGAGCGGAAGGAAGGCAGATTTTCGTGGGAAA
TTTGGCGTGGGGTGTCGATTGGCAACACCTGAAGGACCACTTCAAACAGG
TCGGGCATGTTCAATTCGTCGAGATTCCAGAGGATGCCCAGGGCCGCTCC
AAGGGGCACGGTACAGTGCGCTTTGCCTCGGAGCAGGGAGCACAGCGTGC
AATTGATGAGCTCAATGACACGGACCTTGGTGGTCGTCGTATTTTCGTCA
AGGAAGATACGCATTGAGGCTCGGCTGCGAGTAAGAGCTTGGGGGCGATG
GCAGCCAAGTACCCAGGAGCGGAAGGAAGGCAGATTTTCGTGGGAAATTT
GGCGTGGGGTGTCGATTGGCAACACCTGAAGGACCACTTCAAACAGGTCG
GGCATGTTCAATTCGTCGAGATTCCAGAGGATGCCCAGGGCCGCTCCAAG
GGGCACGGTACAGTGCGCTTTGCCTCGGAGCAGGGAGCACAGCGTGCAAT
TGATGAGCTCAATGACACGGACCTTGGTGGTCGTCGTATTTTCGTCAAGG
AAGATACGCATTGA
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