prot_H-paniculata_contig4853.11973.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4853.11973.1
Unique Nameprot_H-paniculata_contig4853.11973.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length441
Homology
BLAST of mRNA_H-paniculata_contig4853.11973.1 vs. uniprot
Match: D7FM50_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM50_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.760e-37
Identity = 177/461 (38.39%), Postives = 211/461 (45.77%), Query Frame = 0
Query:    8 FSVGVDADPMMVEQAIGKSLDEIIKERRKDLKGAKSTVAKSRAA---KVAKSVGTGKAKRDAALAQKRGIATSGKADTAKVDAEVRRSKNQQSKKNARXXXXXXXXXXXXXXXXXXXXXXXK-------ASATIPAETPKDKRGGARPGGKXXXXXXXXPKQAAQSIKPKSGGGPDGGFQIGVKGTGNKQQQQALAGKGRKRGRKVATVAGG-----------GQAIVTTPVRLGFPGANATKSKSKKKNKGESSTIPFVPDQNLRISFTNHSPATANXXXXXXXXKFKGQQNHAGGGPLAP------TYIFGSPANNTSSRYTKHQKQRPSLSSXXXXXXXXXTPTSFLSPTFHPQPKASFNNGLANNRLANXGLASARSGXXXXXXXXXXXXPVRTVV-GVEGVVXXXXXXXXSRAWKNGRAGPKDVRRAKQGNADRVVNAGKKARAGTLDAKRSNKQV 440
            FSVGVDADPMMVEQ I K+L+EII ERRK++K   +T +K  AA   KVAKSVGT KAKRDAAL++KRGI+ S K   AK++AEV+R+K QQSKK AR                     XX        +  +  A + + KRGGARPGGK  XXXXXX  QAAQ+IK K       GF IGVKGT  K                                   QA+V        P AN              +  PF PD N++ISF                        H+GG            ++FGSP  N                 XXXXXXXXX PTSFLSPTF+P P+   NNGL             R              P R +  G  G V               RAGPKDVRR++    DRVV A +KARAGTLDA+R+ +Q 
Sbjct:    6 FSVGVDADPMMVEQTIDKTLEEIINERRKEVKATPTTKSKKAAAAKQKVAKSVGTSKAKRDAALSKKRGISASAKPSPAKIEAEVQRTKTQQSKKKARQNADVLVASTRGVSKAKAKKAXXXXXXXXXASKKSTAAGSARSKRGGARPGGKKQXXXXXXXXQAAQNIKSK-------GFNIGVKGTSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQAVVA-------PKANMRXXXXXXXXXXXXANAPFKPDHNMQISF------------------------HSGGSXXXXXXVTQGAFVFGSP--NGXXXXXXXXXXXXXXXXXXXXXXXXXXPTSFLSPTFNPAPQP-INNGL-------------RGSGGVKKATYTPPAPTRRIFSGGVGDVR--------------RAGPKDVRRSQGNPVDRVVRATRKARAGTLDARRNGRQA 398          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4853.11973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM50_ECTSI1.760e-3738.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4853contigH-paniculata_contig4853:4316..10991 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4853.11973.1mRNA_H-paniculata_contig4853.11973.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4853 4316..11027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4853.11973.1 ID=prot_H-paniculata_contig4853.11973.1|Name=mRNA_H-paniculata_contig4853.11973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=441bp
MVAPVGTFSVGVDADPMMVEQAIGKSLDEIIKERRKDLKGAKSTVAKSRA
AKVAKSVGTGKAKRDAALAQKRGIATSGKADTAKVDAEVRRSKNQQSKKN
ARAEAAVAVAKSKGASKAKAKAKAKKASATIPAETPKDKRGGARPGGKKK
GSGPGGPKQAAQSIKPKSGGGPDGGFQIGVKGTGNKQQQQALAGKGRKRG
RKVATVAGGGQAIVTTPVRLGFPGANATKSKSKKKNKGESSTIPFVPDQN
LRISFTNHSPATANNNHNNNSNKFKGQQNHAGGGPLAPTYIFGSPANNTS
SRYTKHQKQRPSLSSSTRGGGGGGTPTSFLSPTFHPQPKASFNNGLANNR
LANNGLASARSGGGGGGGGGTSAAPVRTVVGVEGVVGGGGGGGGSRAWKN
GRAGPKDVRRAKQGNADRVVNAGKKARAGTLDAKRSNKQVS
back to top