prot_H-paniculata_contig48519.11970.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48519.11970.1
Unique Nameprot_H-paniculata_contig48519.11970.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA)

HSP 1 Score: 103 bits (256), Expect = 1.060e-22
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISA----PELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            MKD+G+ SR+LGI+++ DR  G + +SQ SY+ +V+KR+   E + V TP+ G  K+SA     E  D    P S       VGS+ YA  GTRPDIAYAI   +R M  P    +   K +LRY+    DL + F  K+ +  ++ + D+D
Sbjct: 1063 MKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSAVKEVSECIDTEKYPYS-----SAVGSVMYAMIGTRPDIAYAIGLISRFMSKPGIMHWEAVKWLLRYIRGTADLNLVFT-KNKNFSVQGYCDSD 1208          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A6D2J1R0_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J1R0_9BRAS)

HSP 1 Score: 101 bits (252), Expect = 3.650e-22
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISA----PELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            MKDLG+ SR+LGI+++ DR  G + +SQ  Y+ +V+KR+   E + V TP+ G  K+SA     E  D    P S       VGSL YA  GTRPD+AYAI   +R M  P    +   K +LRY+    DL + F  ++ D  ++ + D+D
Sbjct: 1068 MKDLGAASRILGIDIKRDRKEGVLWLSQSGYLGKVIKRFNMVEAKTVNTPMGGHFKLSAVSDASECVDTEKVPYS-----SAVGSLMYAMVGTRPDLAYAIGLVSRFMSKPGSIHWEAVKWLLRYVKRSSDLSLVF-RRNKDFRVQGYCDSD 1213          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A284S2Y9_ARMOS (Uncharacterized protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284S2Y9_ARMOS)

HSP 1 Score: 100 bits (250), Expect = 6.800e-22
Identity = 50/147 (34.01%), Postives = 90/147 (61.22%), Query Frame = 0
Query:    4 LGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVV--LGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            LG L+ +LG+EV+ DR N T++ISQ +YI  +L+++G  +C+ V  P++   +IS  +  + PS+      V    ++G L +  T TRPD+A+ +   +R +++P R  ++  KR+L+YL   + LG+T+   ++  GL+ + DAD
Sbjct: 1140 LGPLNWLLGMEVKRDRKNHTLSISQTTYIDSLLRKFGMTDCKSVSVPLDPMTQISREQCPNTPSDVADMRDVPYRELIGGLIWLSTATRPDLAFTVCVLSRFLDNPGRPHWNAAKRVLQYLKGTRTLGLTYGRSNETRGLDIYTDAD 1286          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 99.0 bits (245), Expect = 3.200e-21
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITF 132
            +KDLG   +++GIE++ DR NGTI++SQ  YI  VL R+G    R V TP++  V I      D  ++P   G    ++GSL YA  GTRPDI++A+ +  +   +P  E ++  KR+ RYL+  ++L + F
Sbjct: 1100 VKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVF 1230          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A8H7KIG6_AGABI (Integrase catalytic domain-containing protein n=2 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7KIG6_AGABI)

HSP 1 Score: 98.6 bits (244), Expect = 4.360e-21
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVVLGM--------VGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            DLG +  +LGIE+R DR  G + +SQ SYI   L+RYGF++ + V  P++  +  S  +       PKS   +  M        VGSL YA   TRPDIA+AI   ++  ++P  + +   KR+ RYL   ++L +TF G+ D   LE F DAD
Sbjct: 1107 DLGEIHWLLGIEIRRDRNEGKLYMSQRSYIDSCLRRYGFEDAKPVSIPMDPSIHYSTNQ------SPKSTAEIARMARIPYQEAVGSLMYAAIATRPDIAFAIQVLSKFSKNPGIDHWEAVKRVFRYLKGTKELWLTFGGQGDT--LEGFADAD 1252          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: UPI001652D85A (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652D85A)

HSP 1 Score: 95.5 bits (236), Expect = 2.020e-20
Identity = 59/150 (39.33%), Postives = 84/150 (56.00%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPE--LADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            MKDLGSLS  LGI+V    P   + +SQ +Y ++++ R G D C+ + TPV+ + K+SA    L D P+  +S      + G+L Y  T TRPDI+YA+ Q    M  P    ++  KRILRY+    DLG+  D  +D   L  + DAD
Sbjct:   93 MKDLGSLSYFLGIQVTW--PENHMFLSQTAYAKDIIHRAGMDSCKPIATPVDTQSKLSAHSGTLHDDPTTYRS------LAGALQYL-TFTRPDISYAVQQICMHMNSPTTAHWNALKRILRYIHGTIDLGLHLDA-TDTSSLRAYTDAD 232          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A7M5XDS1_9CNID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XDS1_9CNID)

HSP 1 Score: 92.0 bits (227), Expect = 2.760e-20
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYL 122
            M D G ++ +LG+ VR DR  G I I Q +Y+R VL+R+G DECR + TP+E           +KP   KS       +GSL YA  GTRPD++Y++   ++ M  P  E +   KR+ RY+
Sbjct:   84 MVDQGEINYILGMRVRRDRQAGIIRIDQSAYLRNVLQRFGMDECRPISTPMETGKSFEKLAPDEKPVNLKS---YQAAIGSLIYASIGTRPDLSYSVGVLSQYMSHPSEEHWKGVKRVFRYI 202          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A6A2WFH0_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WFH0_HIBSY)

HSP 1 Score: 95.9 bits (237), Expect = 3.780e-20
Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            +KDLGSLS  LGIEVR D  N  +  +Q  YIRE+L ++GFD+ + +PTP+    K+S    A  P E  +      +VG+L Y    TRPDI +A+++  + M+ P    F   KRILRYL    D G+ F   S    L  F DAD
Sbjct:  988 LKDLGSLSFFLGIEVRSD--NSGLIFTQQKYIRELLHKHGFDDVKSLPTPMVSNCKLSID--ASDPIEDAAQ--YRSIVGALQYIVV-TRPDIVFAVNKVCQFMQSPRNSHFQAVKRILRYLQGTADYGLRFRASSR-MSLTGFADAD 1127          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: A0A224X581_9HEMI (Putative polyprotein (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X581_9HEMI)

HSP 1 Score: 95.9 bits (237), Expect = 3.800e-20
Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            +KDL      LGIE    R NG I + Q  YI+++L R+G +EC  V TP+E + K++ P      S+ K P     +VG+LTY    TRPDIAYA+    +   D  R  +   KR+LRYL    +LGIT++ ++    +  +VDAD
Sbjct: 1040 IKDLAEAGCCLGIEFL--RKNGKIGLFQHGYIKDLLSRFGMEECNAVCTPMEPRTKLTKPATPPSDSDKKLP--FRELVGALTYLAVTTRPDIAYAVSCLGQFNNDYDRTHWIAAKRVLRYLKGTMNLGITYEREA--KPIRGYVDAD 1181          
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Match: D1MBJ6_AGABI (Polyprotein n=1 Tax=Agaricus bisporus var. bisporus TaxID=192523 RepID=D1MBJ6_AGABI)

HSP 1 Score: 95.9 bits (237), Expect = 3.810e-20
Identity = 54/148 (36.49%), Postives = 85/148 (57.43%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPELADKPSEPKSPGVV--LGMVGSLTYAWTGTRPDIAYAIHQAARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD 148
            DLG +  +LGIE+R +R  G + +SQ SYI   L+RYGF++ + V  P++  + +S  +  +  +E      +     VGSL YA   TRPDIA+AI   ++  ++P  + +   KR+ RYL   ++L +TF G+ D   L+ F DAD
Sbjct: 1109 DLGEIHWLLGIEIRRNREEGKLYMSQRSYIDSCLRRYGFEDAKPVSIPMDPSIHLSTNQSPNSTTEIARMARIPYQEAVGSLMYAAIATRPDIAFAIQVLSKFSKNPGEKHWEAVKRVFRYLKGTRELWLTFGGQDDT--LKGFADAD 1254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48519.11970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J3F7G4_NOCCA1.060e-2238.82Retrovirus-related Pol polyprotein from transposon... [more]
A0A6D2J1R0_9BRAS3.650e-2238.82Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]
A0A284S2Y9_ARMOS6.800e-2234.01Uncharacterized protein n=2 Tax=Armillaria ostoyae... [more]
A0A284QR88_ARMOS3.200e-2138.64Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A8H7KIG6_AGABI4.360e-2138.31Integrase catalytic domain-containing protein n=2 ... [more]
UPI001652D85A2.020e-2039.33uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A7M5XDS1_9CNID2.760e-2039.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A2WFH0_HIBSY3.780e-2041.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A224X581_9HEMI3.800e-2038.51Putative polyprotein (Fragment) n=1 Tax=Panstrongy... [more]
D1MBJ6_AGABI3.810e-2036.49Polyprotein n=1 Tax=Agaricus bisporus var. bisporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 1..133
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48519contigH-paniculata_contig48519:481..990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48519.11970.1mRNA_H-paniculata_contig48519.11970.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48519 295..1227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48519.11970.1 ID=prot_H-paniculata_contig48519.11970.1|Name=mRNA_H-paniculata_contig48519.11970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MKDLGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTP
VEGKVKISAPELADKPSEPKSPGVVLGMVGSLTYAWTGTRPDIAYAIHQA
ARRMEDPCREDFSTCKRILRYLSTVQDLGITFDGKSDDHGLEEFVDAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like