mRNA_H-paniculata_contig11866.1197.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: D8LTL7_ECTSI (Heavy metal translocating P-type ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL7_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 3.950e-18 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 1 Query: 1 MSKPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 M+KPTLTDV++ G N +DSVLA AA+AEA SEHP+G AIV+A+RARG+S+ AV GFQ+TPGMG+S Sbjct: 975 MNKPTLTDVLSQGAANTKDSVLALAASAEASSEHPVGTAIVEASRARGVSKLEPAVEGFQSTPGMGVS 1042
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A260A7Y5_9NOCA (Copper-translocating P-type ATPase n=28 Tax=root TaxID=1 RepID=A0A260A7Y5_9NOCA) HSP 1 Score: 60.1 bits (144), Expect = 6.440e-9 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 7 KPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 +PT+T V G R D+VLA AAAAEA SEHPL RAIV+AARAR L+ V A AGFQ++P +G++ Sbjct: 405 EPTVTAVEVTGGRT-ADNVLALAAAAEADSEHPLARAIVEAARARNLT--VPAAAGFQSSPAVGVA 467
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: UPI001F0FC12F (cadmium-translocating P-type ATPase n=1 Tax=Gordonia sp. ABSL49_1 TaxID=2920941 RepID=UPI001F0FC12F) HSP 1 Score: 59.7 bits (143), Expect = 8.770e-9 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 7 KPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGI 201 +P +TD+VA +D D VLA AAAAE SEHPLGRAIV+AA R + +V+AVA F A PG G+ Sbjct: 350 QPVVTDIVALDETHDPDQVLAIAAAAENDSEHPLGRAIVEAAAQREI--RVAAVADFAALPGRGV 412
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A5B9EVU4_9RHOB (Copper-translocating P-type ATPase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A5B9EVU4_9RHOB) HSP 1 Score: 59.7 bits (143), Expect = 8.830e-9 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 7 KPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 +P LTD++A + D D +LAQ AA EALSEHPLGRA+VQAA+ +GL+ V V F A G G+S Sbjct: 509 RPVLTDIMA--LNGDEDGLLAQVAAVEALSEHPLGRAVVQAAKDKGLTLPV--VKDFTAITGFGLS 570
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A1Z4EEJ3_9MYCO (Cadmium-translocating P-type ATPase n=2 Tax=Mycobacterium shigaense TaxID=722731 RepID=A0A1Z4EEJ3_9MYCO) HSP 1 Score: 58.5 bits (140), Expect = 2.240e-8 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 10 PTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGI 201 P LT + A R D VL AA+AE SEHPLGRA+V AARARGL+ +S A FQA PG G+ Sbjct: 349 PQLTSIAATDDRYSDDDVLRIAASAEQFSEHPLGRAVVSAARARGLA--LSDAADFQALPGRGV 410
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: UPI001C55BA68 (heavy metal translocating P-type ATPase n=1 Tax=Streptomyces sp. JJ38 TaxID=2738128 RepID=UPI001C55BA68) HSP 1 Score: 58.2 bits (139), Expect = 3.070e-8 Identity = 37/66 (56.06%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 10 PTLTDVVAY-GVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 P + DV G D D +LA AAAAE SEHPLGRA+V+AAR RGL ++A GF ATPG G+S Sbjct: 350 PVVADVCPLPGGALDEDGLLALAAAAERGSEHPLGRAVVEAARGRGLD--LAAAEGFAATPGSGVS 413
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A4R8SUG8_9MYCO (Copper-exporting P-type ATPase B n=38 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A4R8SUG8_9MYCO) HSP 1 Score: 57.8 bits (138), Expect = 4.190e-8 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 10 PTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 PT+T V R D D+VLA AAAAEA SEHPL RAIV+AAR RGL +V+A +GF + P +G++ Sbjct: 337 PTVTGVEPIDGR-DADAVLALAAAAEADSEHPLARAIVEAARGRGL--RVTAASGFSSEPALGVT 398
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A4Y4E2U3_CELCE (Copper-translocating P-type ATPase n=2 Tax=Cellulosimicrobium cellulans TaxID=1710 RepID=A0A4Y4E2U3_CELCE) HSP 1 Score: 57.4 bits (137), Expect = 5.730e-8 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 7 KPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGI 201 +PT+T+V A G +D+D+VLA AAAAE+ SEHPL RAIV+AAR RGL V++ FQ++P +G+ Sbjct: 320 EPTVTEVEATG-DHDQDTVLALAAAAESDSEHPLARAIVRAARDRGLP--VASAQDFQSSPAVGV 381
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A0M2HBX6_9MICO (Copper-exporting P-type ATPase B n=6 Tax=Microbacterium TaxID=33882 RepID=A0A0M2HBX6_9MICO) HSP 1 Score: 57.0 bits (136), Expect = 7.860e-8 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 7 KPTLTDVVAYGVRN----DRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 +PT+ DV + V D D VLA AAAAEA SEHPL +AIV+AA+ RGL+ V+ +GFQ++P +G++ Sbjct: 401 EPTVVDVASVAVTGEDPIDADGVLALAAAAEADSEHPLAKAIVRAAKERGLA--VAPASGFQSSPAVGVT 468
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Match: A0A3S2XIT8_9HYPH (Copper-translocating P-type ATPase n=1 Tax=Methylobacterium oryzihabitans TaxID=2499852 RepID=A0A3S2XIT8_9HYPH) HSP 1 Score: 57.0 bits (136), Expect = 7.880e-8 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 7 KPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSRQVSAVAGFQATPGMGIS 204 +P LTD++ + D DSVLA AAA E SEHPLGRA+V AA ARGL+ V AV+ +A PG G++ Sbjct: 503 RPALTDLIPVPGQ-DPDSVLALAAALETRSEHPLGRAVVAAAEARGLA--VPAVSAVEAVPGFGLA 565 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11866.1197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11866.1197.1 >prot_H-paniculata_contig11866.1197.1 ID=prot_H-paniculata_contig11866.1197.1|Name=mRNA_H-paniculata_contig11866.1197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp MSKPTLTDVVAYGVRNDRDSVLAQAAAAEALSEHPLGRAIVQAARARGLSback to top mRNA from alignment at H-paniculata_contig11866:6366..7237+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11866.1197.1 ID=mRNA_H-paniculata_contig11866.1197.1|Name=mRNA_H-paniculata_contig11866.1197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=872bp|location=Sequence derived from alignment at H-paniculata_contig11866:6366..7237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11866:6366..7237+ >mRNA_H-paniculata_contig11866.1197.1 ID=mRNA_H-paniculata_contig11866.1197.1|Name=mRNA_H-paniculata_contig11866.1197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig11866:6366..7237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |