prot_H-paniculata_contig4851.11969.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4851.11969.1
Unique Nameprot_H-paniculata_contig4851.11969.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length737
Homology
BLAST of mRNA_H-paniculata_contig4851.11969.1 vs. uniprot
Match: D8LC61_ECTSI (Putative copper transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC61_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 6.580e-64
Identity = 333/810 (41.11%), Postives = 423/810 (52.22%), Query Frame = 0
Query:    2 SNGRRFCRRHGEGRRCKTIGCNKVDVGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKGAQAXXXXXXXXXXXXXXXXXXXXXXXXSGADVLXXXXXXXXXXXXXXXQKLVRKNNRCTKHAAEASVGSASATR-TSSAXXXXXXXXXXXXLSKQTPQTQLSEPID------AACSNRFAKANSSPSLPVEERHSDRRNSELNCDSLLPSLPVSKPARRQRFNWPPWAPAQATGRISHAVLGIAQRGWLFSCADRERHPASPAAGGDNDVVPDVGVANSDWISPHLWRRLAPPVPNMAAAVEAATGGAPARKLSGAGG---DWLPKSQSTMEPEAS-------------------SLTRSSAPTGTAAAAAATAGV-IPPRAVSPGFSIG--------VPGLRCDGGIDGVPAGSGVRLPQQERARDKAPGAQHTNG-----------RFPANGEDRNPTPSPPLRGISAPSVL------------PSISCGIANVCSAVRETSAERMVEVSDSTTCPILPRL-ANLGGYDTCKSNGVYANVLGPSYVRG-LSPT-----------ANPLGFSSAVSGVTASLGCSMAPSMQTLPMYSGPALAPTAFPSSTFAGAMDKTAAIQDQRRSSPDDDYGAAGRFDACTSYPPGERAAGWRSASPQQPTTKYISLSVVGMMCMTSCGQTVQRALSAVDGVRSVTVHFPTRTASVEVDTNHDLSVNDLIKALGEMGFSSTCVATSTTEEP-LDDGGVNAVWAIASALGLVDHGCAMAWGDPCTCGDDCQCVNCPQHMQKVPFAL 736
            S GRRFCRRHGEGRRCKT GC KVDVGGG+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KGAQAXXXXXXXXXXXXXXXXXXXXXXXXSGADVLXXXXXXXXXXXXXXX+KLVRKNNRCTKHA++ S G+ +  R  +SA   XXXXX    +S  T    L+E +       AA   R A +++ P   V      ++ +      +  + P   P+ R+R   PP  P +  G  S    G A  G L S +       SP+ G   DV P  G++           R    VP+  AA  A       ++L GA G   D +P+ +    P+ S                    L R      + AA AA+ G  +P  A +   S+G        +PG+    G + V   +G  +P  ER    AP  Q  +G            F     +R+P+ SP       PS+L            P+ + G    C         ++VE        +  R  A  GG D+ +      N   P + RG L+PT           ++P   +S  +    S+     P+ Q   + S P       P++                                     P ER     ++ P + T+ +ISLSV GMMCM +CGQTVQ+AL  V GV SVT+HFPTRTAS++VD   ++++ DL  AL  +GF S+CVAT+TT+EP L+  GVNAVWAIA+ALGLVD GCAMAWG PC+CGDDC+C+NCPQHM+KV  A+
Sbjct:   28 SGGRRFCRRHGEGRRCKTPGCMKVDVGGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGAQAXXXXXXXXXXXXXXXXXXXXXXXXSGADVLXXXXXXXXXXXXXXXKKLVRKNNRCTKHASDGSSGARAPPRPAASASLAXXXXXTKAAISATT--AALTEAVGVPQVPPAARHQRAAASSARPKSQVYSSCPTKQRAPPPSQRVAKATPDRPPSPRERHQSPPLRPHRRAGAESGG--GFAAGGPLPSMSLMAAREPSPSFGLGGDVPPPGGLSAL---------REPGAVPSAVAAAAAGPLLQGQQQLRGAVGRFQDGIPRGREVFSPDGSHPHHPRGMPQLAGMGSIGPGLPRFDGRDDSRAAQAASMGPELPHHAYA---SVGGQGLVRDLLPGVTVANGSERVDMVNGSWMPS-ERMVGPAPAPQGLDGVDNRAPPFRGGHFSKGAIERSPSVSP-----LPPSLLLQPXXXXFSMPFPASATGSREACG---XXXXXKVVEGGSRDAAGMNGRQSATYGGGDSDRVPLNAPNA--PVWERGGLAPTTTLAHPSAARTSDPQAAASTSAATAFSMSNGGLPTSQDAALSSRPVEPIRPLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKAP-ERTRACSTSPPAEQTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDAKANVTLGDLTSALDAIGFGSSCVATTTTQEPTLEQDGVNAVWAIANALGLVDPGCAMAWGRPCSCGDDCRCINCPQHMKKVSHAV 809          
BLAST of mRNA_H-paniculata_contig4851.11969.1 vs. uniprot
Match: A0A6H5KKC5_9PHAE (HMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC5_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 5.190e-41
Identity = 306/769 (39.79%), Postives = 387/769 (50.33%), Query Frame = 0
Query:    2 SNGRRFCRRHGEGRRCKTIGCNKVDVGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKGAQAXXXXXXXXXXXXXXXXXXXXXXXXSGADVLXXXXXXXXXXXXXXXQKLVRKNNRCTKHAAEASVGSASATR-TSSAXXXXXXXXXXXXLSKQTPQTQLSEPID------AACSNRFAKANSSPSLPVEERHSDRRNSELNCDSLLPSLPVSKPARRQRFNWPPWAPAQATGRISHAVLGIAQRGWLFSCADRERHPASPAAGGDNDVVPDVGVANSDWISPHLWRRLAPPVPNMAAAVEAATGGAPARKLSGAGGDWLPKSQSTMEPEAS-------------------SLTRSSAPTGTAAAAAATAGVIPPRAVSPGFSIG------VPGLRCDGGIDGVPAGSGVRLPQQERARDKAPGAQHTNGRFPANGEDRNPT--PSPPLRGISAPSVLPSISCGIANVCSAVRETSAE------RMVEVSDSTTCPILPRLANLGGYDTCKSNGVYANVL------GPSYVRG-LSPT---ANPLG-----------------FSSAVSGVTASLGCSMAPSMQTLPMYSGPALAPTAFPSSTFAGAMDKTAAIQDQRRSSPDDDYG--AAGRFDACTSYPPGERAAGWRSASPQQPTTKYISLSVVGMMCMTSCGQTVQRALSAVDGVRSVTVHFPTRTASVEVDTNHDLSVNDLIKALGEMGFSSTCVATSTTEEP-LDDGGVNAVWAIASALG 700
            S GRRFCRRHGEGRRCKT GC KVDVGGG+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KGAQAXXXXXXXXXXXXXXXXXXXXXXXXSGADVLXXXXXXXXXXXXXXX+KLVRKNNRCTKHA++ S G+ +  R  +SA  XXXXXX    +S  T    L+E +       AA   R A + + P   V      +  +  +      + P   P+ R+R   PP  P +  G  S    G A  G L S +       SP+ G   DV P  G+  S    P    R  P     AAA     G        G   D +P+       + +                    L R     G+ AA AA+ G  P          G      +PG+    G + V   +G  +P  ER   +AP       +      +R+P+  P PP   +  P   P  S   +   +  RE          ++VE             A + G ++    G  ++ +       P++ RG L+PT   A+P                   FSS   G++ S   +++  +   P+   PA A +A P                          G  A  R  AC++ PP E+            T+ +ISLSV GMMCM +CGQTVQ+AL  V GV SVT+HFPTRTAS++VDT  ++++ DL  AL  +GF S+CVAT+T +EP L+  GVNAVWAIA+ALG
Sbjct:  173 SGGRRFCRRHGEGRRCKTPGCMKVDVGGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKGAQAXXXXXXXXXXXXXXXXXXXXXXXXSGADVLXXXXXXXXXXXXXXXKKLVRKNNRCTKHASDGSSGARAPPRPAASASLXXXXXXTKAAISATT--AALTEAVGVPQVPPAARHQRAAASLAGPKNQVYSPSPTKHTAPPSSQRGARATPDRPPSPRERHQSPPLRPHRRVGAESGG--GFAAGGPLPSMSLMAAREPSPSFGLGGDVPPPGGL--SALREPACGERAVPSAVAAAAAGPLLQGQQQLHGAVGRAEDGIPRGPEVFSADGNHPQHPRGMPQLAGMGAIGPGLRRFDGRDGSRAAQAASMGTEPSHHAYAAVDGGGLDRDLLPGVMVANGSERVGMANGSWMPS-ERMVGQAPAPPCRGSQLSKGAIERSPSVSPLPPSLLLQLP---PLFSMPFSASATGSREACGGGGRCGGKVVEGXXXXXXXXSRDAAGINGRESATYGGGDSDQVPLNAPNAPAWERGGLAPTMTLAHPSAARASDLQAAASTSAATVFSSKNGGLSTSQDAALSARLVE-PIRPLPAAA-SAAPRXXXXXXXXXXXXXXXXXXXXXXXXXGDKAPERTRACSTSPPAEQ------------TSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDTEANVTLGDLTSALDAIGFDSSCVATTTAQEPTLEQDGVNAVWAIANALG 917          
BLAST of mRNA_H-paniculata_contig4851.11969.1 vs. uniprot
Match: A0A836CMV3_9STRA (HMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMV3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 5.600e-24
Identity = 66/171 (38.60%), Postives = 85/171 (49.71%), Query Frame = 0
Query:  606 YISLSVVGMMCMTSCGQTVQRALSAVDGVRSVTVHFPTRTASVEVDTNHDLSVNDLIKALGEMGFSSTCVATS-----------------------------------------------TTEEPLDDGGVNAVWAIASALGLVDHGCAMAWGDPCTCGDD-CQCVNCPQH 728
            Y+SL+V GMMCM  CG+TV+R L+ V GV +V+VHFPTRTASV+VD      +  L++ L  +GF +TC++                                                 T+EEP+     NAVWAIA  LGLVD GC M+WG  C C  D C+C NC  H
Sbjct: 1063 YVSLAVEGMMCMRDCGETVRRCLAGVPGVVTVSVHFPTRTASVQVDPASGAGIETLVERLEAVGFQATCISRCAVDMQSMCRVMRNVRSSQGTLRVLQSIXXXXXXXXXXXXXXXXXXXXTSEEPMVAQSENAVWAIAEVLGLVDRGCPMSWGGACACDPDKCRCTNCDVH 1233          
BLAST of mRNA_H-paniculata_contig4851.11969.1 vs. uniprot
Match: A0A7S3NK13_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK13_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.050e-10
Identity = 44/134 (32.84%), Postives = 57/134 (42.54%), Query Frame = 0
Query:  604 TKYISLSVVGMMCMTSCGQTVQRALSAVDGVRSVTVHFPTRTASVEVDTNHDLSVNDLIKALGEMGFSSTCVATSTTEEPLDDGGVNAV---------WAIASALGLVDHGCAMAWGDPCTCGDDCQCVNCPQH 728
            TK + L V GMMC+ SCG T+ RAL  +   R V +  P R        N      +++K L  +GF S  V+ +     L  G              W IA  LGL+   C    G  C+CG  C C  CP H
Sbjct:  219 TKSVVLRVPGMMCLGSCGATIDRALCVLPETRVVGIDVPRRLVHCHTPVNP----YEIVKTLNHVGFDSAIVSIAAKSANLSSGSFTEFCDPPENSFEWDIADTLGLISASCDRRCGGNCSCGPSCMCHWCPVH 348          
BLAST of mRNA_H-paniculata_contig4851.11969.1 vs. uniprot
Match: A0A2D4BPL9_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPL9_PYTIN)

HSP 1 Score: 57.8 bits (138), Expect = 8.820e-5
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query:  605 KYISLSVVGMMCMTSCGQTVQRALSAVDGVRSVTVHFPTRTASVEVDTNHDLSVNDLIKALGEMG--FSSTCVATSTTEEP 683
            + + L V GM C  +C   VQ+AL+ VDGV+S  V FP++ A+VEV++   L+  DLI  +   G  F ++    +  +EP
Sbjct:  470 RVVKLDVTGMSCAKNCASKVQKALAEVDGVQSAVVDFPSKVATVEVNSRSKLTAADLIATVRAAGAKFDASVHNAAREKEP 550          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4851.11969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LC61_ECTSI6.580e-6441.11Putative copper transporter n=1 Tax=Ectocarpus sil... [more]
A0A6H5KKC5_9PHAE5.190e-4139.79HMA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CMV3_9STRA5.600e-2438.60HMA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3NK13_9STRA1.050e-1032.84Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A2D4BPL9_PYTIN8.820e-537.04Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 735..736
NoneNo IPR availableGENE3D3.30.70.100coord: 605..676
e-value: 1.2E-14
score: 56.4
NoneNo IPR availablePANTHERPTHR31827FAMILY NOT NAMEDcoord: 5..137
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 609..670
e-value: 1.2E-10
score: 41.7
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 606..674
score: 14.555
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 601..673

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4851contigH-paniculata_contig4851:1244..8629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4851.11969.1mRNA_H-paniculata_contig4851.11969.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4851 1244..8659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4851.11969.1 ID=prot_H-paniculata_contig4851.11969.1|Name=mRNA_H-paniculata_contig4851.11969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=737bp
MSNGRRFCRRHGEGRRCKTIGCNKVDVGGGSCRRHGGGRRCGADGCLKTD
VGGGFCVSHGGGKRCQAQDCQKGAQAGGVFCKSHGGGRRCRIDGCMTSAQ
SGADVLCIKHGGGKRCMVSGCQKLVRKNNRCTKHAAEASVGSASATRTSS
ATSSPQQSPTSAPLSKQTPQTQLSEPIDAACSNRFAKANSSPSLPVEERH
SDRRNSELNCDSLLPSLPVSKPARRQRFNWPPWAPAQATGRISHAVLGIA
QRGWLFSCADRERHPASPAAGGDNDVVPDVGVANSDWISPHLWRRLAPPV
PNMAAAVEAATGGAPARKLSGAGGDWLPKSQSTMEPEASSLTRSSAPTGT
AAAAAATAGVIPPRAVSPGFSIGVPGLRCDGGIDGVPAGSGVRLPQQERA
RDKAPGAQHTNGRFPANGEDRNPTPSPPLRGISAPSVLPSISCGIANVCS
AVRETSAERMVEVSDSTTCPILPRLANLGGYDTCKSNGVYANVLGPSYVR
GLSPTANPLGFSSAVSGVTASLGCSMAPSMQTLPMYSGPALAPTAFPSST
FAGAMDKTAAIQDQRRSSPDDDYGAAGRFDACTSYPPGERAAGWRSASPQ
QPTTKYISLSVVGMMCMTSCGQTVQRALSAVDGVRSVTVHFPTRTASVEV
DTNHDLSVNDLIKALGEMGFSSTCVATSTTEEPLDDGGVNAVWAIASALG
LVDHGCAMAWGDPCTCGDDCQCVNCPQHMQKVPFAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
IPR036163HMA_dom_sf