prot_H-paniculata_contig4845.11962.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4845.11962.1
Unique Nameprot_H-paniculata_contig4845.11962.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
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BLAST of mRNA_H-paniculata_contig4845.11962.1 vs. uniprot
Match: D7G4A3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 7.230e-14
Identity = 31/52 (59.62%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:    5 QGLWSTMTLVLRAKSTKYEVQAHSRGPIFIVPEEFSEKHLVLFLAENLLGFS 56
            +GLWST+ LVLRA+S  YEVQ HS GP+ + PE+FSE++LV FL+E LL ++
Sbjct:  163 RGLWSTVVLVLRARSDSYEVQVHSGGPVLVFPEKFSERNLVRFLSEVLLSYT 214
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BLAST of mRNA_H-paniculata_contig4845.11962.1 vs. uniprot
Match: A0A6H5JN32_9PHAE (DUF4460 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN32_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.130e-13
Identity = 31/52 (59.62%), Postives = 42/52 (80.77%), Query Frame = 0 
Query:    5 QGLWSTMTLVLRAKSTKYEVQAHSRGPIFIVPEEFSEKHLVLFLAENLLGFS 56
            +GLWST+ LVLRA+S  YEVQ HS GP+ + PE+FSE++LV FL+E LL ++
Sbjct:  346 RGLWSTVVLVLRARSESYEVQVHSGGPVLVFPEKFSERNLVRFLSEVLLSYT 397
[Close]
BLAST of mRNA_H-paniculata_contig4845.11962.1 vs. uniprot
Match: D7G1D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D8_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 4.740e-13
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0 
Query:    5 QGLWSTMTLVLRAKSTKYEVQAHSRGPIFIVPEEFSEKHLVLFLAENLLGFS 56
            +GLWST+ LVLRA+S  YEVQ HS GP+ + PE+FSE+ LV FL+E LL ++
Sbjct:  282 RGLWSTVVLVLRARSESYEVQVHSGGPVLVFPEKFSERSLVRFLSEVLLSYT 333
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4845.11962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4A3_ECTSI7.230e-1459.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN32_9PHAE3.130e-1359.62DUF4460 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G1D8_ECTSI4.740e-1359.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4845contigH-paniculata_contig4845:11224..11394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4845.11962.1mRNA_H-paniculata_contig4845.11962.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4845 10868..12498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4845.11962.1 ID=prot_H-paniculata_contig4845.11962.1|Name=mRNA_H-paniculata_contig4845.11962.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MRFRQGLWSTMTLVLRAKSTKYEVQAHSRGPIFIVPEEFSEKHLVLFLAE
NLLGFS*
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