prot_H-paniculata_contig4842.11956.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4842.11956.1
Unique Nameprot_H-paniculata_contig4842.11956.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length249
Homology
BLAST of mRNA_H-paniculata_contig4842.11956.1 vs. uniprot
Match: A0A6H5JN80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN80_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 8.390e-80
Identity = 126/228 (55.26%), Postives = 156/228 (68.42%), Query Frame = 0
Query:    2 RIDYDEYAHDYSALNATRSLVTNQDDLDLAYPSPLAMTHYNWNYDDRFKAEVIRNVFRAYWSMSLAWGLLAEYAKEEDITYDAVMLMRPDVWYHIDTDLLKHRFPLPDNVVFMPNFDTTVEDDKRKNDRFSYGSMSAMRIMTNRLATFVEATADQITRKETKQPIDSEFVLGHHLHNHDISVQPVRFPVTRIRLDGSIPGPDQERVENICESGEDPVACDMVKFGFNL 229
            ++ Y  Y +D+ ALN TRSLVTNQDD DL +  PL+MTHYNWNY +     VIRNVFRAYWSMS++WGL+AE+A      YDAV+L RPDVW+H D DL     PLP++ VF+P+FD  +    RKNDRF+YGSM+ MR++ NRLAT + A   Q+T +     IDSE+VLGHHL  +DISVQ +   +TRIRL   IP  D   VE  C SGEDP+AC MV  GF  
Sbjct:  138 KVMYGPYVNDFLALNPTRSLVTNQDDFDLIWTDPLSMTHYNWNYPEEDAPGVIRNVFRAYWSMSMSWGLMAEHAVAGGFEYDAVVLARPDVWFHYDVDLPTRTLPLPEHTVFLPSFDAELAAQVRKNDRFAYGSMTTMRVVMNRLATLLAADTGQLTGE-----IDSEYVLGHHLRKNDISVQMLDLLLTRIRLTRDIPMYDHRLVEEACLSGEDPMACRMVDAGFKF 360          
BLAST of mRNA_H-paniculata_contig4842.11956.1 vs. uniprot
Match: A0A835Z6Q8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.710e-34
Identity = 81/212 (38.21%), Postives = 113/212 (53.30%), Query Frame = 0
Query:    3 IDYDEYAHDYSALNATRSLVTNQDDLDLAYPSPLAMTHYNWNYDDRFKAEVIRNVFRAYWSMSLAWGLLAEYAKEEDITYDAVMLMRPDVWYHIDTDLLKHRFPLPDNVVFMPNFDTTVEDDKRKNDRFSYGSMSAMRIMTNRLATFVEATADQITRKETKQPIDSEFVLGHHLHNHDISVQPVRFPVTRIRLDGSIPGPDQERVENICESG 214
            + Y  +  D   L  TR L+T+QDD D  YP   A+T   W YD+      IRN+FRA  S+SL W ++A++A E  I Y  V+L+RPDV Y  D D+++    LP+N  F+P+F    +     NDRF+YG  SAMR   NRL T V          E    ++SE +L  HL  H++SV P+     R+R  G +P  D   V + C+ G
Sbjct:  129 VAYANHFTDVQMLRPTRYLITSQDDFDQTYPDIHAITPLKWQYDED---ATIRNIFRAQNSLSLVWSIMADHASEHKIDYAGVVLLRPDVLYLNDLDIVQLG-ELPENTTFIPSF----QSYGGYNDRFAYGRPSAMRAYCNRLDTMVSRAI------EAGASVNSEKLLVRHLRAHNVSVAPIDMTFARVRTTGGVPRKDTNLVLDACKRG 326          
BLAST of mRNA_H-paniculata_contig4842.11956.1 vs. uniprot
Match: A0A836CL92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL92_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.600e-31
Identity = 78/201 (38.81%), Postives = 113/201 (56.22%), Query Frame = 0
Query:   11 DYSALNATRSLVTNQDDLDLAYPSPLAMTHYNWNYDDRFKAEVIRNVFRAYWSMSLAWGLLAEYAKEEDITYDAVMLMRPDVWYHIDTDLLKHRFPLPDNVVFMPNFDTTVEDDKRKNDRFSYGSMSAMRIMTNRLATFVEATADQITRKETKQPIDSEFVLGHHLHNHDISVQPVRFPVTRIRLDGSIPGPDQERVENIC 211
            D   L+ TR L+T+QDDLD+ YP    ++   W Y++      I+N+FRA  S+SL+W ++A YA E  I Y  V+++RPDV Y  D D+++    LP++ VF+ NF          NDRF+YG  SAMR+  +RL T V +TA    R      ++SE +L HHL  H+I+V  V     RIR  G +P  D + +   C
Sbjct:   82 DVQRLHPTRYLITSQDDLDMVYPDVHLLSPLEWLYNEN---TTIQNIFRAQNSLSLSWAVMANYAAEHHIDYAGVVILRPDVLYLRDLDIVRQGI-LPEHTVFVANFGHYGGC----NDRFAYGHASAMRVYAHRLDTMVGSTALPAKR------VNSEQLLVHHLQAHNINVTLVDMLFARIRSTGQVPRLDMKILRRAC 268          
BLAST of mRNA_H-paniculata_contig4842.11956.1 vs. uniprot
Match: A0A836CLC1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC1_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.720e-31
Identity = 76/215 (35.35%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   11 DYSALNATRSLVTNQDDLDLAYPSPLAMTHYNWNYDDRFKAEVIRNVFRAYWSMSLAWGLLAEYAKEEDITYDAVMLMRPDVWYHIDTDLLKHRFPLPDNVVFMPNFDTTVEDDKRKNDRFSYGSMSAMRIMTNRLATFVEATADQITRKETKQPIDSEFVLGHHLHNHDISVQPVRFPVTRIRLDGSIPGPDQERVENICESGEDPVACDMVKF 225
            D   L  TR L+T+QDD DL YP    M+   W+Y D      ++N+FRA  S++L W ++A++A E  I YDAV+ +RPDV Y  D D+   R  LP+   F+ +F    +     NDRF+YG  SAMR+  NRL + + A    +  +++    +SE +L  HL  H++SV       +R+R  G++P  D+  V + C+    P AC  +++
Sbjct:  100 DVQKLRPTRYLITSQDDFDLTYPDVQTMSPLQWSYPDN---TTVQNIFRAQNSLALVWSIMADFAAEHSIDYDAVVALRPDVLYLRDLDI-PQRGVLPERTAFVADF----QHYGGCNDRFAYGRPSAMRVYANRLDSMLNAALRPVGDRKS---FNSEQLLQRHLEAHNVSVVLADMLFSRVRSTGALPKQDKRLVVDACKQHL-PGACKALRW 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4842.11956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JN80_9PHAE8.390e-8055.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6Q8_9STRA5.710e-3438.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CL92_9STRA2.600e-3138.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLC1_9STRA3.720e-3135.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4842contigH-paniculata_contig4842:7537..12271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4842.11956.1mRNA_H-paniculata_contig4842.11956.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4842 3056..13691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4842.11956.1 ID=prot_H-paniculata_contig4842.11956.1|Name=mRNA_H-paniculata_contig4842.11956.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
MRIDYDEYAHDYSALNATRSLVTNQDDLDLAYPSPLAMTHYNWNYDDRFK
AEVIRNVFRAYWSMSLAWGLLAEYAKEEDITYDAVMLMRPDVWYHIDTDL
LKHRFPLPDNVVFMPNFDTTVEDDKRKNDRFSYGSMSAMRIMTNRLATFV
EATADQITRKETKQPIDSEFVLGHHLHNHDISVQPVRFPVTRIRLDGSIP
GPDQERVENICESGEDPVACDMVKFGFNLHSGDSSDGTKRRCVLHVLC*
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