prot_H-paniculata_contig48380.11949.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig48380.11949.1
Unique Nameprot_H-paniculata_contig48380.11949.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length87
Homology
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A3M6VPY8_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPY8_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 9.860e-9
Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGATAHMTP  E +FDY+   +++ VT+A+G+ + + G   + +   D   I       V H+PGLD  L S+  +  +GLN
Sbjct:  160 WLIDSGATAHMTPHREDLFDYKNLVTSIEVTIADGKKIRVVGTGSVRLTGIDGKRIRMLD---VLHIPGLDRRLLSVGKLAERGLN 242          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A2P4XNP3_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XNP3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.240e-7
Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYE-TCSNLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSG-------VAHVPGLDTNLFSLQIVVNQGL 85
            W+ DSGAT+HMTP  E +FD E T S++ VT+A+G+ L + G          +G +   SL+G       V ++PGLD  L S+  +  +GL
Sbjct:  155 WLIDSGATSHMTPFREDLFDLEGTVSSIEVTIADGKKLRVAG----------QGTVRLTSLNGKHIKMMEVLYIPGLDRRLLSVGKLAERGL 236          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A329SN38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SN38_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.630e-7
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGATAHMTP    +F+YE    N+ VT+A+G+ + + G   + +   D   I    +  V H+PGLD  L S+  +  +G++
Sbjct:  263 WLIDSGATAHMTPHRNDLFEYEDLEENIEVTIADGKKIRVVGTGSVRLMGIDGKRI---KMVEVLHIPGLDRRLLSVGKLAERGMS 345          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A225UGS0_9STRA (Integrase, catalytic core protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGS0_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.920e-7
Identity = 29/86 (33.72%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGATAHMTP  + +F+Y   S +++VT+A+G+ + + G   + +   D   I       V ++PGLD  L S+  +  +G++
Sbjct:  245 WLIDSGATAHMTPHRDDLFEYSAMSKDMYVTIADGKKIRVAGTGSVRLTGIDAKSIRMVE---VLYIPGLDRRLLSVGKLAERGMS 327          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A6A3X5U6_9STRA (CCHC-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X5U6_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.160e-7
Identity = 30/86 (34.88%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGATAHMTP    +F+Y+   SN+ VT+A+G+ + + G   + +   D   I    +  V ++PGLD  L S++ +  +G++
Sbjct:  266 WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRI---KMIDVLYIPGLDRQLLSVRRLAERGMS 348          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A6A4BQ03_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BQ03_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.910e-7
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGATAHMTP    +F+Y+   SN+ VT+A+G+ + + G   + +   D   I    +  V ++PGLD  L S+  +  +G++
Sbjct:  242 WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRI---KMIDVLYIPGLDRQLLSVSRLAERGMS 324          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: Q967L5_AEDAE (Uncharacterized protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q967L5_AEDAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.110e-6
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYRKMLVWTKDRG-EIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGA+AHMT        +E     ++T+A+G+   I G    ++   D   E+ +  +SGV +VPGL TNL S++ +  + L+
Sbjct:  275 WIIDSGASAHMTCDKSFFITFEESCGGYITLADGKKTQILGEGAGVLHGIDGDDEVIRIDISGVKYVPGLSTNLISVEKLAQKKLD 360          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A4Y2F840_ARAVE (Uncharacterized protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2F840_ARAVE)

HSP 1 Score: 52.4 bits (124), Expect = 1.440e-6
Identity = 32/84 (38.10%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQG 84
            W+ADSGA+ HMTP  E    YE+ S+   V + N ET+   G   + V     G+     LS V  VP +  NLFS+   V++G
Sbjct:   12 WLADSGASVHMTPQKEYFLSYESFSSPKDVKIGNNETMFAFGLGTVKVRMLVSGKWENNHLSDVWFVPEVSRNLFSVSRAVDKG 95          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A6A3IEW9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IEW9_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.020e-6
Identity = 29/86 (33.72%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGAT HMTP    +F+Y+   SN+ VT+A+G+ + + G   + +   D   I    +  V ++PGLD  L S+  + ++G++
Sbjct:  266 WLIDSGATVHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRI---KMIDVLYIPGLDRQLLSVSRLADRGVS 348          
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Match: A0A6A3KTF1_9STRA (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KTF1_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 2.040e-6
Identity = 29/86 (33.72%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    2 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYRKMLVWTKDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN 86
            W+ DSGAT HMTP    +F+Y+   SN+ VT+A+G+ + + G   + +   D   I    +  V ++PGLD  L S+  + ++G++
Sbjct:  266 WLIDSGATVHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRI---KMIDVLYIPGLDRQLLSVSRLADRGVS 348          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48380.11949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M6VPY8_9STRA9.860e-938.37CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A2P4XNP3_9STRA1.240e-738.04Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A329SN38_9STRA1.630e-736.05Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A225UGS0_9STRA2.920e-733.72Integrase, catalytic core protein (Fragment) n=1 T... [more]
A0A6A3X5U6_9STRA4.160e-734.88CCHC-type domain-containing protein n=5 Tax=Phytop... [more]
A0A6A4BQ03_9STRA5.910e-734.88Retrovirus-related Pol polyprotein from transposon... [more]
Q967L5_AEDAE1.110e-633.72Uncharacterized protein n=1 Tax=Aedes aegypti TaxI... [more]
A0A4Y2F840_ARAVE1.440e-638.10Uncharacterized protein n=1 Tax=Araneus ventricosu... [more]
A0A6A3IEW9_9STRA2.020e-633.72Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3KTF1_9STRA2.040e-633.72Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48380contigH-paniculata_contig48380:641..901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48380.11949.1mRNA_H-paniculata_contig48380.11949.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig48380 641..901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig48380.11949.1 ID=prot_H-paniculata_contig48380.11949.1|Name=mRNA_H-paniculata_contig48380.11949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
FWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYRKMLVWT
KDRGEIHKFSLSGVAHVPGLDTNLFSLQIVVNQGLN*
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