prot_H-paniculata_contig4838.11948.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4838.11948.1
Unique Nameprot_H-paniculata_contig4838.11948.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length372
Homology
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI)

HSP 1 Score: 562 bits (1448), Expect = 1.450e-199
Identity = 284/372 (76.34%), Postives = 312/372 (83.87%), Query Frame = 0
Query:    1 MLGRVTKYRVNNDAPSEVFDADSPEDRADRHL-PYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAMP 371
            MLGRVTKYRV NDAPSEVF+A S ++R DR L  Y +RV K LD+K    G    NEL FDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMA+P  FEF+ + + GE +E TEFNTCVFKLE+KNP +PADMP+PMP G SYAAGPRRT+N+F    +WC HG+Q  RF  +GGL PVHDDIL+AKLRPGQEI  EMHCRKG+GKDHAKFSPVATASYRLLPVV+LKEE+ G+EAEELV KCPLNVFDIEDLG   KRAKVARPRDCTMCRECIREPGWSDKVSLSR ADHFIF IESVGML PK          +LLKDSIQVLRQKCD++I+EVEA+E GVDFDEAMP
Sbjct:    1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVQSGGGHTNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGE-EGGEQDEPTEFNTCVFKLEVKNPADPADMPDPMPTGTSYAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPK----------ELLKDSIQVLRQKCDSMIAEVEAFESGVDFDEAMP 361          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 1.380e-167
Identity = 257/374 (68.72%), Postives = 286/374 (76.47%), Query Frame = 0
Query:    1 MLGRVTKYRVNNDAPSEVFDADSPEDRADRHL-PYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCV-FKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGG-KWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAMP 371
            MLGRVTKYRV NDAPSEVF+A S ++R DR L  Y +RV K LD+K    G   +NEL FDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMA+P  FEF+   + GE +EAT+    V  +   + P  P     P   G     G        + G  +WC HG+Q  RF  +GGL PVHDDIL+AKLRPGQEI  EMHCRKG+GKDHAKFSPVATASYRLLPVV+LK+E+ G+EAEELV KCPLNVFDIEDLG   KRAKVARPRDCTMCRECIREPGWSDKVSLSR ADHFIF IESVGML PK          +LLKDSIQVLRQKCD++I+EVEA+E G+DFDEAMP
Sbjct:    1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVRSGGGHKNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGD-EGGEQDEATDGVQHVRVQAGGEKPGGPGGHAGPYADGYELCGGAATDHERLQVGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKQEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPK----------ELLKDSIQVLRQKCDSMIAEVEAFESGIDFDEAMP 363          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A7S2RJI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJI0_9STRA)

HSP 1 Score: 321 bits (822), Expect = 1.420e-104
Identity = 173/359 (48.19%), Postives = 238/359 (66.30%), Query Frame = 0
Query:    5 VTKYRVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIG 363
            + +Y+V N   SE F   S    A  H P+  R+ + + ++V +     E EL FDL+GVDAS+ANALRRI+LAEV T+AIE+VY+ MNS +IHDE+LAHRLGL+PI  DP  F    K K  +DE     NT VF L+++   + AD     P G++       T++++ +  +W    +Q   F +  G+ PVH+DIL+AKLRPGQ I  E HC++GVGKDHAKFSPVATASYRLLP + + +E+ GE AE+L   CP+NVFDIEDLG G++RA  ARPRDCTMCRECIR+ GW ++V L R ADH+IF +E+VGML+P+           ++K++I++LR+KC   + E++    G
Sbjct:    9 IRRYQVKNQGVSEEFQPVSAAADASVHRPFSDRLLEGMRIEVME---SSEEELVFDLIGVDASVANALRRIMLAEVPTMAIEYVYIEMNSGMIHDEVLAHRLGLVPIQVDPRLF----KDKVPQDE-INSKNTVVFGLDVQCSRS-ADT---RPPGSTEPY----TMSVYSKHLQWLPQADQAEEFPD--GIRPVHEDILLAKLRPGQHIKLEAHCQRGVGKDHAKFSPVATASYRLLPDIVVADEVKGETAEQLKAMCPMNVFDIEDLG-GERRATAARPRDCTMCRECIRQEGWDERVKLYRAADHYIFKVEAVGMLAPR----------DIVKEAIRILREKCTDFLGELQGDPAG 338          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A024TZC9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZC9_9STRA)

HSP 1 Score: 317 bits (812), Expect = 2.240e-103
Identity = 180/367 (49.05%), Postives = 234/367 (63.76%), Query Frame = 0
Query:   10 VNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGV------DFDEAM 370
            V  DAP  V D +S    A     +     K+L +K+       ++E+ FDL+G+DASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P+ + GE   AT+ NT VFKL++    +P+D PN + K  +         +++ R  +W   G QE RF   G + PV +DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRLLP ++    +VG +A+ L   CP+NVFDIEDL      A  ARPR+CTMCRECIR PGWSDKV + R +DHFIF +E+VGML P+           LL ++I+VL  KCD  +  + A +  +      D D+AM
Sbjct:    8 VGLDAP-HVPDTESESSHA-----FVDNFKKQLKVKIQSL---TDDEIVFDLIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEHEEGE---ATDENTLVFKLDVTCTADPSD-PNDISKATN--------ASVYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPEITFPAPVVGADAKTLQKTCPMNVFDIEDLA-----AVAARPRNCTMCRECIRAPGWSDKVKMGRVSDHFIFSVETVGMLPPE----------DLLPEAIKVLVAKCDVAVESLNAVDDELRENADEDEDDAM 335          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: W4GC85_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GC85_9STRA)

HSP 1 Score: 313 bits (803), Expect = 5.660e-102
Identity = 171/322 (53.11%), Postives = 212/322 (65.84%), Query Frame = 0
Query:   40 KRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYE 361
            K   +K+     ED   + FDLVG+DASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P+ + GE   AT+ NT VFKL++    +P D     P   S A       +++ R  +W   G QE RF   G + PV +DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRLLP +S    +VG +A+ L   CP+NVFDIEDL      A  ARPR+CTMCRECIR PGWSDKV L R +DHFIF +E+VGML P+           LL ++I+VL  KCD  +  + A +
Sbjct:   32 KHFKVKIQSLSDED---IVFDLVGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEHEEGE---ATDENTLVFKLDVTCTADPND-----PADISKAT----NASVYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPEISFPAPVVGADAKTLQKTCPMNVFDIEDLA-----AVAARPRNCTMCRECIRAPGWSDKVKLGRVSDHFIFSVETVGMLRPE----------DLLPEAIKVLVAKCDVAVESLNAVD 320          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A6G0XIR3_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIR3_9STRA)

HSP 1 Score: 313 bits (801), Expect = 8.180e-102
Identity = 173/362 (47.79%), Postives = 226/362 (62.43%), Query Frame = 0
Query:    9 RVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAM 370
            R+  DAP        P+   +    +     K+  +K+     ED   + FD++G+DASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P+ + GE   AT+ NT VFKL++    +P D P+ + K  + +        I+ R  +W   G QE RF   G + PV +DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRLLP +     + G +A+ L   CP+NVFDIED+      A  ARPR+CTMCRECIR PGWSDKV L R +DHFIF +E+VGML P+           LL ++++VL  KCD  +  + A +  +  DE M
Sbjct:    7 RIGTDAPHV------PDTEIETSHAFVDNFKKQFKVKIQSLTEED---IVFDVIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPELEEGE---ATDENTLVFKLDVTCTADPDD-PDDISKATNSS--------IYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPDIQFPAPVTGADAKTLQKTCPMNVFDIEDMA-----AVAARPRNCTMCRECIRAPGWSDKVELGRVSDHFIFSVETVGMLPPE----------DLLPEALKVLMTKCDVAVESLNAMDDELAEDETM 329          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A662X4Y9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Y9_9STRA)

HSP 1 Score: 311 bits (796), Expect = 8.950e-101
Identity = 173/346 (50.00%), Postives = 225/346 (65.03%), Query Frame = 0
Query:    9 RVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLI 354
            RV  DAP  V +A + E      +   +R  K     + D      +E+ FDL+GVDASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +PA      PK  S A       +++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P V L E + G++A+ LV +C + +FDIED+G G   A V   R CTMCR CIREPGW++K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL +KC+  +
Sbjct:   11 RVGQDAPHVVRNAAAFESLGSDFVEQSKRQVKVKIQSLTD------DEIQFDLMGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLRVDPREFQAFPD---HEEAEATDENTIVFKLDVTCAYDPAH-----PKDLSKAV----HASVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELTEAVEGDDAKRLVEECQMGLFDIEDMG-GVPTAVVKDQRACTMCRNCIREPGWNEKIRLGRQSDHFIFSVESVGMIKPE----------ELLPEALNVLMEKCNVAL 324          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.230e-100
Identity = 167/319 (52.35%), Postives = 216/319 (67.71%), Query Frame = 0
Query:   34 YPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVV-KCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCD 351
            Y +++ K++ +K+     E   E+ FDL+GVDASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +PA      P+ A+ A       +++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P + L + + G +A +LV  KC L VFDIEDLG  D  A V   R C MCRECIREPGW +K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL  KC+
Sbjct:   30 YVEQLKKQVKVKIQSLSEE---EIVFDLIGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPREFQAFPD---NEEAEATDENTIVFKLDVTCRFDPAH-----PQDAAKAL----HTSVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHIELAQPVTGADARQLVADKCALGVFDIEDLGGVDT-AVVKDARSCNMCRECIREPGWDEKIKLGRVSDHFIFSVESVGMIKPE----------ELLPEALNVLVDKCN 319          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: K3X7N1_GLOUD (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7N1_GLOUD)

HSP 1 Score: 305 bits (782), Expect = 1.020e-98
Identity = 167/338 (49.41%), Postives = 226/338 (66.86%), Query Frame = 0
Query:   34 YPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVK-CPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLI---SEVEAYEIGVDFD 367
            Y +++ K++ +K+       ++E+ FDL+G+DASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +PA  PN + K            +++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P V LK+++ G +A++LV   C   +FDIED+G G   A V   R C+MCR CIREPGW +K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL  KC+  +   ++VE  E+  D D
Sbjct:   30 YVEQLKKQVKVKIQSL---TDDEIVFDLIGIDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPREFQAFPD---HEEAEATDENTIVFKLDVTCKYDPAH-PNDLSKALH--------TSVYSRDLEWVPQGNQEERF---GSIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELKQKVTGADAKKLVEDVCNAGLFDIEDIG-GVPTAFVKDSRTCSMCRNCIREPGWEEKIQLGRISDHFIFSVESVGMIKPE----------ELLPEALNVLVDKCNLALESFNQVEDEEMEGDED 338          
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: D0NVB2_PHYIT (DNA-directed RNA polymerases I and III subunit RPAC1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0NVB2_PHYIT)

HSP 1 Score: 305 bits (780), Expect = 1.690e-98
Identity = 172/365 (47.12%), Postives = 233/365 (63.84%), Query Frame = 0
Query:    9 RVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIK---NPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAM 370
            RV  DAP +   + S          + ++  +++ +K+       ++E+ FDL+GVDA+IANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P     E+ EAT+ NT VFKL++    +P +P D     P  A +++       ++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P V L E++ G +A+ LV +C + +FDIED+G G   A V   R CTMCR CIREP W++K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL +KC+  +         VD DE M
Sbjct:    9 RVGQDAPHQSESSYS----------FVEQSKRQVKVKIQSL---TDDEIVFDLIGVDAAIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLIPLNVDPREFQAFPD---NEEAEATDENTIVFKLDVTCKFDPEHPKD-----PTKAIHSS-------VYSRDLEWVPQGNQEERF---GSIRPVHEDILMAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPKVELMEKVEGTDAKRLVEECQIGLFDIEDIG-GVPTAVVKDQRACTMCRNCIREPSWNEKIRLGRQSDHFIFSVESVGMIKPE----------ELLLEALNVLAEKCNVALESFTQ----VDEDEEM 327          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPF8_ECTSI1.450e-19976.34DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A6H5JLW5_9PHAE1.380e-16768.72DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A7S2RJI0_9STRA1.420e-10448.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024TZC9_9STRA2.240e-10349.05DNA-directed RNA polymerases I and III subunit RPA... [more]
W4GC85_9STRA5.660e-10253.11DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A6G0XIR3_9STRA8.180e-10247.79DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A662X4Y9_9STRA8.950e-10150.00DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A5D6XHD4_9STRA1.230e-10052.35DNA-directed RNA polymerases I and III subunit RPA... [more]
K3X7N1_GLOUD1.020e-9849.41DNA-directed RNA polymerases I and III subunit RPA... [more]
D0NVB2_PHYIT1.690e-9847.12DNA-directed RNA polymerases I and III subunit RPA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 56..356
e-value: 5.2E-78
score: 275.1
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 59..350
e-value: 2.9E-17
score: 62.7
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 82..229
e-value: 1.1E-98
score: 332.0
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 82..233
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 88..232
e-value: 1.7E-22
score: 79.9
NoneNo IPR availableGENE3D3.30.1360.270coord: 50..349
e-value: 1.1E-98
score: 332.0
NoneNo IPR availablePANTHERPTHR11800DNA-DIRECTED RNA POLYMERASEcoord: 48..357
IPR033901DNA-directed RNA polymerases I and III subunit AC40PANTHERPTHR11800:SF13DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1coord: 48..357
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved sitePROSITEPS00446RNA_POL_D_30KDcoord: 70..110
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 51..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4838contigH-paniculata_contig4838:2968..12352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4838.11948.1mRNA_H-paniculata_contig4838.11948.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4838 2456..12521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4838.11948.1 ID=prot_H-paniculata_contig4838.11948.1|Name=mRNA_H-paniculata_contig4838.11948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=372bp
MLGRVTKYRVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCG
REDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDE
ILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNP
ADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVH
DDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEE
IVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGW
SDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKC
DTLISEVEAYEIGVDFDEAMP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR036643RNApol_insert_sf
IPR011262DNA-dir_RNA_pol_insert
IPR033901RNAPI/II_AC40
IPR001514DNA-dir_RNA_pol_30-40kDasu_CS
IPR036603RBP11-like