mRNA_H-paniculata_contig4838.11948.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig4838.11948.1
Unique Name	mRNA_H-paniculata_contig4838.11948.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 1.890e-195
Identity = 284/372 (76.34%), Postives = 312/372 (83.87%), Query Frame = 2

Query:  170 MLGRVTKYRVNNDAPSEVFDADSPEDRADRHL-PYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAMP 1282
            MLGRVTKYRV NDAPSEVF+A S ++R DR L  Y +RV K LD+K    G    NEL FDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMA+P  FEF+ + + GE +E TEFNTCVFKLE+KNP +PADMP+PMP G SYAAGPRRT+N+F    +WC HG+Q  RF  +GGL PVHDDIL+AKLRPGQEI  EMHCRKG+GKDHAKFSPVATASYRLLPVV+LKEE+ G+EAEELV KCPLNVFDIEDLG   KRAKVARPRDCTMCRECIREPGWSDKVSLSR ADHFIF IESVGML PK          +LLKDSIQVLRQKCD++I+EVEA+E GVDFDEAMP
Sbjct:    1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVQSGGGHTNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGE-EGGEQDEPTEFNTCVFKLEVKNPADPADMPDPMPTGTSYAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPK----------ELLKDSIQVLRQKCDSMIAEVEAFESGVDFDEAMP 361

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 1.350e-163
Identity = 257/374 (68.72%), Postives = 286/374 (76.47%), Query Frame = 2

Query:  170 MLGRVTKYRVNNDAPSEVFDADSPEDRADRHL-PYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCV-FKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGG-KWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAMP 1282
            MLGRVTKYRV NDAPSEVF+A S ++R DR L  Y +RV K LD+K    G   +NEL FDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMA+P  FEF+   + GE +EAT+    V  +   + P  P     P   G     G        + G  +WC HG+Q  RF  +GGL PVHDDIL+AKLRPGQEI  EMHCRKG+GKDHAKFSPVATASYRLLPVV+LK+E+ G+EAEELV KCPLNVFDIEDLG   KRAKVARPRDCTMCRECIREPGWSDKVSLSR ADHFIF IESVGML PK          +LLKDSIQVLRQKCD++I+EVEA+E G+DFDEAMP
Sbjct:    1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVRSGGGHKNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGD-EGGEQDEATDGVQHVRVQAGGEKPGGPGGHAGPYADGYELCGGAATDHERLQVGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKQEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPK----------ELLKDSIQVLRQKCDSMIAEVEAFESGIDFDEAMP 363

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A7S2RJI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJI0_9STRA)

HSP 1 Score: 320 bits (821), Expect = 2.590e-101
Identity = 173/359 (48.19%), Postives = 238/359 (66.30%), Query Frame = 2

Query:  182 VTKYRVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIG 1258
            + +Y+V N   SE F   S    A  H P+  R+ + + ++V +     E EL FDL+GVDAS+ANALRRI+LAEV T+AIE+VY+ MNS +IHDE+LAHRLGL+PI  DP  F    K K  +DE     NT VF L+++   + AD     P G++       T++++ +  +W    +Q   F +  G+ PVH+DIL+AKLRPGQ I  E HC++GVGKDHAKFSPVATASYRLLP + + +E+ GE AE+L   CP+NVFDIEDLG G++RA  ARPRDCTMCRECIR+ GW ++V L R ADH+IF +E+VGML+P+           ++K++I++LR+KC   + E++    G
Sbjct:    9 IRRYQVKNQGVSEEFQPVSAAADASVHRPFSDRLLEGMRIEVME---SSEEELVFDLIGVDASVANALRRIMLAEVPTMAIEYVYIEMNSGMIHDEVLAHRLGLVPIQVDPRLF----KDKVPQDE-INSKNTVVFGLDVQCSRS-ADT---RPPGSTEPY----TMSVYSKHLQWLPQADQAEEFPD--GIRPVHEDILLAKLRPGQHIKLEAHCQRGVGKDHAKFSPVATASYRLLPDIVVADEVKGETAEQLKAMCPMNVFDIEDLG-GERRATAARPRDCTMCRECIRQEGWDERVKLYRAADHYIFKVEAVGMLAPR----------DIVKEAIRILREKCTDFLGELQGDPAG 338

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A024TZC9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZC9_9STRA)

HSP 1 Score: 316 bits (810), Expect = 5.570e-100
Identity = 180/367 (49.05%), Postives = 234/367 (63.76%), Query Frame = 2

Query:  197 VNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGV------DFDEAM 1279
            V  DAP  V D +S    A     +     K+L +K+       ++E+ FDL+G+DASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P+ + GE   AT+ NT VFKL++    +P+D PN + K  +         +++ R  +W   G QE RF   G + PV +DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRLLP ++    +VG +A+ L   CP+NVFDIEDL      A  ARPR+CTMCRECIR PGWSDKV + R +DHFIF +E+VGML P+           LL ++I+VL  KCD  +  + A +  +      D D+AM
Sbjct:    8 VGLDAPH-VPDTESESSHA-----FVDNFKKQLKVKIQSL---TDDEIVFDLIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEHEEGE---ATDENTLVFKLDVTCTADPSD-PNDISKATN--------ASVYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPEITFPAPVVGADAKTLQKTCPMNVFDIEDLA-----AVAARPRNCTMCRECIRAPGWSDKVKMGRVSDHFIFSVETVGMLPPE----------DLLPEAIKVLVAKCDVAVESLNAVDDELRENADEDEDDAM 335

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: W4GC85_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GC85_9STRA)

HSP 1 Score: 313 bits (802), Expect = 9.650e-99
Identity = 171/322 (53.11%), Postives = 212/322 (65.84%), Query Frame = 2

Query:  287 KRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYE 1252
            K   +K+     ED   + FDLVG+DASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P+ + GE   AT+ NT VFKL++    +P D     P   S A       +++ R  +W   G QE RF   G + PV +DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRLLP +S    +VG +A+ L   CP+NVFDIEDL      A  ARPR+CTMCRECIR PGWSDKV L R +DHFIF +E+VGML P+           LL ++I+VL  KCD  +  + A +
Sbjct:   32 KHFKVKIQSLSDED---IVFDLVGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEHEEGE---ATDENTLVFKLDVTCTADPND-----PADISKAT----NASVYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPEISFPAPVVGADAKTLQKTCPMNVFDIEDLA-----AVAARPRNCTMCRECIRAPGWSDKVKLGRVSDHFIFSVETVGMLRPE----------DLLPEAIKVLVAKCDVAVESLNAVD 320

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A6G0XIR3_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIR3_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.380e-98
Identity = 173/362 (47.79%), Postives = 226/362 (62.43%), Query Frame = 2

Query:  194 RVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAM 1279
            R+  DAP        P+   +    +     K+  +K+     ED   + FD++G+DASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLIP+  DP +F+  P+ + GE   AT+ NT VFKL++    +P D P+ + K  + +        I+ R  +W   G QE RF   G + PV +DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRLLP +     + G +A+ L   CP+NVFDIED+      A  ARPR+CTMCRECIR PGWSDKV L R +DHFIF +E+VGML P+           LL ++++VL  KCD  +  + A +  +  DE M
Sbjct:    7 RIGTDAPH------VPDTEIETSHAFVDNFKKQFKVKIQSLTEED---IVFDVIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPELEEGE---ATDENTLVFKLDVTCTADPDD-PDDISKATNSS--------IYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPDIQFPAPVTGADAKTLQKTCPMNVFDIEDMA-----AVAARPRNCTMCRECIRAPGWSDKVELGRVSDHFIFSVETVGMLPPE----------DLLPEALKVLMTKCDVAVESLNAMDDELAEDETM 329

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A662X4Y9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Y9_9STRA)

HSP 1 Score: 311 bits (796), Expect = 1.050e-97
Identity = 173/346 (50.00%), Postives = 225/346 (65.03%), Query Frame = 2

Query:  194 RVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLI 1231
            RV  DAP  V +A + E      +   +R  K     + D      +E+ FDL+GVDASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +PA      PK  S A       +++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P V L E + G++A+ LV +C + +FDIED+G G   A V   R CTMCR CIREPGW++K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL +KC+  +
Sbjct:   11 RVGQDAPHVVRNAAAFESLGSDFVEQSKRQVKVKIQSLTD------DEIQFDLMGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLRVDPREFQAFPD---HEEAEATDENTIVFKLDVTCAYDPAH-----PKDLSKAV----HASVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELTEAVEGDDAKRLVEECQMGLFDIEDMG-GVPTAVVKDQRACTMCRNCIREPGWNEKIRLGRQSDHFIFSVESVGMIKPE----------ELLPEALNVLMEKCNVAL 324

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.440e-97
Identity = 167/319 (52.35%), Postives = 216/319 (67.71%), Query Frame = 2

Query:  269 YPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVV-KCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCD 1222
            Y +++ K++ +K+     E   E+ FDL+GVDASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +PA      P+ A+ A       +++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P + L + + G +A +LV  KC L VFDIEDLG  D  A V   R C MCRECIREPGW +K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL  KC+
Sbjct:   30 YVEQLKKQVKVKIQSLSEE---EIVFDLIGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPREFQAFPD---NEEAEATDENTIVFKLDVTCRFDPAH-----PQDAAKAL----HTSVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHIELAQPVTGADARQLVADKCALGVFDIEDLGGVDT-AVVKDARSCNMCRECIREPGWDEKIKLGRVSDHFIFSVESVGMIKPE----------ELLPEALNVLVDKCN 319

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BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: K3X7N1_GLOUD (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7N1_GLOUD)

HSP 1 Score: 305 bits (781), Expect = 1.610e-95
Identity = 167/338 (49.41%), Postives = 226/338 (66.86%), Query Frame = 2

Query:  269 YPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVK-CPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLI---SEVEAYEIGVDFD 1270
            Y +++ K++ +K+       ++E+ FDL+G+DASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +PA  PN + K            +++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKGVGKDHAKFSPVATASYRL+P V LK+++ G +A++LV   C   +FDIED+G G   A V   R C+MCR CIREPGW +K+ L R +DHFIF +ESVGM+ P+          +LL +++ VL  KC+  +   ++VE  E+  D D
Sbjct:   30 YVEQLKKQVKVKIQSL---TDDEIVFDLIGIDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPREFQAFPD---HEEAEATDENTIVFKLDVTCKYDPAH-PNDLSKALH--------TSVYSRDLEWVPQGNQEERF---GSIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELKQKVTGADAKKLVEDVCNAGLFDIEDIG-GVPTAFVKDSRTCSMCRNCIREPGWEEKIQLGRISDHFIFSVESVGMIKPE----------ELLPEALNVLVDKCNLALESFNQVEDEEMEGDED 338

[Close]

BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Match: H3GV90_PHYRM (DNA-directed RNA polymerases I and III subunit RPAC1 n=20 Tax=Phytophthora TaxID=4783 RepID=H3GV90_PHYRM)

HSP 1 Score: 306 bits (783), Expect = 2.180e-95
Identity = 176/395 (44.56%), Postives = 244/395 (61.77%), Query Frame = 2

Query:  116 WVAVCVDAGLGR*HILEEMLGRVTK----YRVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCGREDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIK---NPVNPADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVHDDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEEIVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGWSDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKCDTLISEVEAYEIGVDFDEAM 1279
            + AV +   L   H L +   R+ K     RV  DAP +      P+  ++    + ++  +++ +K+       ++E+ FDL+GVDA+IANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  DP +F+  P     E+ EAT+ NT VFKL++    +P +P D     P  A +++       ++ R  +W   GNQE RF   G + PVH+DIL+AKLRPGQ I+ E HCRKG+GKDHAKFSPVATASYRL+P V   E++ G +A+ LV  C + +FDIED+G G   A V   R CTMCR CIREPGW++K+ L R +DHFIF +ESVGM+  +          +LL +++ VL +KC+  +         VD DE M
Sbjct:   12 FAAVSIGPSLDNRHPLLQDRDRMVKTSKVIRVGQDAPHQ------PDVESESSYSFVEQSKRQVKVKIQSL---TDDEIVFDLIGVDAAIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLKVDPREFQAFPD---NEEAEATDENTIVFKLDVTCKYDPEHPKD-----PTKAIHSS-------VYSRDLEWVPQGNQEERF---GSIRPVHEDILIAKLRPGQSIALEAHCRKGLGKDHAKFSPVATASYRLMPKVEFTEKVEGADAKHLVEDCQMGLFDIEDIG-GVPTAVVKDQRACTMCRNCIREPGWNEKIRLGRQSDHFIFSVESVGMMKAE----------ELLPEALGVLAEKCNIALESFTQ----VDEDEEM 364

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4838.11948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPF8_ECTSI	1.890e-195	76.34	DNA-directed RNA polymerases I and III subunit RPA...	[more]
A0A6H5JLW5_9PHAE	1.350e-163	68.72	DNA-directed RNA polymerases I and III subunit RPA...	[more]
A0A7S2RJI0_9STRA	2.590e-101	48.19	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A024TZC9_9STRA	5.570e-100	49.05	DNA-directed RNA polymerases I and III subunit RPA...	[more]
W4GC85_9STRA	9.650e-99	53.11	DNA-directed RNA polymerases I and III subunit RPA...	[more]
A0A6G0XIR3_9STRA	1.380e-98	47.79	DNA-directed RNA polymerases I and III subunit RPA...	[more]
A0A662X4Y9_9STRA	1.050e-97	50.00	DNA-directed RNA polymerases I and III subunit RPA...	[more]
A0A5D6XHD4_9STRA	1.440e-97	52.35	DNA-directed RNA polymerases I and III subunit RPA...	[more]
K3X7N1_GLOUD	1.610e-95	49.41	DNA-directed RNA polymerases I and III subunit RPA...	[more]
H3GV90_PHYRM	2.180e-95	44.56	DNA-directed RNA polymerases I and III subunit RPA...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4838	contig	H-paniculata_contig4838:2456..12521 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	564.7
Seed ortholog evalue	3.2e-158
Seed eggNOG ortholog	2880.D7FPF8
Preferred name	POLR1C
KEGG rclass	RC00055,RC00523,RC02795
KEGG ko	ko:K03027,ko:K08059,ko:K13196,ko:K14163,ko:K18715
KEGG TC	1.I.1
KEGG Reaction	R00435,R00441,R00442,R00443,R03661,R05578
KEGG Pathway	ko00230,ko00240,ko00860,ko00970,ko01100,ko01110,ko01120,ko03020,ko04612,ko04623,ko05169,map00230,map00240,map00860,map00970,map01100,map01110,map01120,map03020,map04612,map04623,map05169
KEGG Module	M00121,M00181,M00182,M00359
Hectar predicted targeting category	other localisation
GOs	GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015074,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032196,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070893,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.	transcription by RNA polymerase I
EggNOG OGs	COG0202@1,KOG1521@2759
Ec32 ortholog description	DNA-directed RNA polymerase, insert domain
Ec32 ortholog	Ec-14_004750.1
EC	6.1.1.15,6.1.1.17
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	br01611,ko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03021,ko03041
Exons	8
Model size	1797
Cds size	1116
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4838.11948.1	prot_H-paniculata_contig4838.11948.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig4838 2968..12352 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930432.9905603-UTR-H-paniculata_contig4838:2455..2967	1622930432.9905603-UTR-H-paniculata_contig4838:2455..2967	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4838 2456..2967 -
1691481290.0904064-UTR-H-paniculata_contig4838:2455..2967	1691481290.0904064-UTR-H-paniculata_contig4838:2455..2967	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4838 2456..2967 -
1622930433.140206-UTR-H-paniculata_contig4838:12352..12521	1622930433.140206-UTR-H-paniculata_contig4838:12352..12521	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4838 12353..12521 -
1691481290.1652904-UTR-H-paniculata_contig4838:12352..12521	1691481290.1652904-UTR-H-paniculata_contig4838:12352..12521	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4838 12353..12521 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig4838:2456..12521-
coding sequence from alignment at H-paniculata_contig4838:2456..12521-

protein sequence of mRNA_H-paniculata_contig4838.11948.1

>prot_H-paniculata_contig4838.11948.1 ID=prot_H-paniculata_contig4838.11948.1|Name=mRNA_H-paniculata_contig4838.11948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=372bp
MLGRVTKYRVNNDAPSEVFDADSPEDRADRHLPYPQRVAKRLDLKVADCG
REDENELAFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDE
ILAHRLGLIPIMADPHQFEFMPKPKPGEDEEATEFNTCVFKLEIKNPVNP
ADMPNPMPKGASYAAGPRRTLNIFRRGGKWCSHGNQESRFMEQGGLMPVH
DDILVAKLRPGQEISCEMHCRKGVGKDHAKFSPVATASYRLLPVVSLKEE
IVGEEAEELVVKCPLNVFDIEDLGDGDKRAKVARPRDCTMCRECIREPGW
SDKVSLSRTADHFIFDIESVGMLSPKASFCPLQSSAQLLKDSIQVLRQKC
DTLISEVEAYEIGVDFDEAMP*

mRNA from alignment at H-paniculata_contig4838:2456..12521-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig4838.11948.1 ID=mRNA_H-paniculata_contig4838.11948.1|Name=mRNA_H-paniculata_contig4838.11948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10066bp|location=Sequence derived from alignment at H-paniculata_contig4838:2456..12521- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTACAACTGTACTGACTGTACTGCTACTCTACCCAGGTTCTCTCCAAGTC
AGAGAAACAACGGCAATACAGGAGCTTCCAGGGAAAGAGTTAATACCGGA
GAGCTGCGCTGGCAGTGGGTAGCTGTCTGCGTTGATGCTGGTTTGGGAAG
GTGACATATTCTCGAAGAGATGCTGGGTAGAGTCACAAAATACAGGGTAA
ACAACGATGCTCCGTCGGAGGTGTTTGACGCAGACAGCCCGGAAGATCGC
GCGGTGAGTGATTTAGAGTCATCATATGGAGCGGGTGTCTTGTGTTTTGC
TTGTTGATGCACTCTGCTTTTGCCTCCTTGGCCTGCTAGCCTCTTTTGTG
AGCGTTGGTTTTGTGGCTTGCTGGGTGCTGTGTTGTTTGGACGGGATTGT
GATACTTTGATGTTGAGTGGCTCCGAACCGCATCCCAAACACTGATCGAT
ACTTTGTACAAAGCTGCGCCATCTTGTTTGTCGTATTGGAAGATGCCTCT
AAGTGCCAACAAGCTCAATATCAATAGTCATAACATCAGCTTTCAGCTAA
AGAGACGGAAAGTCGTATCATCTAGCTTAGCAGCCGGCTGAACGATCTGC
TGCTGCAGTGGAATATCCTGCAAAATATTAGCATCTGAATTTTCGCATGT
GACGAACATATTCCCCATACCTGCGGCGGGTTTACTTCATCGCTGATAAC
AAAATAAATGTGCTAGTTCGAAGAGGATCAGGGTTGTGTGTCAGACTAGT
AAATGCAGAACAGACAAAATGTTTAATCTCTCCGTATTCACTGATATCAC
TTAAATGTACAGTGTATCTACCTCTACAGACATGTGCTAGGAGAGGCGCA
CTATCTGTGTGAGTTGGGGGTCGAGGACCTTTTGACAAACAGGACACCTA
AACACCCGGAGCGAATATGAAAAATGGAAAACTTGAAGAAAAACAAGTGC
ACAGACGGGACGGCGAAGCCAAATAACCGTGAGTCTTGTTCATGAAACTG
CTTCGGAGTTCTGGGGAGTTTTCAACCAGTCAAAGACCCAGAAAGTGATA
TGAACGAAAGTCCCTCCGAAGCAGTGTCATTAGAAACGACCAATCAACGT
CCTTCCTGAAACCGGTGCATCGACCCAAGCCAACCAGCATGGTGTAAAAG
GCAGAGCTACTGACCCATCTATGGAAAATAACTTTTCGTTCTGCATGTAC
AGTGAGTACATTCAGCAGAAAATCTATTTGAACGCGATCTGAACACCATT
TGAACGCGGCCACCGCCAGTGTCGCAGGCCAGGGCAGCTGAGACTGGAGT
ACATATATTACGTTCCTCGAGCAGTTTTATTGAGCTGCTTAGCGTAAACA
GCACGGCGTCGTAGACTTCCGCCCAGTGGCAAAATATACAGACTGTAGTA
CCGCATGCAGTGCGGGCAACTGGGGTTTACTGTGTATGCAACACCATTTA
TACGGTGGTAGATATTGTGAGTGAGCAGACCTTGAGAACACAGTAAATCC
AAGCACACCACTTAACATGGAGAAACACATTCAATCTCCCTTTTTGTTGT
CTTGGCTGGTCCTCATGACAAATCGAGTTTGGGGTAAAAACCGTGAGGGA
ATGAATGCTCTTTGATCTTGCCCACAAACGTTGTCAGTGGGGGTCTCCAG
TGCGGAATATGATTTTTGAAACTGGGGTTGGCTTCATTGTGAAGTAAATC
CCCTCGTCTCGAGCGATTAGGCTGGCACTATTGTGATAAAATGCGCTTAG
ATCGCGCTCATGGACATGGCCACCGATGTCATGGAGGTAGATAAGCGCTC
GTTGAATTCGGGCTTCAACCTCTCTAATCTCCGGAGAGTCGCCTACGGCG
TGCGGGACGGAGAAGGGGGCAATTGAAATTAATTAAAATCCTCGATCCAC
TACATTAAAAAATTGCCCTCGCTGACAGGACAGTGTATGCACCGTTTGTG
GTTCTGTTGTGACAACTCCGGGCGCGGAGCAGGTACTGGGAAGAGAAGGC
GTGATGGGAAGAAATATTTATGTCAGGGTCGAATCCCGACTCTCGAGCGG
TTTGGAACCGTATCGTCGAGTGTAGCATAGCATGTCAGAGGCCATTGTCC
CACGAAGCAAGGCGGATTAGCCCGCAGCTTCTCCTTGCGTGCATTTCCGA
TCCAAGGATCTAACGAACGGCTAGTGCTGGAATCTCATCTTCAGGTCGTC
GCTACGACACACCACACAGCGGGCGCGAAGAACCTAAATCGCTGGCTCAA
CACTTGATATTACGCACAAAAAAATGGCAAGTCGATTTAACGCCCTAGTG
TGACGTGTGTCGCAAGACACGTTGAGTCACGTGTGACAAAGTAAAACATG
CTGCTTCGCACCCGATATCACAGTAATTTCATCTAAGCTGGTTTCAGGTT
TCGGTCTTCAATCGCTGCCACAGCAATCGCCAAGCAGGCACTGAGAAGAG
GAACGGGTCGCGAGCGTGTCGTTGTGTCTGGCGCTCGAAACTCAGGGACT
CAGGTGGCAATAAGCGTTGCGAACAGACAAGGTTTCTCTCGTGATCGGTC
CCAGAAACTGGACCGTGCAAATTTGTGATTTTGTCATGGTCCGGTGAGGA
AGGTACAACCTCGCTTCGGTACATGGGCTTCACTCGTGATAAATGAACTG
TCGGCAGTCGACAACCGTTTGTGACTGGGGAGGTGATAGACCACATGCAA
CATTCCGTTCGTGTATGAGGCCAGACAGTTATACGTATCTACAGTGAATT
TCACACAAACCGTGTGGCGAGCTGCTACACGTTTTCCCGATCGTTGGCAC
CATTTTCCACGGCTTGTCACATGACTGGCACTCGATCATACGAACAACTG
CAAGCCGGCCGAAAAAGAGAAACATTCGCGTGATCGATGGTGAACCAGGC
AAATTGTCAAATAATCAACCGCGAATCGGCCGGAAAAGGTAAAAATCACT
CATAACCAATCGCGAGTCGGGCAAATTCTCACATGACCAACCGCAAACCG
GGTAAAATATTACATGACCAATCGCGAACCGGTCCGGGGACCTTCATGAT
GTGGACAAGACATGTATAACACACCCTGCACCCCGCATCGTAATTACATA
CACCGAACGGTGAGGGAAAATCTCAACACCTGATATAAATATGCCGAACC
GCCAGAAAAATGACAAGAACCGACGCTTTATTTTCGGAAATGGAACGAGT
TGTCCCGAACTATCACGTATTGCGCCAACAGCTGACCTACCTTTGGCCAA
CTGGCAAATATGGTTACATAACATTCGTTCAGGAACAGACAGTTATACGA
CCAGCACCCTCTCACGTGACCATATGTGAAAAGTATTGTCTTAATCAATT
TTCGCTGACGAAACGTTTTGAACAGAGGTCAGGAAAAGGTTTCACGTTCT
GTAGCTTCTTCATGAAACGATCGGCAGCAGGTACAGCGGTGACGACCTGC
GTACTCCGCTTATTATACTTGTATGCCGCACCGGCGGGTGTGTGTGTGTT
GTGTAGGTTTGAAAGCAAGTGGTACCCTTTTTATTGATGTGCACAAATCC
CATGAAACGGCGGGAGGTTCAGATCAGTGGAATTTTTCGTTCCTTTAAAG
GTGAAGGTAAAGCTTGATCTAACATGCGAGGAGAGAATCAACGTGCGTAC
ACGTGTAGAAGTCACGCAGTAGTACGGGATGCAGTGCATCTACCCAAAAA
ATGTCAACTGTTTTTACTCTTGTATTTTGTCATCCTTGTGAACCCAGTGC
GGCCTGGAAGAACGTTCGCGCTTTGTTGGGGACGCAGAGAGAGAGAGAGA
GCGACATACGCTGCTTCGTAAAGTACCTTTCGGAGTTGCCTAGTTGCTCT
TCCCCTTAGAACATGCCTCACTTTCTCTACCTGTACGCCCTTGGTATTTT
GTCGTGCGCGCGGCTTCTCAGGATCGACACCTACCCTATCCGCAACGCGT
TGCGAAGAGGCTAGATCTCAAGGTTGCGGACTGTGGAAGGGAAGACGAGA
ATGAATTGGCGTTTGATCTCGTCGGGGTGGACGCGTCTATTGCCAACGCT
TTGCGAAGGATATTACTGGCCGAGGTAACGTTTTGTTCGTGTGTTTACAG
CATATCTGCGTACTTTGTATTACGGAATGATGGTAATTACCGAGAGAGCG
AGGGTTGGAAGTGAGGATAACCAGAGGCAAGCGGAGGTGCGACTATTTTT
GTGTGGTTTGCTGATGTTCATTTCTTTTCAAGAAGGTTGTGATTCTGACC
GATCTTGCTTTTACACATGGTACGATAAGCATTGAACAACTGGTTCATCA
GGACGCACTTGTTGTTGAGACGCAGCATTGCCTTTTTTTGTTCAGGCATG
TGATGGTGGGTAGAGCTGAATCTCTTCTCTCACTCTCTCTTTTCTTATCT
CCATGACTCAGTGTTTCCTACTTACGTTAATGGTTTCGTAAGAGAGAGAT
AGAGATGTGGCATTTTATTGCATGCGGTAATTCTATGTTGTCTGCGATGA
AATAGCAACAACAGCTCTCGTTGCGGATTTACGGTGGTGGGGGGCTAACC
GCGATATAAGAGCCTTCTAAAAGGACTGACTCCCATGGCAACTTTCACTT
TTTTCTTGGCTGTTCTCCCCTGACGGATCTTGAAATGAAACGGGAGGAGG
GTGCCTGCGTGCCTACTATGTACAGCCAGATTCCTCGATAGTTACAGTTC
ATTGCATTTTGGTCCAGCCTCCGAACGCAAAGAGAAAACTCAAGGAACAG
GTTCACGTGGTGACTTCCGCATGTTCAAGGAGACGAAAGTAACACATACC
TAGTACAGAACACCCAACCTACATAGTAGGCACGCAGGCACCCTATTCCC
GTTTCATTTCAAGATCCGTCAGGGGAGAACAGCCAAGAAAAAAGTGAAAG
TTGCCATGGGAGTAAGTCCTTTTAGAAGGCTCTTATATCGCGGTTAGCCC
CCCACCACCGTACATACGCAACGAGAGCTGTTGTTGCTATTTCGTCGCAA
ACATGGAATTACCGCATGTAATAAAATGCCACATCTCTCTCTCTCTTTCT
CTTACGAAACCATTGACGTAAGTAGGAAACACTGAGTGATGGAGATACTG
AAGAGAAACATGCAGTAAGATCAGAGGAGGGGAGGGGAGGGGGGGCTCTT
CATACAACGTGTCGAGGTAGAGCCTAGCAAGAAATAGATGAGATGATTAG
ATGTTAACGCGGAGGGTGGCCACAAGGAACCGAGGGAAAAGCCTTGTGGA
CTTGCTCTCCACGTACGCGGTCATGTTGCAGATAAGTACACTTTCGCACC
CGGAGCATGCACAGCGGGCCAAGGCTCTGTCCTCATCAGGGTACGTTTCA
GATCCAGTGGTGGTCAGTCTCGAAACAGGTTAATGGATTTTCAGGTTTAC
CTCGTGGTTTTCAGGGTAGAAGCGTCCGCCAACAAACCAAGCTGTGTAGT
ATATACTGTGCGACACGGAAATGATCACAAGATCATGGCATAGGTTCAAA
AACGCCTGTTTCATATACATGCATACATGTGATGATCAATGATTTTCGTA
TGATTTGACACAGGTGGCGACCGTAGCTATCGAGCACGTCTACATGTTCA
TGAACTCTTCCATTATTCACGACGAGATCCTCGCACACCGATTGGGCTTG
ATTCCCATCATGGCCGACCCTCATCAGTTCGAGTTTATGCCGAAGCCCAA
GCCTGGTGAAGACGAGGTGAGAGCATGCCGTGCCACCGCTAGCTGTATAT
TTGTGAACGATTTGAGTGATCGGTCACATCAAGGCTACTCAGTTACACGT
CGAGTTGGCTTTCGTGGCGTTTCCTTTTTTCCTTCTTCAATGTGTGTATT
TCTCACGACGCTGCCAATTGAATCGGATACGACAGTATAACGCATGCGTT
GCGTGCACCGGCAATCGTTTATCTGATTTTCGTTGGTGGTTGAATCAACA
GTGCAGGTACGGTTGTGAATTGCTTGACTTCATAGCTGAAACGCCAAACT
GGTTATGTTATGTACGTGGGCAGAGCTGACCATGAAACTGTAACCCCTTC
CCAGTCGCCGAGGGAGCCGCTATGTACAGTATGATCCACGTCAGCTACAG
CAATCACGAGGAGCCTGATGCTGGTTTGTTAGACAGGAAGGAAACGAGTT
AGCATCCAACGGTAAAACATGGCTGCTCGGCATGATAGCAAATATGTTGT
TGGCTTGTACGGTCCCACTTCTTGGCTGTCGCCACCACCACAGCCAGGAA
TGGACAAAGACGAATGCAATGCACGTTGTTCCTACGTTGCCTTCCTTAAT
AAAAACTGGAGGTGGGGATCTTATTTGTCATGCTAAAATAAGGACAGGGC
CTTCGTGACTGAGACGTCCTGGGCTACGATTTACCCCCGCGTGATGGCCG
AGTATTCCCAGCACTCGAGAGCAATTAGTCTACCCAACATATTGACATGT
TTCTAGCACACGTTGGTTGGAGAGCCTAGTAGGACAACATCGACGTTTTC
TGTGTTATCTCGCTTCTCTGGGCTGCCAAAGCACACGTTCATCCGGCTTC
AGGACGATGGGCTTGCGACGGTACCTTTACACCTGCCAAACCAAACGCTG
TGGGTGTTTCATACTCAGGTACAAGATGGTTCCACCAAGAACCATGAGAT
TCATGCACTAATCTTTTGCTTCTCGGTTCCTACGATTTATGAAAACAAAA
ATATTGATTTGCGTATGAACAATACAAATTAACCTCCGTCTGCTTTTGCT
CTTGTGTCTCTGGTGTCGAGATAGGAGTACCCCGAATCCAGGATTTGTAC
TGCTCGAGCCTAGATTTCAGACAAAATATCCTCATTGGACCCAAGCAAAC
GTCAAATCCTGGGAACTCTGTCAGTTCGATTGAAACGTCGACGTGTTCCT
TCAATGTCACCTAATAAAAAGGCTCATTACTGTTACATGGCATAACTCGT
CGTTTGATATTTATACCCAAACCAACTTTTCGGTCTAATTCATGTCAGGT
TAAAGTGCTCCTGTTTCGCTCCTTTTTTTTCTGTTGCATGATTTTTTGAG
CTCCGAAACAAAAGGAACACGTTTGCGCATGACTAAGGCGAACAATAAAT
ACTTCGCTGGCTCCTTTTACTTTTCCGATAGTAAAAAAAACGCGACGATG
TAGGGTTTCGGTATTTCTCCATTTCGATAGATTCCAATTATCTGGATACC
AGAAGCAGAAAAAAAGAGCCAGCGTACAGTTGGTCGTCTCGTTCATGCGC
AAATAATGTATAGTTTTGTTTCAACAACGCGTAAAAGCGATGGAGCAATT
GCTTTTCGAGGCAATCTGATCCCTTGTGCTGGAACCAGCCTCTAGCCGCG
ATGTACTCCTCCTCTTCGGTGTTTGGTTTAGATTGTGATGGTGAACAGCT
TCAGACACAAAGTGAACTAGTGTCAACTTAAGTATCTACGTCAACGATTC
AACCAACTTGTGTCTGTCTCTACACGCTCTCCAGGAGGCGACGGAGTTCA
ACACGTGTGTCTTCAAGCTGGAAATCAAGAACCCTGTGAACCCCGCGGAT
ATGCCCAACCCGATGCCTAAGGGAGCGAGTTACGCCGCCGGGCCTCGACG
CACTTTAAATATTTTCAGGCGAGGAGGCAAGGTGGATCGACTTGTTGTTG
ATGGCCTGACGAGGCAGAGCGAGTATGACGGCAATATTCAGGAGGTTGGG
ACCTTGTTGGACTGGCGCAGAAGCTCCCCCGATGAAAACAACTCGTGCTC
GTTGCCGACATATGTGGGTTTGAAGTGGGCATCACACCCAGACGCCCTTA
TGTTCTGCTTCCACAATTACACACTTGCGACTGCTGCTGCTGCTGCTGCT
GCTGCTCATGCGATTTTTCCTTCTTAATTCAGTGGCGCGTTCGAGTGGTG
TAGTCACGGCAACCAGGAGAGTCGATTTATGGAGCAGGGGGGACTAATGC
CTGTACACGATGACATTCTGGTCGCTAAGCTTCGGCCTGGGCAAGAAATT
TCTTGTGAGGTAATATCAAAACGATGGTTGCTTCATGCATGATCTTATTT
CATGTATAGGGCAAAGAGAATCGTTTTTTGGTTGTTGTTCGCGCAGCTGT
GATATCGCTTCCTATGCATGTTTTGTTAGAAATCATCCGAGATATGTGTG
GAAGAAAAGATTGGTGTTATCCCGCCTTTGATGAGTTGATTAGACGCTCA
CCGCTCACCCTGTACCCGAATTTCCGAACGTGGGATTACTCTTGCGTGCT
GCGCGCGTGCGTTGGGCTGCCCTCATCCAGATGCACTGCCGCAAAGGTGT
CGGAAAAGACCACGCTAAGTTTTCCCCTGTGGCTACGGCGAGCTACCGCC
TTCTACCGGTGGTGTCCCTTAAGGAGGAGATTGTAGGGGAAGAAGCAGAG
GAATTGGTGGTCAAGTGCCCATTAAACGTGTTCGATATCGAGGACTTGGG
GGATGGCGACAAAAGGGCGAAGGTGTTGAAAAAACCACAGTGACCATCTA
CCGTTCTTTTCATGACCTTAACGTGTCGATCTTCTATTTGTGTTCATATC
GTTTATCCTGGGCACTTCGGTGCAGCCCGGGCCTCCCCCAGTACTTCATG
TCGTATTCCATGATGCTGATGAAGTTTCCATACATGCTACGGGCAAGTTA
GTCGCTGTACTGTAACGGACTCATTTGCCTTGTGCATCGTGGTAATTTCC
CTACTAGGGTTCGAAAGGTGTCACCCCTTTTCCAGTGTACTATGTACCCG
CCATCTTATGAGTTGGGGTTGGGGTTGTTCTTAACCTCTGCCCTTCCCCC
AACGTAACTCCTCACGCCGCCTTGAATTCCGTAGGTGGCGCGTCCACGAG
ATTGCACCATGTGTCGAGAGTGCATCCGTGAGCCGGGATGGAGTGATAAA
GTTTCGTTGTCTCGAACCGCCGACCATTTTATCTTCGACATCGAGTCCGT
AGGCATGTTATCTCCAAAGGCGAGTTTTTGTCCTCTTCAGTCATCGGCAG
TTCGATAGTTTGTCTTTCCATCGCGTATACTATATACTTGCAAGTATGTC
CGGTTTTGCTGGCTATCTAACCCGTTTTATGTGGTTCTGTAATACGCGTT
GTGCCTTGCTCGGCATTGATACTTTTTGTGGCTACTCTAGTCCTGGACGT
ACCGTTTTTCGGTTTTGATCGAGACTGCTGTGGACAGGTGAGCTAGTATT
GTGTGTGCTTTTGGTAGAACCATATGATGTTCTATTGCATGCGTTGCGAT
GCTCATGTGCCGTGTGTTCATATGCAAAATAATTGCAATATCAACGTGCC
TTTACCCAGTTGCACTCGAAGCTGGGAAACCATGGGTGCCTTTCTCATGA
TGCCCCAAGTTGACGTATTTTTTGCGGTGTGTTCATGAGACCCTCGTTTG
ACGCTGTTCTTGCATATTTACATCCTTGCCCCTCCCGCCCCTGCAGCAAC
TTCTCAAGGACAGCATCCAGGTCTTGCGACAAAAATGCGACACCCTTATC
TCGGAGGTGGAAGCTTACGAGATTGGTGTAGATTTTGATGAAGCCATGCC
ATGACGCAAAAGTAAAGCCTCCAGGAAGACACGGGCCTGCTGGCTAGAGC
GCTTCTTTTCATCGCCGTTGTACTTACGGGAGCGCGATGAATCGGTCGTG
CGCTGACGATAGGGACGGCGTCACTGCGCGGTGAATTTTTTTATTATGGT
GGTTGCGCCGTGTTTTCAAACGTGACGCACATGGCAGCATCCGCTGTAAC
AGGTGCTTGTGTGCTTATGGATTGCCAATGTTGATAGCGTGTTTTTTCAT
GGTAACCATTGTAATGCAGGAAAACATGATATAAACGGACAACCGATCTG
GTCGATTATGGAGCAAAATCTGCACGAAAGCTCGACGTGATGGAGAGCAA
TGCATCTATCTGCATGCCAGATTGGAGATTGGGTGCTTGGTAGTCCTGGA
TTACCTTGCTTTTCTTGCACAGTTTTTGTGTCAAGGACCATTCCTACCAG
GCACCTGGGGTGCAAACTTGAAATTGCAGGTTTTTCCCTATTGATTCAGC
AATGAGAACTGCAAAT

Coding sequence (CDS) from alignment at H-paniculata_contig4838:2456..12521-

>mRNA_H-paniculata_contig4838.11948.1 ID=mRNA_H-paniculata_contig4838.11948.1|Name=mRNA_H-paniculata_contig4838.11948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2232bp|location=Sequence derived from alignment at H-paniculata_contig4838:2456..12521- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGGGTAGAGTCACAAAATACAGGGTAAACAACGATGCTCCGTCGGA
GGTGTTTGACGCAGACAGCCCGGAAGATCGCGCGATGCTGGGTAGAGTCA
CAAAATACAGGGTAAACAACGATGCTCCGTCGGAGGTGTTTGACGCAGAC
AGCCCGGAAGATCGCGCGGATCGACACCTACCCTATCCGCAACGCGTTGC
GAAGAGGCTAGATCTCAAGGTTGCGGACTGTGGAAGGGAAGACGAGAATG
AATTGGCGTTTGATCTCGTCGGGGTGGACGCGTCTATTGCCAACGCTTTG
CGAAGGATATTACTGGCCGAGGATCGACACCTACCCTATCCGCAACGCGT
TGCGAAGAGGCTAGATCTCAAGGTTGCGGACTGTGGAAGGGAAGACGAGA
ATGAATTGGCGTTTGATCTCGTCGGGGTGGACGCGTCTATTGCCAACGCT
TTGCGAAGGATATTACTGGCCGAGGTGGCGACCGTAGCTATCGAGCACGT
CTACATGTTCATGAACTCTTCCATTATTCACGACGAGATCCTCGCACACC
GATTGGGCTTGATTCCCATCATGGCCGACCCTCATCAGTTCGAGTTTATG
CCGAAGCCCAAGCCTGGTGAAGACGAGGTGGCGACCGTAGCTATCGAGCA
CGTCTACATGTTCATGAACTCTTCCATTATTCACGACGAGATCCTCGCAC
ACCGATTGGGCTTGATTCCCATCATGGCCGACCCTCATCAGTTCGAGTTT
ATGCCGAAGCCCAAGCCTGGTGAAGACGAGGAGGCGACGGAGTTCAACAC
GTGTGTCTTCAAGCTGGAAATCAAGAACCCTGTGAACCCCGCGGATATGC
CCAACCCGATGCCTAAGGGAGCGAGTTACGCCGCCGGGCCTCGACGCACT
TTAAATATTTTCAGGCGAGGAGGCAAGGAGGCGACGGAGTTCAACACGTG
TGTCTTCAAGCTGGAAATCAAGAACCCTGTGAACCCCGCGGATATGCCCA
ACCCGATGCCTAAGGGAGCGAGTTACGCCGCCGGGCCTCGACGCACTTTA
AATATTTTCAGGCGAGGAGGCAAGTGGTGTAGTCACGGCAACCAGGAGAG
TCGATTTATGGAGCAGGGGGGACTAATGCCTGTACACGATGACATTCTGG
TCGCTAAGCTTCGGCCTGGGCAAGAAATTTCTTGTGAGTGGTGTAGTCAC
GGCAACCAGGAGAGTCGATTTATGGAGCAGGGGGGACTAATGCCTGTACA
CGATGACATTCTGGTCGCTAAGCTTCGGCCTGGGCAAGAAATTTCTTGTG
AGATGCACTGCCGCAAAGGTGTCGGAAAAGACCACGCTAAGTTTTCCCCT
GTGGCTACGGCGAGCTACCGCCTTCTACCGGTGGTGTCCCTTAAGGAGGA
GATTGTAGGGGAAGAAGCAGAGGAATTGGTGGTCAAGTGCCCATTAAACG
TGTTCGATATCGAGGACTTGGGGGATGGCGACAAAAGGGCGAAGATGCAC
TGCCGCAAAGGTGTCGGAAAAGACCACGCTAAGTTTTCCCCTGTGGCTAC
GGCGAGCTACCGCCTTCTACCGGTGGTGTCCCTTAAGGAGGAGATTGTAG
GGGAAGAAGCAGAGGAATTGGTGGTCAAGTGCCCATTAAACGTGTTCGAT
ATCGAGGACTTGGGGGATGGCGACAAAAGGGCGAAGGTGGCGCGTCCACG
AGATTGCACCATGTGTCGAGAGTGCATCCGTGAGCCGGGATGGAGTGATA
AAGTTTCGTTGTCTCGAACCGCCGACCATTTTATCTTCGACATCGAGTCC
GTAGGCATGTTATCTCCAAAGGCGAGTTTTTGTCCTCTTCAGTCATCGGC
AGTGGCGCGTCCACGAGATTGCACCATGTGTCGAGAGTGCATCCGTGAGC
CGGGATGGAGTGATAAAGTTTCGTTGTCTCGAACCGCCGACCATTTTATC
TTCGACATCGAGTCCGTAGGCATGTTATCTCCAAAGGCGAGTTTTTGTCC
TCTTCAGTCATCGGCACAACTTCTCAAGGACAGCATCCAGGTCTTGCGAC
AAAAATGCGACACCCTTATCTCGGAGGTGGAAGCTTACGAGATTGGTGTA
GATTTTGATGAAGCCATGCCATGACAACTTCTCAAGGACAGCATCCAGGT
CTTGCGACAAAAATGCGACACCCTTATCTCGGAGGTGGAAGCTTACGAGA
TTGGTGTAGATTTTGATGAAGCCATGCCATGA