prot_H-paniculata_contig4837.11946.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4837.11946.1
Unique Nameprot_H-paniculata_contig4837.11946.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length827
Homology
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BLAST of mRNA_H-paniculata_contig4837.11946.1 vs. uniprot
Match: A0A6H5JYW2_9PHAE (SH2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW2_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.140e-35
Identity = 107/217 (49.31%), Postives = 126/217 (58.06%), Query Frame = 0 
Query:    4 LLCRGRGPGASWQAAAAARGSLGXXXXXEKGGSAIRLQPYVDPGWNYFAGRMGREEAEVLLRGRPEGTFFLRRKSPTVLVLTYVASGG----------GGGRAXXXXXXRKGQGGASPRP---IVRPQQRGGAPFGGEGTGGRSEVDSRRSGSYSAAEDATFVQHALLVYEDGCFGDEKGRLGRFATLEELLKSKISAIARYPLSFRRERDRYVLVE 207
            LL RGRGP  SW+     R SL      +   S        DPGW +FAGRMGREEAE LLRGRP+GTFFLRRK P++LVLTYVAS             G R        +     SPR    +  PQ        GE  G    ++  R     +   +T VQHALL++E G F DEKGRLGRF+TLEELLKSKISAIAR+PLSFRRER+ YVL++
Sbjct:  310 LLERGRGPDPSWRQGVP-RDSLAVATVGDGDASGR------DPGWRHFAGRMGREEAEALLRGRPDGTFFLRRKGPSLLVLTYVASAKRPNCNANTPTSGARNLKSYPANR-----SPRMREMVGSPQ--------GEKLGKGLSLEGVRD----SLAGSTLVQHALLMHEGGFFSDEKGRLGRFSTLEELLKSKISAIARHPLSFRRERNGYVLID 502
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4837.11946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYW2_9PHAE1.140e-3549.31SH2 domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 48..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4837contigH-paniculata_contig4837:4331..9691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4837.11946.1mRNA_H-paniculata_contig4837.11946.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4837 2109..10163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4837.11946.1 ID=prot_H-paniculata_contig4837.11946.1|Name=mRNA_H-paniculata_contig4837.11946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=827bp
MKELLCRGRGPGASWQAAAAARGSLGGGGGSEKGGSAIRLQPYVDPGWNY
FAGRMGREEAEVLLRGRPEGTFFLRRKSPTVLVLTYVASGGGGGRAGGSG
GSRKGQGGASPRPIVRPQQRGGAPFGGEGTGGRSEVDSRRSGSYSAAEDA
TFVQHALLVYEDGCFGDEKGRLGRFATLEELLKSKISAIARYPLSFRRER
DRYVLVEPATDTTHGSAKTPVDRAQSSPRGSSPPSTSPTNPFAPVLQALA
AGNPFRAQPVSPLGSPNAPASIPSSLPLALPDATGFKSAGRDRRSSPHSS
TGSAASGGGGCELVDKRVKTKPGGISAMAAAASGGSLWMEAAAAVQKSMA
SSSTTSTGGKTRRRNTRGNSSARTTGYGMGGGKMLLDSDGRLSRQRSRKG
SVSSNEDGSVSSSAAESADMDNRTLQQRRSDGGCGGGSAVGESAMAKAAE
AAAASAAAAAATAAHPKAKIALERMLAVEAKVDVTTETVELELRPLARQS
RLPAAAPAAAAAAVGARQFSRGSPLSSPRGSMSPMAPKAADNRWLLPAEA
RAASMPRLDAAAALLIDRAWSSRHAVLDSVNALRERTVKLTVVEMTEAAQ
KVRSVSPPPQDRRWPSDSRKRVVGPVTPKKFDGANRIVVGTPRVCLKGST
PRGAQTASGSDFSTPPTAHVGLGLSTCKDFDRILGDDYEATLPEAETTQQ
RREDVGGSSAATERIARPVFSDAGVRCSDFYLKDPARQKSWSGGAGSDSV
VVDGPALERHQSGSPIAIAGAGPCPSSWEAIFSDLDVLEERCGTFVTDWK
ETAAIMVDSCRDEDCVVSCGEGAATQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf