mRNA_H-paniculata_contig4813.11903.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A6H5KJ97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ97_9PHAE) HSP 1 Score: 325 bits (832), Expect = 6.330e-99 Identity = 159/194 (81.96%), Postives = 175/194 (90.21%), Query Frame = 1
Query: 1291 NELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQLQECDGNSALGF 1872
NELDPIML+K+GKD +RFVRPNG VV+YNLDSLVDYFISTGDFLEPETRLPFSD++LR ID K KAAGLSKPSVL AKRDPGRY E+KFQQDALVGLERMTSELVTGML+VVEE DREEGEIRLV ++FPPFADLFKQI AAD+ FA QCMQHY SWL+GPPNRPTEDEM FL+II+ FL QL++ GNS LGF
Sbjct: 299 NELDPIMLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLRVVEECDREEGEIRLVADIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLTQLEDSGGNSQLGF 492
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: D7FNW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW0_ECTSI) HSP 1 Score: 312 bits (799), Expect = 2.290e-98 Identity = 154/188 (81.91%), Postives = 169/188 (89.89%), Query Frame = 1
Query: 1309 MLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQLQECDGNSALGF 1872
ML+K+GKD +RFVRPNG VV+YNLDSLVDYFISTGDFLEPETRLPFSD++LR ID K KAAGLSKPSVL AKRDPGRY E+KFQQDALVGLERMTSELVTGML VVEE DREEGEIRLV E+FPPFADLFKQI AAD+ FA QCMQHY SWL+GPPNRPTEDEM FL+II+ FL+QL++ GNS LGF
Sbjct: 1 MLVKVGKDHYRFVRPNGIVVMYNLDSLVDYFISTGDFLEPETRLPFSDDQLRDIDGKAKAAGLSKPSVLAAKRDPGRYAEQKFQQDALVGLERMTSELVTGMLLVVEECDREEGEIRLVAEIFPPFADLFKQILAADKAFALQCMQHYRSWLEGPPNRPTEDEMGFLDIIISFLKQLEDPGGNSQLGF 188
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A1V9ZM66_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM66_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.230e-58 Identity = 99/183 (54.10%), Postives = 133/183 (72.68%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQ 1836
VN +DPIML ++G RFVRPNG VV+YN+DSLV Y ++TGDF EPETR+PF DE LR +D + AAGL SV+ AK+D + + K ++D L+GLER E+VT ML+V+E+ D E+GE+RLV E+FP FADL+ Q++ D +AAQC +HY +LQGPPNRPT DE +++L F+ Q
Sbjct: 82 VNTVDPIMLTELGPHTFRFVRPNGTVVVYNIDSLVQYILATGDFSEPETRIPFPDEMLRQLDTEATAAGLELGSVVAAKQDKATFEQLKIKRDGLLGLERCAGEVVTEMLQVIEDDDGEDGELRLVMEIFPNFADLYSQLKMNDPDYAAQCHKHYIEYLQGPPNRPTVDESGLYQVVLEFMAQ 264
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A485KK40_9STRA (Aste57867_8354 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK40_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.420e-58 Identity = 96/183 (52.46%), Postives = 137/183 (74.86%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQ 1836
VN LDPIML ++G++ RFVRPNG VVLYN+D+LV Y ++TG+F EPETR+PFSD+ L+ ID +VK++GL SV +A++ ++ K ++D L+GLER E+VT ML ++E+ D EEGE+RLV E+FP FADLF Q+++ D +A+QC +H+ +L GPPNRPT DE E++L F++Q
Sbjct: 79 VNTLDPIMLTELGQNTFRFVRPNGTVVLYNVDTLVQYILATGNFSEPETRIPFSDDILKQIDAEVKSSGLELASVFEAQQQKAKFEALKVKRDGLLGLERCAGEVVTEMLSIIEDEDSEEGEMRLVMEVFPSFADLFGQLKSNDFEYASQCHKHFVEYLHGPPNRPTVDESGLFEVVLDFMKQ 261
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A1V9ZCL8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCL8_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.690e-56 Identity = 99/199 (49.75%), Postives = 138/199 (69.35%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKV-------------KAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQLQE 1845
+N +DPIML ++G RFVRPNG VV+YNLDSL+ Y ++TGDF EPETR+PF D+ LR +D +V KAAGL SV+ AK + ++ ++K ++D L+GLER E+VT ML+V+E+ D EEGE+RLV E+FP FADL+ Q++ D +AAQC +HY +LQGPPNRPT DE ++++ F++Q E
Sbjct: 79 LNTVDPIMLTELGPHTFRFVRPNGTVVVYNLDSLIAYILATGDFSEPETRIPFPDDMLRQLDTEVCPRRGTLSVILRAKAAGLELQSVVTAKANKAQFEQQKIKRDGLLGLERCAGEVVTEMLQVIEDEDSEEGEMRLVMEIFPNFADLYSQLKMNDPEYAAQCHKHYLEYLQGPPNRPTVDESGLYQVVVEFMKQTAE 277
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A024UQM2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQM2_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.850e-56 Identity = 94/194 (48.45%), Postives = 137/194 (70.62%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQLQECDGNSALG 1869
+N LDPIML ++G FVRPNG VV+YN+D+LV Y ++TG F EPETR+PFSDE L+ +D AAG SV+ A++ G++ ++K ++D L+GLER T E+VT ML ++E+ D EEGE+RLV ++FP FAD+F Q+++ D +AAQC +HY +L+GPPNRPT D +++L F++Q+ +S G
Sbjct: 89 LNTLDPIMLTELGPHTFHFVRPNGMVVVYNVDTLVQYILATGSFAEPETRIPFSDEVLKQLDSAATAAGFKFASVVAAQQQKGKFEQEKIKRDGLLGLERCTGEVVTEMLHIIEDDDAEEGEMRLVMDVFPSFADMFGQLKSNDPEYAAQCHKHYMEYLRGPPNRPTVDASGLFDVVLDFMKQVAAQRSSSRYG 282
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A067CQT9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQT9_SAPPC) HSP 1 Score: 204 bits (519), Expect = 2.140e-56 Identity = 97/183 (53.01%), Postives = 130/183 (71.04%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQ 1836
+N +DPIML ++G RFVRPNG +V+YN++SLV Y ++TGDF EPETRLPF D L +D + KAAGL SV AK+D + + K ++D L+GLER E+VT ML+V+E+ D EEGE+RLV E+FP FADL+ Q++ D +AAQC +H+ +LQGPPNRPT DE I+L F+ Q
Sbjct: 83 LNTVDPIMLTELGPHTFRFVRPNGTIVVYNIESLVQYILATGDFSEPETRLPFPDAMLAQLDAEAKAAGLELGSVAAAKQDKAAFEQLKIKRDGLLGLERCAGEVVTEMLEVIEDDDGEEGEMRLVMEIFPNFADLYSQLKMNDAAYAAQCHKHFVEYLQGPPNRPTIDESGLYHIVLDFMAQ 265
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A6G0XFD0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFD0_9STRA) HSP 1 Score: 204 bits (518), Expect = 3.340e-56 Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQ 1836
VN +DPIM ++G RFVRPNG VVLYN+D+LV Y ++TGDF EPETRL FS++ L+ ID KAAG SVL+A + ++ + K ++D L+GLER E+VT ML ++E+ D EEGE+RLV E+FP FADLF Q+++ D +A+QC +HY +L GPPNRPT DE E++L F++Q
Sbjct: 87 VNTVDPIMFTELGPHTFRFVRPNGTVVLYNVDTLVQYILATGDFSEPETRLAFSEDILKEIDSTAKAAGFKCGSVLEAFQQKAKFDQMKIKRDGLLGLERCAGEVVTEMLHIIEDEDSEEGEMRLVMEVFPSFADLFGQLKSNDPEYASQCHKHYIEYLHGPPNRPTVDESGLFEVVLEFMKQ 269
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A7S2GAV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GAV9_9STRA) HSP 1 Score: 204 bits (519), Expect = 4.360e-56 Identity = 103/185 (55.68%), Postives = 132/185 (71.35%), Query Frame = 1
Query: 1297 LDPIMLMKI--GKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQLQE 1845
+DPIML +I G F RPNG V+YNL SL+DYF +TGDF EPETR+ FS+ +L+ +D + A L+K SVL AKRDP R+ E F++DA+ GLER ELV ML V+E +D EEG++RLV LFP F+DL +Q+ +AD FAA CMQH+ S+L GPPNRPT D FL I+L FL+Q+QE
Sbjct: 109 MDPIMLTEIPPGTVTFDFHRPNGTKVVYNLTSLIDYFNTTGDFSEPETRIEFSESDLKKMDQMAEKAKLNKSSVLAAKRDPARFDEANFKRDAMNGLERCAGELVADMLNVIESNDPEEGQMRLVMYLFPLFSDLHRQLLSADTEFAAMCMQHFVSYLSGPPNRPTHDRFGFLPIVLHFLKQVQE 293
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Match: A0A2D4BJA5_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJA5_PYTIN) HSP 1 Score: 204 bits (518), Expect = 6.390e-56 Identity = 102/196 (52.04%), Postives = 138/196 (70.41%), Query Frame = 1
Query: 1288 VNELDPIMLMKIGKDCHRFVRPNGRVVLYNLDSLVDYFISTGDFLEPETRLPFSDEELRAIDIKVKAAGLSKPSVLDAKRDPGRYTEKKFQQDALVGLERMTSELVTGMLKVVEESDREEGEIRLVTELFPPFADLFKQIRAADRHFAAQCMQHYTSWLQGPPNRPTEDEMDFLEIILGFLRQLQECDGN-SALGF 1872
+N +DPIML ++G FVR NG VV+YN+D+LV Y ++TGDF EPETR+PF+DE+LR ID + K A L + SVL+AK + + E+K ++D L+GLER E VT ML VVE+ D EEGEI L+T LFP F+ +F+QIRAAD+ +A QCM H+ ++L+GP NRPT D L +IL FL + + + SA GF
Sbjct: 108 INTVDPIMLTELGHHTFDFVRRNGSVVVYNVDTLVQYILATGDFSEPETRIPFTDEDLRRIDAEAKRAKLDERSVLEAKYNKHVFDEQKVKRDGLLGLERCAGEYVTKMLGVVEDEDAEEGEIELITVLFPSFSSIFEQIRAADKEYAKQCMNHFKAFLRGPKNRPTTDHSGLLPVILSFLEDVSKGRQDASAFGF 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4813.11903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4813.11903.1 >prot_H-paniculata_contig4813.11903.1 ID=prot_H-paniculata_contig4813.11903.1|Name=mRNA_H-paniculata_contig4813.11903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=575bp METRSSPSLQILHGLARHAQLEPGSLTTLSKPALFSHLRSKYNYSRLERAback to top mRNA from alignment at H-paniculata_contig4813:361..7645- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4813.11903.1 ID=mRNA_H-paniculata_contig4813.11903.1|Name=mRNA_H-paniculata_contig4813.11903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7285bp|location=Sequence derived from alignment at H-paniculata_contig4813:361..7645- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4813:361..7645- >mRNA_H-paniculata_contig4813.11903.1 ID=mRNA_H-paniculata_contig4813.11903.1|Name=mRNA_H-paniculata_contig4813.11903.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3450bp|location=Sequence derived from alignment at H-paniculata_contig4813:361..7645- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |