mRNA_H-paniculata_contig48124.11901.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig48124.11901.1
Unique NamemRNA_H-paniculata_contig48124.11901.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 233 bits (594), Expect = 1.790e-69
Identity = 136/317 (42.90%), Postives = 186/317 (58.68%), Query Frame = 1
Query:    1 GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVI-AGRREQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPA--EGKVKISAPESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAVPDFG 942
            GRKAI + W + +K  E+G VAR KARLV  G SQ+ G D+ ET APV R+ +LR   +L A  ++E+  MD+  AYLN  ++EE+F++ PP F   +     V RL+K LYGL QSGR WN   D  +  IGL ++  D C+Y+ R+  GE  + VTV VDDL+I A  +++ +  K  +   F MKDLG   +++GIEV RDR  GT T+SQ  YI  +L RYGF    GV TP   +   K+        P+ P        M+G LMYA+  TR DIAYAV + ++   +P  E  + CKR+F YLS   D+G
Sbjct:   16 GRKAIGSMWTYVKKSDENGLVARLKARLVALGNSQIPGIDYTETYAPVVRLESLRAAIALAAIENLEMIQMDIRGAYLNGELKEEVFMQQPPGFEDGTGR---VWRLKKSLYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYY-RERDGE-RVWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFHYLSGTRDYG 327          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 237 bits (604), Expect = 5.720e-67
Identity = 132/318 (41.51%), Postives = 189/318 (59.43%), Query Frame = 1
Query:    4 RKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVI-AGRREQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPK------LLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAVPD 936
            RKAI  +W+F RK  E+G + RYKARLV QGFSQ+ G DF  T APV R  +LR + ++ A  ++E++ +DV  AYLN  + EE+F++ P  F   +     V RL+K LYGLKQSGR WN  LD  L  +   +S  D C+Y  R E G T+  +TV VDDL+I   + ++++E K  + + F + DLG    ++G+EV+RDR   T ++ Q SY+  +LK+YG + CR V TP +  V ++     D   EP+      L G     VGSLMYA+ GTR DIAYAV + ++   +P    ++  KR+F YL+   D
Sbjct:  769 RKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQPDGFHDGTSK---VCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYI-RTENGHTSY-ITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKKYGMENCRPVSTPMDPNVVLTRVNENDVKDEPREDRDERLGGRYAAAVGSLMYAAIGTRPDIAYAVQKLSKYSSNPGNSHWTALKRVFRYLAGTRD 1081          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 232 bits (591), Expect = 3.750e-65
Identity = 130/311 (41.80%), Postives = 185/311 (59.49%), Query Frame = 1
Query:    1 GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIAGRR-EQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAV 930
            GR  I  KW+F +K  EDG+++RYKARLV QG+SQ+ G D+ ET APV R+ ++R    + A  D+E+  MDV  AYLN  +EEE++++ P  +   S     V RLRK LYGLKQSGR WN   D  L  IG  +   D C+Y    EG  T  ++TV VDDL+I     E + E K  +   F +KDLG   +++GIE++RDR NGT ++SQ  YI  VL R+G    R V TP +  V I    + D  ++P ++G    ++GSL+YA+ GTR DI++AV +  +   +P  E ++  KR+  YL+  
Sbjct:  919 GRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNV-ILKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGT 1223          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 220 bits (560), Expect = 4.450e-65
Identity = 125/317 (39.43%), Postives = 184/317 (58.04%), Query Frame = 1
Query:    1 GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIA-GRREQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAP--ESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAVPDFG 942
            GRKAI +KW+FK K   +G + RYKARLV +GF Q  G DF ET APVA+ +++R + S+ A++ + L  MDV  A+LN L+EEE+++K P  F   ++    V +L++ LYGLKQS R WN T+D+F+  IG  +  TD C+Y  RD+  +  + V + VDDL++A    + +   K  +SERF M DLG L   LG+EV RD  +G  ++ Q  ++  VL ++G   C+ V TP +  +K++    E   K  +          VG++MY   GTR D+A AV   ++   DPC   +   KR+  YL A P  G
Sbjct:   34 GRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVD-AKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDD--KAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHG 347          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 221 bits (562), Expect = 6.490e-65
Identity = 127/311 (40.84%), Postives = 182/311 (58.52%), Query Frame = 1
Query:    1 GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIAGRR-EQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAV 930
            GR  I  KW+F +K  EDG+++RYKARLV QG+SQ+ G D+ ET APV R+ ++     + A  D+E+  MDV  AYLN  +EEE++++ P  +   S     V RLRK LYGLKQSG  WN   D  L  IG  +   D C+Y    EG  T  ++TV VDDL+I     E + E K  +   F +KDLG   +++GIE++RDR NGT ++SQ  YI  VL R+G    R V T  +  V I    + D  ++P ++G    ++GSL+YA+ GTR DI++AV +  +   +P  E ++  KR+  YL+  
Sbjct:   12 GRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNV-ILKKRTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGT 316          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 228 bits (582), Expect = 6.100e-64
Identity = 126/312 (40.38%), Postives = 183/312 (58.65%), Query Frame = 1
Query:    4 RKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVI-AGRREQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAVPD 936
            R A+  KW+F+RK  ++G V +YKARLV QG+SQ+ G DF ET APV R+ ++R + +L   ++ E+  MDV  AYLN  ++EE++++ P  F   S  I    RLRK LYGLKQSGR WN  L   L  +G  R   DPC+Y    + GE  + +TV VDDL++     + ++E K ++ + F + DLG   +++GIE+ RDR  G   ISQ  YI  +LKRY  +    V  P +  V  +A E  ++ ++ +L G    MVGSLMYA+ GTR DI+YAV   ++    P    ++  KR+  YL+   D
Sbjct:  948 RNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRIC---RLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQI-ITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTA-EDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRD 1254          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 221 bits (563), Expect = 3.580e-63
Identity = 128/315 (40.63%), Postives = 191/315 (60.63%), Query Frame = 1
Query:    4 RKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIAGRREQ-VDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKIS-APESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAVPDFG 942
            RKA+ +KW+F+ K   DG+V  +KARLV QGFSQ  G+D+ ET +PVAR  ++RTV +L A+H ++L  MDV  A+LN  ++EE+++K    F    ++   V RLR+ +YGLKQS R WN+ LD  L  +G  ++T DPC+Y  ++EGGE   ++ V VDD+++AG+ +Q ++E K  ++E+F+MKD+G L   LG++V     +    I Q +Y + VL+R+G +  +   TP     K+  A + + +  +     AV    G L+Y ST TR DIAYAV   AR   DP  E +   KRI  YL+   D G
Sbjct:   23 RKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAV----GHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMG 330          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 225 bits (574), Expect = 7.340e-63
Identity = 129/307 (42.02%), Postives = 187/307 (60.91%), Query Frame = 1
Query:   13 IRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFF--ETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIAGRREQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPKLLGAV--LGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYL 921
            + +K +F+ K   +G+V+ +KARLV QGFSQV G D+   ET APV+R+ ++RT+ SL A HD EL  MDV +AYLN ++EE ++++LPP F+P  +    V RL+K LYGLKQ+GR W  TL   +  +G  R   D  +++ R+  GE+ ++V  +VDDL I G  + VD F  +I +RF M DLG L  +LGIEVRRDR   T  ISQ SYI  ++ R+  D+   +  P +    +   +S   P + + +  V     VGSLMYA+ GTR DI +AV   ++ M++P R  +   KR+  YL
Sbjct: 1072 VGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYL 1375          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI)

HSP 1 Score: 214 bits (544), Expect = 8.080e-63
Identity = 119/313 (38.02%), Postives = 186/313 (59.42%), Query Frame = 1
Query:    1 GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDIPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIAG-RREQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPKLLGAV--LGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAV 930
            GRKAI  +W++K K   +  V RY+ARLV +G++Q EG DF E  + V R++T+R V +L A  D+ LE +DV  A+L+  +EEE+++  P  F+   ++   V RL+K LYGLKQ+ R W    D +++ +G +R + DPC YF R  GG   +++ + VDD+++AG  +++V E K  ++  F MKDLG  +++LG++V RDR N    +SQ +Y+++ L R+     + + TP     K+S+       +E   +  +     VGSLM+A   TR DIA AV   +R M +P RE +ST KRI  Y+   
Sbjct:   22 GRKAIGNRWVYKIKRDGNNQVERYRARLVVKGYAQKEGIDFNEIFSLVVRLNTVRVVLALCAVFDLHLEQLDVKTAFLHGDLEEEIYMLQPEGFAETGKE-NLVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRS-GGNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGT 332          
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.380e-62
Identity = 124/316 (39.24%), Postives = 180/316 (56.96%), Query Frame = 1
Query:    1 GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVARMSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRDI-PFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEGGETNLLVTVNVDDLVIAGR-REQVDEFKHNISERFRMKDLGSLSRVLGIEVRRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADKPSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTCKRIFCYLSAVPDFG 942
            G + I + W+   K  + G + R KAR + +G+SQ  G D+  T APVA M+T+R V +L    D+EL++MDVD AYL + +EE++++K PP +  +  +    V RLRK LYGLKQSGRNW+  +D +    GL  S  DPCLY      GE  L++ + VDDL+I    R   D+FK +IS  F MKDL  L  +LG+ ++R+R N T  ISQ  YI  +L ++G   C+ V TP EG +     +     +E       + +VGSL+YA+  TR DIA+AV    + ++   +E +   KR+  YL    D G
Sbjct:  234 GERCISSGWVETDKRDQKGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVKPDNE------YMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVG 542          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48124.11901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A146H3U8_MYCCL1.790e-6942.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067T5Q4_GALM35.720e-6741.51Integrase catalytic domain-containing protein (Fra... [more]
A0A284QR88_ARMOS3.750e-6541.80Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A5D6YB57_9STRA4.450e-6539.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284R853_ARMOS6.490e-6540.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY6.100e-6440.38Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A7D9KES8_PARCT3.580e-6340.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2G8RWY5_9APHY7.340e-6342.02Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A2Z7AL20_9LAMI8.080e-6338.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TJ26_9STRA3.380e-6239.24Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig48124contigH-paniculata_contig48124:141..1148 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score221.5
Seed ortholog evalue5.6e-55
Seed eggNOG ortholog161934.XP_010676254.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3894V@33090,3GY0Z@35493,COG2801@1,KOG0017@2759
COG Functional cat.T
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons2
Model size942
Cds size942
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930426.3607225-CDS-H-paniculata_contig48124:140..9221622930426.3607225-CDS-H-paniculata_contig48124:140..922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48124 141..922 +
1691481286.79806-CDS-H-paniculata_contig48124:140..9221691481286.79806-CDS-H-paniculata_contig48124:140..922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48124 141..922 +
1622930426.37829-CDS-H-paniculata_contig48124:988..11481622930426.37829-CDS-H-paniculata_contig48124:988..1148Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48124 989..1148 +
1691481286.8083665-CDS-H-paniculata_contig48124:988..11481691481286.8083665-CDS-H-paniculata_contig48124:988..1148Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig48124 989..1148 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig48124.11901.1prot_H-paniculata_contig48124.11901.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig48124 141..1148 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig48124.11901.1

>prot_H-paniculata_contig48124.11901.1 ID=prot_H-paniculata_contig48124.11901.1|Name=mRNA_H-paniculata_contig48124.11901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp
GRKAIRTKWIFKRKLKEDGSVARYKARLVTQGFSQVEGEDFFETNAPVAR
MSTLRTVFSLVAEHDIELEDMDVDAAYLNALVEEELFVKLPPEFSPFSRD
IPFVRRLRKRLYGLKQSGRNWNNTLDDFLVWIGLDRSTTDPCLYFSRDEG
GETNLLVTVNVDDLVIAGRREQVDEFKHNISERFRMKDLGSLSRVLGIEV
RRDRPNGTTTISQGSYIREVLKRYGFDKCRGVPTPAEGKVKISAPESADK
PSEPKLLGAVLGMVGSLMYASTGTRLDIAYAVHQAARRMEDPCREDFSTC
KRIFCYLSAVPDFG
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mRNA from alignment at H-paniculata_contig48124:141..1148+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig48124.11901.1 ID=mRNA_H-paniculata_contig48124.11901.1|Name=mRNA_H-paniculata_contig48124.11901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig48124:141..1148+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGCGGAAGGCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGAAGGA GGACGGCAGCGTGGCACGCTACAAAGCGCGACTGGTGACTCAAGGTTTTT CACAGGTGGAGGGTGAAGATTTCTTTGAAACCAATGCCCCCGTAGCTCGC ATGTCGACGTTACGTACCGTTTTTAGCCTGGTCGCCGAACATGATATCGA ATTAGAAGACATGGACGTAGACGCGGCCTATTTGAACGCCCTGGTAGAAG AAGAGCTGTTTGTTAAGCTACCCCCCGAGTTTTCTCCTTTCTCCCGAGAC ATACCATTTGTGCGCCGCCTGCGTAAAAGGCTGTACGGCCTCAAGCAGAG CGGTCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTTGGATAGGAC TCGACCGTTCCACTACCGACCCATGCCTGTACTTTTCCCGCGACGAAGGG GGAGAGACAAACCTTCTGGTGACCGTGAATGTTGACGACCTGGTCATTGC TGGTCGTCGTGAGCAAGTAGACGAGTTCAAGCATAACATAAGTGAGCGTT TTAGGATGAAAGACTTGGGCTCTCTCTCGCGTGTGTTGGGAATAGAAGTA CGACGTGACCGCCCTAATGGTACCACAACCATCTCGCAGGGTAGCTACAT CCGCGAGGTACTAAAAAGATACGGTTTTGATAAGTGTCGAGGAGTACCCA CCCCTGCAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAG CCCTCCGAACCGAAGTTACTTGGAGCTGTACTGTCGGACATAGGCGCAGC AGTACAAGAAATCAGCAGAGGGAGAAGTGGCAATTCAACTGAATACAGAG GCATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAGACTTGATATA GCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGATCCATGTCGAGA AGATTTCAGTACATGCAAGCGCATTTTTTGTTATCTCAGTGCTGTGCCTG ACTTTGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig48124:141..1148+

>mRNA_H-paniculata_contig48124.11901.1 ID=mRNA_H-paniculata_contig48124.11901.1|Name=mRNA_H-paniculata_contig48124.11901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig48124:141..1148+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGCGGAAGGCGATTCGTACGAAATGGATTTTCAAGCGGAAACTGAAGGA
GGACGGCAGCGTGGCACGCTACAAAGCGCGACTGGTGACTCAAGGTTTTT
CACAGGTGGAGGGTGAAGATTTCTTTGAAACCAATGCCCCCGTAGCTCGC
ATGTCGACGTTACGTACCGTTTTTAGCCTGGTCGCCGAACATGATATCGA
ATTAGAAGACATGGACGTAGACGCGGCCTATTTGAACGCCCTGGTAGAAG
AAGAGCTGTTTGTTAAGCTACCCCCCGAGTTTTCTCCTTTCTCCCGAGAC
ATACCATTTGTGCGCCGCCTGCGTAAAAGGCTGTACGGCCTCAAGCAGAG
CGGTCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTTGGATAGGAC
TCGACCGTTCCACTACCGACCCATGCCTGTACTTTTCCCGCGACGAAGGG
GGAGAGACAAACCTTCTGGTGACCGTGAATGTTGACGACCTGGTCATTGC
TGGTCGTCGTGAGCAAGTAGACGAGTTCAAGCATAACATAAGTGAGCGTT
TTAGGATGAAAGACTTGGGCTCTCTCTCGCGTGTGTTGGGAATAGAAGTA
CGACGTGACCGCCCTAATGGTACCACAACCATCTCGCAGGGTAGCTACAT
CCGCGAGGTACTAAAAAGATACGGTTTTGATAAGTGTCGAGGAGTACCCA
CCCCTGCAGAGGGAAAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAG
CCCTCCGAACCGAAGTTACTTGGAGCTGTACTGGGCGGAAGGCGATTCGT
ACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACG
CTACAAAGCGCGACTGGTGACTCAAGGTTTTTCACAGGTGGAGGGTGAAG
ATTTCTTTGAAACCAATGCCCCCGTAGCTCGCATGTCGACGTTACGTACC
GTTTTTAGCCTGGTCGCCGAACATGATATCGAATTAGAAGACATGGACGT
AGACGCGGCCTATTTGAACGCCCTGGTAGAAGAAGAGCTGTTTGTTAAGC
TACCCCCCGAGTTTTCTCCTTTCTCCCGAGACATACCATTTGTGCGCCGC
CTGCGTAAAAGGCTGTACGGCCTCAAGCAGAGCGGTCGAAACTGGAATAA
CACTCTTGACGATTTTCTTGTTTGGATAGGACTCGACCGTTCCACTACCG
ACCCATGCCTGTACTTTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTG
GTGACCGTGAATGTTGACGACCTGGTCATTGCTGGTCGTCGTGAGCAAGT
AGACGAGTTCAAGCATAACATAAGTGAGCGTTTTAGGATGAAAGACTTGG
GCTCTCTCTCGCGTGTGTTGGGAATAGAAGTACGACGTGACCGCCCTAAT
GGTACCACAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAG
ATACGGTTTTGATAAGTGTCGAGGAGTACCCACCCCTGCAGAGGGAAAAG
TGAAGATTTCGGCACCCGAGTCGGCCGACAAGCCCTCCGAACCGAAGTTA
CTTGGAGCTGTACTAGGCATGGTAGGATCACTCATGTACGCCTCGACAGG
AACTAGACTTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTATGG
AGGATCCATGTCGAGAAGATTTCAGTACATGCAAGCGCATTTTTTGTTAT
CTCAGTGCTGTGCCTGACTTTGGCAGGCATGGTAGGATCACTCATGTACG
CCTCGACAGGAACTAGACTTGATATAGCATACGCGGTACACCAAGCAGCA
CGTCGTATGGAGGATCCATGTCGAGAAGATTTCAGTACATGCAAGCGCAT
TTTTTGTTATCTCAGTGCTGTGCCTGACTTTGGC
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