mRNA_H-paniculata_contig4809.11894.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4809.11894.1
Unique NamemRNA_H-paniculata_contig4809.11894.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4809.11894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4809contigH-paniculata_contig4809:1285..14430 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size1813
Cds size1368
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4809.11894.1prot_H-paniculata_contig4809.11894.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4809 2316..14430 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930425.173557-UTR-H-paniculata_contig4809:1284..16751622930425.173557-UTR-H-paniculata_contig4809:1284..1675Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4809 1285..1675 +
1691481286.1456635-UTR-H-paniculata_contig4809:1284..16751691481286.1456635-UTR-H-paniculata_contig4809:1284..1675Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4809 1285..1675 +
1622930425.1943655-UTR-H-paniculata_contig4809:2262..23151622930425.1943655-UTR-H-paniculata_contig4809:2262..2315Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4809 2263..2315 +
1691481286.155778-UTR-H-paniculata_contig4809:2262..23151691481286.155778-UTR-H-paniculata_contig4809:2262..2315Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4809 2263..2315 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930425.2088218-CDS-H-paniculata_contig4809:2315..23841622930425.2088218-CDS-H-paniculata_contig4809:2315..2384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 2316..2384 +
1691481286.1655188-CDS-H-paniculata_contig4809:2315..23841691481286.1655188-CDS-H-paniculata_contig4809:2315..2384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 2316..2384 +
1622930425.2231257-CDS-H-paniculata_contig4809:10941..110681622930425.2231257-CDS-H-paniculata_contig4809:10941..11068Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 10942..11068 +
1691481286.1770976-CDS-H-paniculata_contig4809:10941..110681691481286.1770976-CDS-H-paniculata_contig4809:10941..11068Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 10942..11068 +
1622930425.2451916-CDS-H-paniculata_contig4809:11385..116121622930425.2451916-CDS-H-paniculata_contig4809:11385..11612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 11386..11612 +
1691481286.1857631-CDS-H-paniculata_contig4809:11385..116121691481286.1857631-CDS-H-paniculata_contig4809:11385..11612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 11386..11612 +
1622930425.2605722-CDS-H-paniculata_contig4809:12105..129211622930425.2605722-CDS-H-paniculata_contig4809:12105..12921Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 12106..12921 +
1691481286.194384-CDS-H-paniculata_contig4809:12105..129211691481286.194384-CDS-H-paniculata_contig4809:12105..12921Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 12106..12921 +
1622930425.2751987-CDS-H-paniculata_contig4809:13580..136341622930425.2751987-CDS-H-paniculata_contig4809:13580..13634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 13581..13634 +
1691481286.204046-CDS-H-paniculata_contig4809:13580..136341691481286.204046-CDS-H-paniculata_contig4809:13580..13634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 13581..13634 +
1622930425.2919066-CDS-H-paniculata_contig4809:14355..144301622930425.2919066-CDS-H-paniculata_contig4809:14355..14430Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 14356..14430 +
1691481286.2200968-CDS-H-paniculata_contig4809:14355..144301691481286.2200968-CDS-H-paniculata_contig4809:14355..14430Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4809 14356..14430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4809.11894.1

>prot_H-paniculata_contig4809.11894.1 ID=prot_H-paniculata_contig4809.11894.1|Name=mRNA_H-paniculata_contig4809.11894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=456bp
MAQPPNVAVSSIRRNCDYCVRKKCIGNHDGSGCSMCLRKGLVCVYSAKKK
PGPKSRTNHDEGEEEGTNMPSVAASTTAYAHSNFYAGGRSSSFDTEDGGE
VYLQSSELYLAPDHLGTPRKNAQEHDLETPNKKARTRARREQQQVHSGGG
APVTPPSLCRSAQYSTQNPYRPSSAMRFFDCIEGGDDRTRILRQQRHQQQ
RHQHQQQKQQQQQRQQQQQQQQQQHQQQQVRVSVGVGMASMGVADSSRGA
GRTPLTLLDPRVTLCSPTGRGGTGNLLPLNGDVKGGSRTGSRGAFALSQA
DRGGPVTPPSAYRPAPHAPYYQHGPSAMSHGCEPAVARRRASADFVRQRP
FNDPPVVGMGGVTGGAAAGLTFSDSIAGLISPNDGPPGEFLGLDEDGQDS
GLGSQIADLLRDQAIELSESDGSTVCSSDDESGKGCYRRKPTMEPLDGSG
LMPLRN
back to top

mRNA from alignment at H-paniculata_contig4809:1285..14430+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4809.11894.1 ID=mRNA_H-paniculata_contig4809.11894.1|Name=mRNA_H-paniculata_contig4809.11894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13146bp|location=Sequence derived from alignment at H-paniculata_contig4809:1285..14430+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCCGTGACGACTTTTGAACTCTTGTATAGTGATCCCACGCTCTGTAACC GCACGTTTGCTGACACGCACGCATTGTGGGTGGCATTCGTCCACGTATAA ATTCGTTTCGTCGAGGCGCACAGCGGCGAGACGCAGCGGTGAGGCACAAC GGCGAGGCGGAGTGCCTGATCTTCTGAGCATTGTGAAGCAACTGGACAAG GCTAAAGAGAAGAATAGGCGAAAAAACGCCCAACAAAACTGCTTCGCGTT CTCTTCGCGTGAGCAGGTCGGTCCCACCGCCAACACCGCCACCGTTGCTA TTGAAGTGACCTCTGGGCCTAGAGACGGCCAGGGGTGGACCGACGTGTTG AGGGGACACGCTGAACGGCCGTTGTGTATGTGAGAGAACACGTGAGTTTC AGGGAGAGTAATCTCCAGCGTTCAGCTCGAACTTGACATTTTTCAACACT TTCGCTGTCGTGAGTCCATGTTATGTGATGTGATTGATGTGTGACGCCCG CCCCCACGAATTTTCGCTGTTAACATGTTTCGTCATGAAATGCGACAGTA CGCTGTGGTCTCCACCTCTTGCTTCTGGCTGCATTCTTCGCCCCTCGACA GCCGAGCGAGCCGTTGTCGTGTCGTGATGCTCTGATTTGTCTCTTCCGTT GTCCATCCATCCTATGCACCTGTGTCCACTAGCTTTCGTCGTTTCCCTTT CAAGAAGTAATCTATAAATATTGAAAAAGTACTAATATGAAATGTATGTC CATCATCGTCACATGCTATTTTTCCTGTCTCTGGGACCCACTTTCCCGCA TTTTTCCAGTTTTGCATCCTATCCCACCAAAAGTCACGAAATTTGTCTCA TCCAGCGCTTTTGTTTGATACGCAGGGTGTACTTTGCTTGACAGTCATAA GGAGACAGCGTGCTTACCGTAAACCATGGGCTTCTCGCCTCATGTGTTTG CTGTGCGTTTTGCCTTTGTCCATCACAGATTTCTGTCGGCAGTTGAGGGC AGCAGGCCAGAGTCATTTATCTGAATTTAGGATGGCGCAGCCCCCTAATG TGGCGGTTTCTTCTATCAGAAGGAACTGCGACTACTGCGTCCGCAAGAAG GTATGTGAGGGGGCAGGATATCGTTGAGTCGGAGCAAGGGTCTTGTTTGA GTTTGATTTCAGAGCGGTTGAACGCCCAGCGGTTTGCAAAGATGTTGTGT GACGGCTTCGTTTGGTACGGAAATTTGTCTGTGGTACTTGTATGAACAGA CTTCTTTAGAAAGAACAACCGCCTTCCTTGACATTGAGGCTCGTTTTAGA GAGTATGGGGCATGCGCACGCGACATCGTGTCGGTGCTTTGTGCTTCCGT TATTTTGCTCGATTTTCTTCGCTGTGCGCCTCGCAAGGACGTGTATCCCT GGGGTGCCTCTGTCGGTGTCTTGTGACGCGCATAGCTTTTATTGGGCCGC AAGCATTTGAGTTGGACAATGGTACCATACAGTGTGAGATGAACACCTGT CACCAAGGCAAAAAATATACATGAAAACAGAAAACAAGAGAGAAAAGACA GGTAAAAAAAAATCTTCGGAGGTGTTGGGCCGAGACAAACTTTGCATCTT CCCAATCAGATTAGAGCCAGTACCCTTGCCAAAGCGGTGGAAACACTCAT CAACAGACGCCGTGACTATACACGAACATTGTGTGTCAAATTGCCTAGAC AGTGTTATCAGGTGGAGTGGAACAAAGTCGATGAAGTGGTGGTACGCGCC GACAGCAGATAGATATGTGTGTGTGATGCGTCAGCCATTGCAATGGTCTG TTTTCTGACGAGTCGTGCGCTCACTAGCACATACATTCTGAAAACTTGGT TAGGCTCAAATATTGCTGCTCCCCGACAACGACACAAAGTCCAGCCGTCG ACAAGCTATTGGACATTGGAACATGCGATCGTACTTGTCATACCTCGTCA TTTGTTGGTATAAATAGTCAGGGGGTTCCATTTTTTTGTGCACTATCTCG GACAACTGATTTACTACAGACAGTGACGTGCTACGCGATGCATAGGAAAT TGTCACAGATTCGGTTATTTCTCGTGCACGGATATGAGTAGCTTCCTTCG CCTCGAAACTGTTGAAGCCAACCTGTGTACAAATATATTTTGATCAGATT TCACAGACGGTATACTAGAGAGGTTGGTACCACCGTCTGCAATCGCCGAT AGACAGTGCCCTCCCTACTTCTGCGTTATCCGCACTTGCAATTGTGATGT TTTATATTACCAACTGTGTTTATTTATGACATGTATTACTCTCTTGTACA CGTACAAGTAACGAGTGTCTGGACATATGTGTCTGGACATCTGTGTACAC CAAATACCGTCTTCCATTGCATACTGCTTTGACAAAGAATGCTGTAAACA CTACAGTGCGGTGTGGCGGTACATCATTTCCTCCTGTCTATTGCTTTCCT TCGGATCTATTCTTGGGTTATACACAGTGAAGAAAGCTCTTGTTTGGATC TATTTTCTCCAACGCATATCTCTCCTTACTAGTATTTTAATATATATATT TTTTATACATCTAAACTTCTGTGAACAAGGTGTGACATGAATGTTTCGCC GGGGCTATGAAATGACGTCCTTGTCTTCTTGTGTTTACGAGCCTGTGAAG GCTATGGTTGAGTTTCGCAAACCACATGCATTAAAAGATTCGGAATGCCG ACCTGGTCGCCGCATGTTCACGCAAACATAGTCAATGTTGACGAAAATAT CTGCAGAATTTCGAGGGACAGTAATAAAGTATGTTGGGGCGACTTTTGTT TTGATCTCGTCTATTATTTGGGTAATGTTGAAGGGGCCACTCTATCGTTC TTTGCACTTTCGTTTTTCTTATCGCCTGGGAGCGTGACGTCTTCGTCCAG GCTTGGGTCCACAGCGCCTCTCAACAACGAGATATTCATTCATCCGCACG TCACATGTATGTCCGACTCCATGCGGAACAACTTTCATCCTACATAGGTC GATTTAACGCCTTTCATTTTGATTGCTTAAAAAACGGATAGTCCTGTAAG TGAAGATGGCTAAACGAGGGAGCGGACGCGATTTTTTTTTTACGAAAGCA TATGCATCCCGTATCTAATCTTTGTGCGGACGGACGTACTACAGCTGATA GAACTACAGTAGGTGCGCTGATTTCAGCTGTAACACGGATCCGGTCCAGA TAGTGATGAAAAGTATATTACAGACAGTTCTTGTGTATAGCTACGATGCA CACTAGAGACAGCACACAGACACACGAGTACACCAGGCAGCAGATGCCAG CACTATGCATGGTTGAAATTAAACTTGTTTGGAATCAATCATCAGACTTC CCCCCCGACGGTCAAACAAGTACGAGAAATAGTGCACGTCATTGAGATTG CCGAGGTCAAAAGGAGTACCCACCTCTATCGTTTCTGTGACAAGAATGAT TCTACTTGTGTGCATTTTTGTATTTGAAGTCAATCAAAGGTTGACTGGTG CTTGCAGGCGCAACGGTACGTGTGCTGCTTTGGACGTAAATCGAGCGGTG ACGTGTATTGGACGTAAATCGATCGTAAAAAAATACCACGTTTTCCTGCA GCAAAGAAAATATGAGAAAATAGTGCGCGGGACGGGAGACATCGAAGATT TACTGCAAAGTATGGAAAGTTGTAGGAGAAACTCTGGGAGTTTACGGCAT CTCACCCAAGGGATTCGTAGCTTTTGCCGCTGTACAGCATGACTGCGATG CTGTTGCGTGTGATGATACTCGGCAAAGCAGGGCAATACATTTTGTCCCA CGTCGTTACAGGTGGAACGTGACCAAAAACGTACGAATATCCTCTGTGCC ATGTTCATGTAGCTGGGCATTAGGCTTCTTGCACTAAAGGATGTTTCGCC GGTCGATTTTCGCGTATCCCGAGTGTTGAAGTATGTATATTTGGGGACTC TCCAGGGTCAGGATATTGACGCTGTACCGCTGTACCGCGCCACTAGATGC CTACAGAATACCCATTCGAGAAAAATGCATCGGAAGAGTTATTTAGGCAG ATGGAGATCACGCTCACATACAGTGAGGGATGAGGCAAGGGCTTGTTACT TACTTTGTAGTACAGGGTCATGCCTTTCCCCGTGCGTTTATCGAAGCTGC CGTTAGTTGTGCTGCCGAATGTGGAGGTTATGTTGAATAACTGCTGGTGT CCACGATATCGATAGTGCGTGTGTTGGTGGCAGGCTTGTACATAGGGGCA AACCGTCATATTTGGTGATTAAATTGCAGCTTTTTACGTGAGGAAGGATG AGAACATGGATCAATTAGCATGAATGACCTACTGTTACCGACGACAGCAG AAAGAACCGAGAGAGAGGGGGAGGGGGGAAGGACAATGCAACCCTCCATT TTGCCAGCTGAATTTTTCATTCTTGTAGTATATCCCTGCCATAGTAAATT GAAATATAACTCTCAACCTCATATTATAACTCCGTTTTACCCATGTTGGG GTTATGCTGCTGACTTCAACGTACACTTCTATACACTTATCAAGTGAAGT TTTGTGACAATCAAGCGCGTACTAATTTCTTCCATGCGGAGGACAGATTC CAATTCCCTTCTGCAAAATTCTGTTATGTTTCTGCCATGCATCGCTGCGG TGGCGGCAGCAGGCGGACGGTATCGGCCGCCAATGCGAGGTAGTTGCTGA AATTCTGACTTTGTCGAGGAGGTGGGGTCGACTCAAGGCAGAAGTACTGT ATACTAACGGGCGAAAATAATTGAAACAGGGAGATATAAAAATGCAGTGA TGAGCTAGTTTGCATCTGACCACCCTCCATCATCCATTAATATTCGAGTT CAGGTAAAGCGAACTTGCATAGGAACGAAGGAGCAATCAAAAGCCATGAA GTATAATGAAGGAAAACCCATAAGTGAGAGAGCTTCACTGCACATGGTAC TCCATAACAGAGCTCGACCCCTTAGCTCTTGATAAATTGAGTAGCGCATA TTTTGTTTGACTTTAATCCGTTTCATATTGAAGAGGCCATGTTTTTTGGG CCTCGTCGCCAAGGAAGACACAGACAAATGGTCTACAAACGGCCTATTTT CTATTTTTCAACTTGACGTGAATTGCTGTAACTCCCCAAATACGGTACGA ACCGGATTCCCGTCAAACGAAGCTCCACGTGTGCAGCCTGGGCATCGCCT ATTGTATTTGCTAATGAGCGTGTTTTTGGGCTCTGCAGCTATCGTCGCTC CGATATTGTGTCTTTCGCAATTTTTTCTGGGCCTCGTCGTCTGCTGAAAA AACCAACCAACACAGCTGTAATTATTTCCGCCGGGTGTCTGTAATGTTGT GTGTTGTTAGTAGTGATGTGATTTTTATTTTTCCAAGAATCTAATTTTGA TTTCTATTTCATTTTGGACATATTTGCGCCCATAAGGAGACACTTTTAAG TACAGCAAGATGGAAACATTTCTAGTTGTTTTGTGTGGTGAAATCTTCGT ATTATTGCTCTATTTCAAAGTGCCCAGTATAGGGTCTTACTGCTGCTTCA TGCGCCTTCCAGGCGAGGTCCATGGCTGTCTCGTAAGGCCGTGTCTTTTC ATTCGAAGGTAAACGTCAATTTCGTTTTCGAAAAATCGTTGTGTTTTTGT TCGTAGAATATCTCGCTTGACTGTTCTCTAGCAAACTAATTCTGCGGGTT GTGTCCGAAAATGAAGAGGCTTGTATTGAAGTCAACCGTTACAAATGGTT CAGTCCATCTAATCGAAAAATACAAAGAACTTGGGAAGCATTACACCGCA GATGGCTCCAACACAACACCTATGGAGAGACAGAGTATTCGCTTGGACGA TAGATCTTGCTAGACATGACAGTCTTCGTGTGATGTGAATCGATCCTTTG CTAAGGGGGCTCTAGGATTCAACATCAAGTTGCAATTACAAATATTCCGT TTTTGACAGTTTGTCCGTACCTGGCTTCTTCCAGTTCACACAGTGAGTAT CTGTTTTCCGTCATATCTGGGCTGGTAGTTGTACTTGAACCACCTACATG ATGCACAGATGATCGAAAGCTACAACTCGGGCTACATTTTGTTGCGCCAG CGGAGGTAGTGCAACTGTCATGCTCACGATGGACAGACAGTACTCCGTAC CTTTATCGCTCGTTTGCAATTCACCGCGTTTGGTCCAACGCGTTGGGGCC TTCGTCCTGCTTGGTCGATATGTCTTCCAAGCACATGTGCACAACGACCA TCTTGTTTAGTAGAAAGTCCTCACAAGACTTTTGAAAAACGCGGCGGAAT AGTTTTGCAGAAAACGAGAAAAGTCGACGAGTGGTAAACGGTTTATTCGA CTTATCATGAGCTATTTCGTTTATCCGTCGTTCGATAAGACACGGCGTGA GGCCGTGTCCTAGTGCCGGACGAAGACGCGCAAAGAAACGCCGAAAGCGC GTTTTCCAGGGTTTTTTTTTTCGAGACCATGACGTAATGCCTCACTAAGT CATTCCAAGGAGACGCCCAGCACCTCTATGCGTGGCCACAGTTCACTAGA ACATGGTTTGCGTTGATTCTGTGCTATTGGTTCGATATTATTGGAGCAGC AACGATTACCGTGAAAAAATCAGCGCATTATGTTCCGAAATATGTGCAGG TTGCCTAACGCAAGGGTTTTTGTTGCCTGTTGCTGTCATACACAAGTATA TCTTGTCAAGTACTCGAGAAACTCAACAATCGTACGTGCTTGACTATGTA TGAGGTACCGTTCCGGTTATCAAGCATTGTTCTGGAGGCCAGTGTAGCTA TTGCGTTGAACGTTTAAACCAATTGGAGTTGAGTTTTATTCGTTTTGTTG GTCGTCGCTAGACTCTTTTTTCACATGTCATTTTCTCTCGGACCCTCTCG ACACGTGGAGGGGGAAACGGAAACGAAAACGTTTCGTTTCGATTCTTCCG GTTGTCTTCGCATTTTTTTTTGTGTAAAACAGTTAGCACACAACTCTGCC GTCGACGTCTCTATCCACAGATTGACAAGCGGAGCAGAACCTTTCGCATA ATGTACCAACATATCAGCCCCATGGGTCGTGCCAATTGGGGGGTGCTGGC ATGGCCTGTGGTCATCGCTGTGACAATGTTTGTGGTGGGCGTTCGTGCTG AAGCCTTTTTCCGAAGGATTTTGGCCGCGAAGAAATTCCTTATTTTTTCT CTCCGAAACGATATCACGGGGAAAAGCTTGAATACGAACACTCGCCGGCA ATATTTTCACCGCAACGGCCACAAACCACGCCAGTATCTCTCACTTAGCA TGACTCATGAATTAGCGTGTCAGCACATTCATGATTCAAATGATTCTGCT CCGATTATCAGTCTGTGGATCTAGACATCGACGGCAAAGTTTTTGCGCTG ACTGTTTTGCACGCAAACCTGCCAAAGGGCGGGAAGAAACATCTGCAGGG AAGTGCTAAATGCGCGTTTTCCAGAGAGCACTTCCCCCCTAATTATGAGG CCATACGAACTGGCCTAATAAATTAGACGCTGATTGTTTTGTACACTTTT TGTTTCCTCCCGAGGGTTTGTTCGTGTTCGTGAAGAATCTCCGAACAGGA TATGGGTTTGTTCCCTTTGACGGATGCACACCAAATCACCGTTATCATTA TTTTCATTTCTGCGTTGGTTTTCGTTTCTTCCAGTTTTTTTTTGTTTTTT TTATGAAAAAAAAACAATACGAGGATAATACCAACTCGCATGGGATCCCC CTCCGTCACCTTTGGATGCTGGATTTCATATTGCAATTCTGGAAAGTACC AAAAGCTTTTATTTTAATGCAGCAAATCCAGGCGAGTCGCAATTTTCCGG GAACGAAGTAACGACCAAGGCCACGGTGTTGACGTGGATGGCGAAGGATT GCAATGTGAGCGGGAGAGCTTCGCTATCCCCTCTACATGTACATCAAAAC GTTGCTTGAGTCTTTTCCTGGGCAGCATATACTTGGTTTGGGTTCAATCC CTTTCCAAATCGATGGAGAGCCCATGTTTTCTGGTCCTATTTTCTATTTT TAATTTGACCGGAATGGCTGTCATTCCCCCAGTATGAACCAGGTCCCCGT CAAACAAAGCCCGAGTGCCGTTGAGCATGGCCTACCGTCCCACCTGATAC GCGTGTCGTGGGACTCTCTGTAGCTGTCAGTTCGCGCATGTATTTTGTAT TGTCCTTTTTTTTTCTGGGCCTGGTGTCCTTTTGAAAGGGTGAACCGACG TGTTCCTGATTGTTTTTCATCGTATCTGTGATGCTGTGCTTTTCCAAGAA TTACATCAATTTTTGGTTTCACTTTCGACATTTTCTTCGTCCATTTGTAC ACGGCCTAACGAACGCACTCCCTTTGCAAGCTTTTGTTTTTATTTTCAAA CAACGATTGTTGGGGGCATGGGGATATTTGATGAAAAAAAAACGTACAGC TTTTAGCGGTTTTGCCGGCAAGACAGATGTCTGCCTGGCGCCAAAACTTC ACGCGAGCGTACGTATGAGTGGAAGTCGCCGCCGACCTAACCCGACCGTT CTGCGGAAGTATTTCCCATGTGATACATCTGTTAGGGGAATGAAGCACGC GATTTCACACGGTACGCTAATAACATCCCGGTATGTTTCTAACCCAAAAT ACCTTGGTGACTAGTGGCGTACTGCAAAAGTCTCGAAATATTAAATTGCT AAGATACCCGCTCGCCCCTGTATCTCTCTGCTTCTCATCACGAGAGGAGA TAATGAGGGAGAAGCTGTCGTAGCACCCCAGTCAGTTGCGTTCTGTTTGC CGGATCGGTTGAATGCAGAGCTCGGATCATGCGGTATGTCGTCTGTGGGC TGTCGTTCTTGGCGATATTTATGTTTTTAGATGAGTTTTATATGGCAGGA GTTTTGTTGGGAGAGTGTTTTTCTTGGTCGTCACTTCTGGCCGGGAAGAA TAGAAGATTTTTTTTTTGTGTGCAAGTTATGACCGAGCCCGGAGAAGATA TATCGGTCAAAAATAAATCGATGGTGGAGTTTGGGAAGAAACACATTTAC GCGTCATGCATGTTTCGCCACGACGAGGTATCCACGTATGCTGACTATTC CTTACTCGTGTTACGGATGGGCTTTGGCCCAGGCTTGTCGTTCTTCAGAT CAAACACGATATACGCATACTATATATCATCGGTCGGTTTCGCGAAGCGT GCTTCGAGGTGCAGGCGGGGTGGATTTTGGATTTTCATCACTGTAGCCAT CGTGATCCATGACGACGGCGGCAGCATGGGACATCGTTGCAGCAGCAGCT GAAGGTCGCCATCGCGGCCCAGCGATGGAGACTCTAGGTACTGCTGCAAG GCTGCAATCCTTAGGAATTTTGTCCCCCCCTGCAAAACCCATATTTGAGC GGGTCTGGAGAAAATGGGGGTAAGTTTCTCGAAAAAAACTTCTCGATAAC TTGTACTAAACAAATCGGGGCGAAATTGGCCAAAACATTCTTCTGAAAAT ACAAACTTCTGCCATCGGAAGTGGTCTAAGTTCCCCAAATACCCTGATAC GGATTCTTATGTAGTTGCCCTGTACTAACCTAACAGATTGCTTTTTAATC TCATGCCTCCGCGTCATGCACGGTGTACTATGCCACATAAATCTCTGATA GGTGAAGTGCATCGGGAATCATGACGGCAGCGGGTGCTCCATGTGCTTGA GGAAGGGCTTGGTTTGCGTGTACAGCGCCAAGAAGAAGCCTGGACCAAAG TCTCGAACAAATCATGATGAGGGCGAGGAAGAAGGTGACATTTCTGCCGT GGTGTGCCGTACCACCCTCCAATTGACAGCACATTTGACTTCGACGCAAA GAACATTTCCGTAGTGATGGTTCTCGAGGGTTGGCAGGGCGTTGTTTACT GTACCTACTGTCCATTAAAAAGCGTCTCCACAGTAGGTTCTTGTCTTGGT CAATGTATCCGAAACCATATCACCGTATGTTTTTGATGATGTGAAGGCAT GGCTTCCTGGCGTCCCCCTCAATATGTAATGCTTTTTATCCTCTTTCCCG GTTTTGCCTTGTTCGTCTGCACATCTGATCATTTTCCCAAAATGCCATCA GGCACCAACATGCCATCTGTAGCAGCCTCGACGACGGCGTATGCCCACAG CAATTTCTACGCAGGCGGACGCAGCAGCAGTTTTGACACCGAAGATGGCG GGGAGGTGTACCTTCAATCGTCCGAGCTGTATCTTGCTCCTGACCACCTG GGGACCCCTAGGAAAAACGCCCAAGAGCATGACCTAGAGACACCGAACAA GAAGGCCCGAACTCGAGCTCGGCGTGAGGTGCGGAAGGGACAGAGGAAAC AGAGTACGGGCGAAGCGGCCACGTTACAATATGCCTCATATTTTGTTTTG GTTGCGAAGATGAAAATTATCCAGTGTGTGTATATTCGTTGCTAATTGTT GGCGACTTGAACGCTTCCAGAGTTTCCAAACTTTTTTTCTCTCCTTTTCT CACGCTATTAATTGGTGAGCAAGTTAATTTGACCCGCTTGTACAGCGCCC TGGACTGGAATATGGCGTGTAACCTGGCCGCCGGCGCTGCCGTTGCCGTC GAGTGCGTGACCGCCCGAGAACCGAATGCGAGATCTACCCCTCTTGCTGA TGTATGCTTCAGTGGTCGCCTCCAGAAACTTAGTCCAGTTTGATGTCCTG ATGGAAGGTTTTGCTGAATCTTATGGGTAAAACCCATGGTGCTGTATAAA TATTTCACTTGAACGTGTACGTCCCATTCCCTTGCCGTTTCTCTCCAACG CGTACCCAACACACTTGGCAGCAGCAGCAGGTACACAGCGGCGGTGGCGC GCCCGTGACGCCCCCGTCTTTATGTCGTTCGGCGCAGTATTCAACACAAA ACCCGTACAGACCGTCGTCCGCGATGAGGTTTTTTGATTGCATTGAAGGA GGCGATGATCGCACGAGAATTCTCCGACAACAGCGGCACCAGCAACAGCG GCACCAGCACCAGCAGCAGAAGCAGCAGCAACAACAACGACAACAGCAGC AGCAGCAGCAGCAGCAGCAACATCAACAACAACAAGTGCGTGTTTCGGTG GGTGTCGGAATGGCAAGCATGGGCGTCGCTGACAGCAGCAGGGGTGCCGG GAGGACGCCGCTGACGCTCCTGGATCCTCGCGTTACTCTGTGCAGTCCCA CTGGTCGTGGGGGGACGGGGAATCTCTTGCCGTTGAATGGCGATGTGAAA GGCGGCAGCAGGACAGGGTCTCGCGGTGCGTTTGCCTTGTCCCAGGCAGA CCGAGGCGGCCCGGTAACACCACCGTCGGCCTATCGGCCGGCACCACATG CCCCATATTACCAGCACGGACCATCAGCGATGTCTCACGGCTGTGAGCCT GCTGTCGCTAGGCGTCGCGCGAGCGCCGATTTTGTCAGACAGCGACCGTT TAATGATCCGCCGGTTGTGGGGATGGGGGGCGTGACCGGTGGCGCGGCCG CGGGGCTGACTTTTTCCGATTCGATTGCGGGCTTGATTAGTCCAAACGAC GGACCACCGGGAGAATTTTTGGGTCTGGATGAGGACGGGCAGGATAGTGG ATTGGGGTCTCAGATTGCGGATCTCCTCCGGGATCAGGTTAGTTAGTGGA GTTCCTCTTTATTGTGTGTGTTCATTCGTTCCTGAAAAATGAAACCTACC GACGAAGCGAAAGGAGAGCACGATACTCACAGGAAAGACTGGCTCTCGAG AAGACACCGCCGGTTCGACCGGTTGGTTCCGAATCTTGGGATGTAGTGCG GAGCATGCTCTTGGGTTTTGCTCTGTTGTTGATAAATTAGCCATCCGTGG TTGGAAGCAGCGAGAAAATCTGTTCCGAGAAAGGGACAAACCGTCATTGG TTGTTGTGCAGGAGATTGGGGTTCAGGAACCCCGTGGAACGTCAGGAACG TGCTCTCCACATTTTTCTCTGTGATCGTGTTTTCTGAGAAGATGGACTTT GGATCTGGTAGTCGTAGTACAGTGAACGCTATAATTGAAGATGATCATGT AGTTCTGTAAACCTGAATCTGAGAGCCAGGATGTCGTTTCGTGGTCGTTC AACAAAATTGTTTGGGATGCTGCCTGGGGTCAGCGCTGTCGATGTGGTCT CTCGTGATATGTATGTAACTTACGTTCCAAGTGAGATAATTTTCTGTGGT ATTTTTTCTGTCATGCTTACCAAAACGTCTCATGTTTGTCCTACGGTCGC GCCCTCTCCATGATGTCCTTGTACATGTTTCATTACGAACCAAAAGGCCA TTGAGCTCAGCGAGTCGGATGGCTCAACCGTGTGCAGCTCCGACGATGAG GTGAGGTCCGGTCAAGACGCAACGAGGACGGTTGGGGATCCCATAAGTAG GGAGTGATGTGTTTTTTGTGGGTTACCCCACTTTCTACCTACATCGTCGT CGTCGTCAATCGGTAAGACTGGACACAGGGCATCACCCTCCGGACGAATA TAGATACTTGAAATAGTCTCGACGAAGGTTTCAATTTTTTGGGGCCGGAG TTTTAGGATATGCGGGCACGTTGAATGGAGCGTTTGGCCCTGTTTTGTTC GCTATAATAGTAGTCGGGGGCACTTGTAAATGGGCCAGGGCACTTTGAAA AAACGTACTTATGCTGAACCTTGAGGCAAATACTTGAAGAAAGAAGAATT TGTTTAAAATGTTTGAAATGTTGGTATTCATCCGGGGGTGTGCAAGATAT AACCTTACTTTGATCCTTAGACGGCCGAACTCGGATTGATCCCTCGGAGT TGAAAGTAAGTGCATCGATTTCTACTCTGGAATATATGTGTGGAATGAAA TGCGATAATTGCTGTGCAAAAGCTGACATCTGACTTGTGCAGCATGGCTA ACTTCCTCAGCAGCGTTGTGTTTCAGGTGCCGGTGGTGTGCTGAATCTCT CCAAAAGCACCTTTAAAACAGAAATTAAATTGGTTTACGTGTTATCCTTG TCGTTGGCATGAGTTTTGTTTTCTTCCCCCCCCTCCCCCCTTGTTGTGGT CTGTTGTGTGCTTTGTCGTAGAGCGGAAAGGGGTGCTATCGGAGAAAGCC GACGATGGAACCACTCGATGGGTCCGGTCTGATGCCCCTGCGGAAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4809:1285..14430+

>mRNA_H-paniculata_contig4809.11894.1 ID=mRNA_H-paniculata_contig4809.11894.1|Name=mRNA_H-paniculata_contig4809.11894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2736bp|location=Sequence derived from alignment at H-paniculata_contig4809:1285..14430+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCAGCCCCCTAATGTGGCGGTTTCTTCTATCAGAAGGAACTGCGA
CTACTGCGTCCGCAAGAAGATGGCGCAGCCCCCTAATGTGGCGGTTTCTT
CTATCAGAAGGAACTGCGACTACTGCGTCCGCAAGAAGTGCATCGGGAAT
CATGACGGCAGCGGGTGCTCCATGTGCTTGAGGAAGGGCTTGGTTTGCGT
GTACAGCGCCAAGAAGAAGCCTGGACCAAAGTCTCGAACAAATCATGATG
AGGGCGAGGAAGAAGTGCATCGGGAATCATGACGGCAGCGGGTGCTCCAT
GTGCTTGAGGAAGGGCTTGGTTTGCGTGTACAGCGCCAAGAAGAAGCCTG
GACCAAAGTCTCGAACAAATCATGATGAGGGCGAGGAAGAAGGCACCAAC
ATGCCATCTGTAGCAGCCTCGACGACGGCGTATGCCCACAGCAATTTCTA
CGCAGGCGGACGCAGCAGCAGTTTTGACACCGAAGATGGCGGGGAGGTGT
ACCTTCAATCGTCCGAGCTGTATCTTGCTCCTGACCACCTGGGGACCCCT
AGGAAAAACGCCCAAGAGCATGACCTAGAGACACCGAACAAGAAGGCCCG
AACTCGAGCTCGGCGTGAGGCACCAACATGCCATCTGTAGCAGCCTCGAC
GACGGCGTATGCCCACAGCAATTTCTACGCAGGCGGACGCAGCAGCAGTT
TTGACACCGAAGATGGCGGGGAGGTGTACCTTCAATCGTCCGAGCTGTAT
CTTGCTCCTGACCACCTGGGGACCCCTAGGAAAAACGCCCAAGAGCATGA
CCTAGAGACACCGAACAAGAAGGCCCGAACTCGAGCTCGGCGTGAGCAGC
AGCAGGTACACAGCGGCGGTGGCGCGCCCGTGACGCCCCCGTCTTTATGT
CGTTCGGCGCAGTATTCAACACAAAACCCGTACAGACCGTCGTCCGCGAT
GAGGTTTTTTGATTGCATTGAAGGAGGCGATGATCGCACGAGAATTCTCC
GACAACAGCGGCACCAGCAACAGCGGCACCAGCACCAGCAGCAGAAGCAG
CAGCAACAACAACGACAACAGCAGCAGCAGCAGCAGCAGCAGCAACATCA
ACAACAACAAGTGCGTGTTTCGGTGGGTGTCGGAATGGCAAGCATGGGCG
TCGCTGACAGCAGCAGGGGTGCCGGGAGGACGCCGCTGACGCTCCTGGAT
CCTCGCGTTACTCTGTGCAGTCCCACTGGTCGTGGGGGGACGGGGAATCT
CTTGCCGTTGAATGGCGATGTGAAAGGCGGCAGCAGGACAGGGTCTCGCG
GTGCGTTTGCCTTGTCCCAGGCAGACCGAGGCGGCCCGGTAACACCACCG
TCGGCCTATCGGCCGGCACCACATGCCCCATATTACCAGCACGGACCATC
AGCGATGTCTCACGGCTGTGAGCCTGCTGTCGCTAGGCGTCGCGCGAGCG
CCGATTTTGTCAGACAGCGACCGTTTAATGATCCGCCGGTTGTGGGGATG
GGGGGCGTGACCGGTGGCGCGGCCGCGGGGCTGACTTTTTCCGATTCGAT
TGCGGGCTTGATTAGTCCAAACGACGGACCACCGGGAGAATTTTTGGGTC
TGGATGAGGACGGGCAGGATAGTGGATTGGGGTCTCAGATTGCGGATCTC
CTCCGGGATCAGCAGCAGCAGGTACACAGCGGCGGTGGCGCGCCCGTGAC
GCCCCCGTCTTTATGTCGTTCGGCGCAGTATTCAACACAAAACCCGTACA
GACCGTCGTCCGCGATGAGGTTTTTTGATTGCATTGAAGGAGGCGATGAT
CGCACGAGAATTCTCCGACAACAGCGGCACCAGCAACAGCGGCACCAGCA
CCAGCAGCAGAAGCAGCAGCAACAACAACGACAACAGCAGCAGCAGCAGC
AGCAGCAGCAACATCAACAACAACAAGTGCGTGTTTCGGTGGGTGTCGGA
ATGGCAAGCATGGGCGTCGCTGACAGCAGCAGGGGTGCCGGGAGGACGCC
GCTGACGCTCCTGGATCCTCGCGTTACTCTGTGCAGTCCCACTGGTCGTG
GGGGGACGGGGAATCTCTTGCCGTTGAATGGCGATGTGAAAGGCGGCAGC
AGGACAGGGTCTCGCGGTGCGTTTGCCTTGTCCCAGGCAGACCGAGGCGG
CCCGGTAACACCACCGTCGGCCTATCGGCCGGCACCACATGCCCCATATT
ACCAGCACGGACCATCAGCGATGTCTCACGGCTGTGAGCCTGCTGTCGCT
AGGCGTCGCGCGAGCGCCGATTTTGTCAGACAGCGACCGTTTAATGATCC
GCCGGTTGTGGGGATGGGGGGCGTGACCGGTGGCGCGGCCGCGGGGCTGA
CTTTTTCCGATTCGATTGCGGGCTTGATTAGTCCAAACGACGGACCACCG
GGAGAATTTTTGGGTCTGGATGAGGACGGGCAGGATAGTGGATTGGGGTC
TCAGATTGCGGATCTCCTCCGGGATCAGGCCATTGAGCTCAGCGAGTCGG
ATGGCTCAACCGTGTGCAGCTCCGACGATGAGGCCATTGAGCTCAGCGAG
TCGGATGGCTCAACCGTGTGCAGCTCCGACGATGAGAGCGGAAAGGGGTG
CTATCGGAGAAAGCCGACGATGGAACCACTCGATGGGTCCGGTCTGATGC
CCCTGCGGAACAGCGGAAAGGGGTGCTATCGGAGAAAGCCGACGATGGAA
CCACTCGATGGGTCCGGTCTGATGCCCCTGCGGAAC
back to top