prot_H-paniculata_contig48061.11892.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig48061.11892.1 vs. uniprot
Match: A0A834W4R7_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W4R7_9FABA) HSP 1 Score: 51.2 bits (121), Expect = 4.050e-5 Identity = 28/77 (36.36%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 47 VWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMSGDGSTLVADLVGKLDLIFHSSTDVPATLEVSYLPEVNFNLFSL 123
W +DSGA+NH+TNDLS + +++P G + V +GS L +G +LI +S T ++ ++P+V+ NL S+
Sbjct: 63 AWFADSGATNHLTNDLSNLQ-VKQPYDGGEQVHIANGSGLAITHIGNSELISNSKTF--RLNQILHVPDVSKNLLSI 136
BLAST of mRNA_H-paniculata_contig48061.11892.1 vs. uniprot
Match: A0A0J7KFP4_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KFP4_LASNI) HSP 1 Score: 51.6 bits (122), Expect = 4.390e-5 Identity = 33/95 (34.74%), Postives = 53/95 (55.79%), Query Frame = 0
Query: 33 VALTNQNPTINNGNVWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMSGDGSTLVADLVGKLDLIFHSSTDVPAT----LEVSYLPEVNFNLFSL 123
+ +T++ PTINN +VW++DSGAS+HMT+ L E V G+ + A +GK ++ F + T +V Y+P+++ NLFSL
Sbjct: 153 LTVTSEWPTINNKDVWLADSGASDHMTSREEWFTKLESVGDRERPVTLGNNKVIFA--IGKGEIQFEARVADKITKYTMADVLYVPDISRNLFSL 245
BLAST of mRNA_H-paniculata_contig48061.11892.1 vs. uniprot
Match: A0A5N6LS31_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LS31_9ASTR) HSP 1 Score: 50.8 bits (120), Expect = 7.030e-5 Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 48 WVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMSGDGSTLVADLVGKLDLIFHSSTDVPATLEVSYLPEVNFNLFSL 123
W+ DSGAS+H+TNDLS + L P G + ++ GDGS+L +G L L F+S + + + V +P V+ N+ S+
Sbjct: 159 WLFDSGASHHITNDLSAL-SLHAPYDGTEELVIGDGSSLKITHIGSLSLTFNSHSLLLTS--VLCVPLVSKNIISI 231
BLAST of mRNA_H-paniculata_contig48061.11892.1 vs. uniprot
Match: A0A5N5J6G7_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5J6G7_9ROSI) HSP 1 Score: 50.8 bits (120), Expect = 8.230e-5 Identity = 34/91 (37.36%), Postives = 47/91 (51.65%), Query Frame = 0
Query: 33 VALTNQNPTINNGNVWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMSGDGSTLVADLVGKLDLIFHSSTDVPATLEVSYLPEVNFNLFSL 123
+A +N PT W+SDSGASNH+T+DLS M D G+D V G+G+ L G + SST A + + P + NL S+
Sbjct: 321 IASSNNQPT-----TWISDSGASNHITSDLSNM-DAHNEYHGKDHVDVGNGAGLTIANTGSSKITCGSSTF--ALKNILHCPSIAANLLSI 403
BLAST of mRNA_H-paniculata_contig48061.11892.1 vs. uniprot
Match: A0A151SCF9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SCF9_CAJCA) HSP 1 Score: 50.4 bits (119), Expect = 8.570e-5 Identity = 25/77 (32.47%), Postives = 44/77 (57.14%), Query Frame = 0
Query: 47 VWVSDSGASNHMTNDLSKMYDLRKPVAGEDVVMSGDGSTLVADLVGKLDLIFHSSTDVPATLEVSYLPEVNFNLFSL 123
+W DSGASNH+TND+S + ++ G+ V+ GDG++L+ +G + S + + Y+P ++ NL S+
Sbjct: 13 MWYPDSGASNHLTNDISYL-STKQEYQGKQRVLVGDGNSLLISHIGHSKMHTAQSNITFSLPNIMYIPNISKNLLSI 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48061.11892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig48061.11892.1 ID=prot_H-paniculata_contig48061.11892.1|Name=mRNA_H-paniculata_contig48061.11892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bpback to top |