prot_H-paniculata_contig4799.11876.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4799.11876.1
Unique Nameprot_H-paniculata_contig4799.11876.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length192
Homology
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.710e-21
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   27 AEREDRDEPCVKRTRCVYPGKDYGASAWATMLR------CDSLADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVLAVLQVLSRG 127
            +E E+ D   +KR R VYP KDY  S WA  L+       D + DP S  ARRFR  FR+P+ FF+ LV+L +++ WF +   D +GR GIPV+LKVLA LQ+L+RG
Sbjct:   64 SEEEEEDNREIKRRR-VYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARG 169          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A835ZAS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.640e-18
Identity = 51/103 (49.51%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   20 AIAAVEKAEREDRDEPCVKRTRCVYPGKDYGASAWATMLRCDS-LADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVLAVL 121
            A  AV   E  D   P  KR R VY   DY  +AW TML  ++ L DP S EA++FRRRFR+P+  F  LV+L  EK W   A  DVAGR  IP+ELKV   L
Sbjct:   18 AQLAVVARELLDDSTPRRKRCRRVYERPDYRRTAWMTMLDNEAQLLDPTSREAKKFRRRFRLPYPMFKELVALVREKGWLPCADADVAGRPCIPLELKVHCTL 120          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 5.640e-17
Identity = 52/109 (47.71%), Postives = 62/109 (56.88%), Query Frame = 0
Query:   24 VEKAEREDRDEPCVKRTRCVYPGKDYGASAW---ATMLRCDSLADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVLAVLQVLSRGTV 129
            +E    +D     VKR R VY  KDY  S W      LR     D  + EARRFR  FRVP+ FF+ LV L  ++ WF +   DV GR  +PVELKVLA LQ+LSRG V
Sbjct:   80 LELDTEDDEASREVKRRR-VYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNV 187          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A835ZBP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBP5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.770e-16
Identity = 49/97 (50.52%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   23 AVEKAEREDRDEPCVKRTRCVYPGKDYGASAWATMLRCDS-LADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVL 118
            AV   E  D   P  KR R VY   DY  +AW TML  ++ L DP S EA++FRRRFR+P+  F  LV+L  EK W   A  DVAGR  IP+ELK L
Sbjct:   85 AVVARELLDDSTPRRKRCRRVYERPDYRRTAWMTMLDNEAQLLDPTSREAKKFRRRFRLPYPMFKELVALVREKGWLPCADADVAGRPCIPLELKPL 181          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A835YZ80_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ80_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 8.040e-16
Identity = 50/100 (50.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:   23 AVEKAEREDRDEPCVKRTRCVYPGKDYGASAWATMLRCDS-LADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVLAVL 121
            AV   E  D   P  KR R VY   DY  +AW TML  ++ L DP S EA++FRRRFR+P+  F  LV+L  EK W   A  DVAGR  IP+ELKV   L
Sbjct:  752 AVVARELLDDSTPRRKRCRRVYERPDYRRTAWMTMLDNEAQLLDPTSREAKKFRRRFRLPYPMFKELVALVREKGWLPCADADVAGRPCIPLELKVHCTL 851          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.000e-10
Identity = 46/99 (46.46%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   35 PCVKRTRCVYPGKDYGASAWATML------RCDSLADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVLAVLQVLSRG 127
            PC + TR      DY +SAW   L      R      P S EA+ FR  FRVPH FF   V L   +  F +A  DVAGR  +P+ELKVL VLQVL RG
Sbjct:   30 PCDRETR---ERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLV--RTVFPTATRDVAGRQCVPLELKVLGVLQVLGRG 123          
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.780e-10
Identity = 44/95 (46.32%), Postives = 49/95 (51.58%), Query Frame = 0
Query:   39 RTRCVYPGKDYGASAWATML------RCDSLADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHSAACDVAGRAGIPVELKVLAVLQVLSRG 127
            RTR   P  DY  SAW   L      RC       S EAR FR  FRVP+ FFL  V +      F +   DV GR  +P+ELKVL VLQVL RG
Sbjct:  129 RTRESRPRPDYNKSAWGLRLAQMESLRCSHNLAQHSREARAFRADFRVPYEFFLEFVEMVRPV--FPAREHDVCGRLCVPLELKVLGVLQVLGRG 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4799.11876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE1.710e-2148.60Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAS0_9STRA4.640e-1849.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JPH7_9PHAE5.640e-1747.71Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBP5_9STRA1.770e-1650.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ80_9STRA8.040e-1650.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6H5JV45_9PHAE1.000e-1046.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0H2_9PHAE2.780e-1046.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4799contigH-paniculata_contig4799:11672..12831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4799.11876.1mRNA_H-paniculata_contig4799.11876.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4799 10055..13727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4799.11876.1 ID=prot_H-paniculata_contig4799.11876.1|Name=mRNA_H-paniculata_contig4799.11876.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp
MEEEDRRIQLLGARALSDAAIAAVEKAEREDRDEPCVKRTRCVYPGKDYG
ASAWATMLRCDSLADPFSSEARRFRRRFRVPHMFFLGLVSLAEEKRWFHS
AACDVAGRAGIPVELKVLAVLQVLSRGTVLMTFLRCPSWASRQRKQHFTS
SARTFRQSCSMSISSCRRGRLSRRLCMSMAAWGSPGPSACN*
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