prot_H-paniculata_contig11849.1187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11849.1187.1
Unique Nameprot_H-paniculata_contig11849.1187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: K3WJK4_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJK4_GLOUD)

HSP 1 Score: 54.3 bits (129), Expect = 4.050e-7
Identity = 25/44 (56.82%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            V+YL  +K++ + LGN GL+LT++LGRL++T+FLG LRD EVE+
Sbjct:   33 VIYLVTSKISVLILGNAGLVLTMLLGRLVKTLFLGTLRDAEVEL 76          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 7.570e-7
Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            VV+LT NKLAQ ALGN  +++ + +GRL+  +FLG LRDIE+EV
Sbjct:   32 VVFLTTNKLAQAALGNWAIVMAIGMGRLVSMLFLGPLRDIEIEV 75          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A8K1F9S9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1F9S9_PYTOL)

HSP 1 Score: 53.5 bits (127), Expect = 7.580e-7
Identity = 25/44 (56.82%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            V+YL  +K++ + LGN GL++T++LGRL +TIFLG LRD EVE+
Sbjct:   33 VIYLVTSKVSVLILGNAGLVVTILLGRLFKTIFLGSLRDAEVEI 76          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A7S0EA23_9EUKA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EA23_9EUKA)

HSP 1 Score: 51.2 bits (121), Expect = 9.520e-7
Identity = 24/42 (57.14%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    3 VYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVE 44
            +YLT NKL+ +ALGN  LMLTL++G+L++ +F G+LR+ EVE
Sbjct:   40 IYLTSNKLSLLALGNEALMLTLLVGQLVKALFFGRLREAEVE 81          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.420e-6
Identity = 25/44 (56.82%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            V+YL  +K + + LGN GLMLTL++GR ++TIF G+LRD+EVE+
Sbjct:   35 VIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVEL 78          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A2P4Y3R8_9STRA (Sphingomyelin phosphodiesterase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3R8_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.600e-6
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEVRRTQETGSI 54
            ++YL  +K++ + LGN GL+LT + GRL+++ FLG LRD EVEV   +E   I
Sbjct:  225 IIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVEVVAARECPEI 277          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A2D4C243_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C243_PYTIN)

HSP 1 Score: 51.6 bits (122), Expect = 3.630e-6
Identity = 23/44 (52.27%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            V+YL  +K++ + LGN  L+LT++ GRL++T+FLG LRD EVE+
Sbjct:   34 VIYLVTSKISVLILGNAALVLTMLFGRLVKTVFLGTLRDAEVEI 77          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A484EAA8_BRELC (RING-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAA8_BRELC)

HSP 1 Score: 51.6 bits (122), Expect = 3.630e-6
Identity = 23/44 (52.27%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            ++YL  +K++ + LGN GL+LT + GRL++T+FLG LRD EVE+
Sbjct:   32 IIYLVTSKISLLVLGNAGLVLTALFGRLVKTLFLGPLRDAEVEL 75          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: A0A5D6XXN6_9STRA (Sphingomyelin phosphodiesterase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXN6_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 5.010e-6
Identity = 23/44 (52.27%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            V+YL  +K++ + LGN GL+LT++ GRL++++FLG LRD EVE+
Sbjct:   33 VIYLVTSKVSVLVLGNAGLVLTILFGRLVKSLFLGPLRDAEVEL 76          
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Match: H3GIV4_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIV4_PHYRM)

HSP 1 Score: 50.4 bits (119), Expect = 9.310e-6
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    2 VVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEV 45
            V+YL  +K++ + LGN GL+LT + GRL++T FLG LRD EVE+
Sbjct:   32 VIYLVTSKVSVLVLGNAGLVLTTLFGRLLKTFFLGTLRDAEVEL 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11849.1187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
K3WJK4_GLOUD4.050e-756.82RING-type domain-containing protein n=1 Tax=Globis... [more]
D8LTS9_ECTSI7.570e-759.09RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8K1F9S9_PYTOL7.580e-756.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0EA23_9EUKA9.520e-757.14RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A4D9CLU7_9STRA1.420e-656.82RING-type domain-containing protein n=2 Tax=Monodo... [more]
A0A2P4Y3R8_9STRA3.600e-647.17Sphingomyelin phosphodiesterase (Fragment) n=1 Tax... [more]
A0A2D4C243_PYTIN3.630e-652.27Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A484EAA8_BRELC3.630e-652.27RING-type domain-containing protein n=1 Tax=Bremia... [more]
A0A5D6XXN6_9STRA5.010e-652.27Sphingomyelin phosphodiesterase n=1 Tax=Pythium br... [more]
H3GIV4_PHYRM9.310e-654.55RING-type domain-containing protein n=1 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11849contigH-paniculata_contig11849:7722..7886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11849.1187.1mRNA_H-paniculata_contig11849.1187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11849 7704..7886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11849.1187.1 ID=prot_H-paniculata_contig11849.1187.1|Name=mRNA_H-paniculata_contig11849.1187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
MVVYLTKNKLAQVALGNCGLMLTLVLGRLIRTIFLGQLRDIEVEVRRTQE
TGSI*
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