prot_H-paniculata_contig4798.11874.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4798.11874.1
Unique Nameprot_H-paniculata_contig4798.11874.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length354
Homology
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BLAST of mRNA_H-paniculata_contig4798.11874.1 vs. uniprot
Match: A0A6H5JV62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV62_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 5.110e-71
Identity = 119/142 (83.80%), Postives = 127/142 (89.44%), Query Frame = 0 
Query:    1 AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRLGAYEKLRRTFNAFRLPGQEEHPPYQSFQRLSELCPTCSPTVTLLVKAYQPHIAHLLGSP 142
            AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGR GAYEKLRRTFNAF  PG  E P ++SF  ++ LC +CSPTV+LLVKAY PH+  LL +P
Sbjct:  931 AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFLRPGMFELPGFESFHTITRLCHSCSPTVSLLVKAYMPHLEPLLSTP 1072
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BLAST of mRNA_H-paniculata_contig4798.11874.1 vs. uniprot
Match: D7FM09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM09_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.640e-55
Identity = 97/100 (97.00%), Postives = 97/100 (97.00%), Query Frame = 0 
Query:    1 AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRLGAYEKLRRTFNAFRLPG 100
            AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGR GAYEKLRRTFNAF  PG
Sbjct:  891 AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFLRPG 990
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4798.11874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV62_9PHAE5.110e-7183.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM09_ECTSI2.640e-5597.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4798contigH-paniculata_contig4798:7427..14395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4798.11874.1mRNA_H-paniculata_contig4798.11874.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4798 7427..14395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4798.11874.1 ID=prot_H-paniculata_contig4798.11874.1|Name=mRNA_H-paniculata_contig4798.11874.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp
AHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVM
LALLEPFPGAGRWSLWRHPLHLAACHLAIAGRLGAYEKLRRTFNAFRLPG
QEEHPPYQSFQRLSELCPTCSPTVTLLVKAYQPHIAHLLGSPGERQSQGG
GSSGTGAGAGSGAGGGGSGGMMVGHEVSTFAEMRECSLNNWRIESVRPSL
SADLVLSFFAARHPSAGAAAAAQAAAAQAAEVAAAEAMTATEAAGAAASV
GDVLMSGVADGARMDAVGGGLPLGAGPGIGILGGAVGAVAAVAAGDLFKS
GNDGHNPVGMFGPGTRTMDPYPSDLQMLVEMFGGDQQATTSLATPLDPID
DWIA
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