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Homology
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI) HSP 1 Score: 301 bits (772), Expect = 3.540e-102 Identity = 155/183 (84.70%), Postives = 170/183 (92.90%), Query Frame = 1
Query: 1 GLEMHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLDTAEEE 549
GLEMHGTTILCVRKNGKVVM+GDGQVSQG MVVKPNATKVRKLG G+VLAG+AGSTADALTL+ERLE KLEEH+GQL NACV+LAK+WRTDKYLRRLEAVVLVAD K SL V+GLGDVLAP+GGVIAVGSGQPYAL+AARAL G EDLSAEEVAR+SMEIA++LCVYTN++FT H LD EEE
Sbjct: 27 GLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFTMHSLDVEEEE 209
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A7S2WBX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBX0_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.060e-77 Identity = 126/181 (69.61%), Postives = 145/181 (80.11%), Query Frame = 1
Query: 1 GLEMHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLDTAE 543
G HGTTILCVRK GKVV+IGDGQVSQGSMVVKPNA KVR++G G VL GFAGSTADA TL+ERLE +LEEH GQL ACV LAK WRTDKYLRRLEAV+LVAD S ++G GDVL P G++AVGSG YAL+AARAL + D+ E++A+++M IAADLCVYTN NFT VL+T E
Sbjct: 31 GSGRHGTTILCVRKEGKVVVIGDGQVSQGSMVVKPNAKKVRRMGDG-VLVGFAGSTADAFTLLERLEERLEEHPGQLTRACVDLAKAWRTDKYLRRLEAVLLVADKDVSFELTGNGDVLEPKDGIMAVGSGGAYALAAARALADVPDMDPEDIAQKAMTIAADLCVYTNHNFTVEVLETDE 210
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A6G0WXK0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXK0_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.100e-76 Identity = 123/175 (70.29%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 10 MHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLD 534
MHGTTILCVRKNGKVV+IGDGQVS G +VKPNA KVR++ + V+AGFAGSTADA TL+ERLESKLEE+ GQL ACV LAK WRTDKYLR LEA+++V D K S T++G GDVL PH G+I +GSG YAL+AARAL+ LSAEEVARRSM+IAAD+C+YTN NF VLD
Sbjct: 27 MHGTTILCVRKNGKVVVIGDGQVSLGHTIVKPNAQKVRRI-NDNVIAGFAGSTADAFTLIERLESKLEEYPGQLTRACVELAKAWRTDKYLRALEALLIVTDNKQSFTLTGNGDVLQPHDGIIGIGSGGTYALAAARALIEEPHLSAEEVARRSMKIAADICIYTNHNFVMEVLD 200
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A485LKE5_9STRA (Aste57867_22011 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LKE5_9STRA) HSP 1 Score: 235 bits (599), Expect = 6.760e-76 Identity = 123/175 (70.29%), Postives = 141/175 (80.57%), Query Frame = 1
Query: 10 MHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLD 534
MHGTTILCVRKNGKVV+IGDGQVS G +VKPNA KVR++ V+AGFAGSTADA TL+ERLESKLEE+ GQL ACV LAK WRTDKYLR LEA+++V D K S T++G GDVL PH G+I +GSG YAL+AARAL+ LSAEEVARRSM+IAAD+CVYTN N VLD
Sbjct: 27 MHGTTILCVRKNGKVVVIGDGQVSLGHTIVKPNAQKVRRINEN-VIAGFAGSTADAFTLIERLESKLEEYPGQLTRACVELAKAWRTDKYLRALEALLIVTDNKQSFTLTGNGDVLQPHDGIIGIGSGGTYALAAARALIDEPHLSAEEVARRSMKIAADICVYTNHNVVVEVLD 200
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A4D9D968_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D968_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.610e-73 Identity = 117/174 (67.24%), Postives = 140/174 (80.46%), Query Frame = 1
Query: 10 MHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVL 531
MH TTILCVRK KVVM+GDGQVSQG+ VVKPNA KVR+LG ++AGFAGSTAD TL+ERLE KLEEH GQL ACV LAK WRTDKYLRRLEA +LVAD S ++GLGDVL P GVIA+GSG +AL+AA+AL+ ED+ AE++A ++M IAA++CVYTN+NF T V+
Sbjct: 1 MHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGQ-DIIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVIAIGSGGTFALAAAKALLDREDMDAEQIAHKAMSIAAEICVYTNNNFVTEVV 173
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A5D6XZJ1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZJ1_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.790e-73 Identity = 121/187 (64.71%), Postives = 149/187 (79.68%), Query Frame = 1
Query: 7 EMHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLE----AVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLD--TAEEE 549
+MHGTTILCVRKNGKV +IGDGQVS GS VVKPNA KVR++ + ++AGFAGSTADA TL+ERLESKL+E+ GQL +CV LAK WRTDKYLRRLE A+++V+D K S T++G GDV+ PH G+I +GSG YAL+AARAL+ +L AEE+ RRSM+IAAD+CVYTN NF VL+ T EE+
Sbjct: 32 DMHGTTILCVRKNGKVCLIGDGQVSLGSTVVKPNAKKVRRI-NDNIVAGFAGSTADAFTLMERLESKLDEYPGQLARSCVELAKAWRTDKYLRRLEELRQAILIVSDSKQSYTLTGNGDVIEPHDGIIGIGSGGTYALAAARALIDQPNLDAEEIGRRSMQIAADICVYTNHNFVVEVLEGETPEEK 217
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A067BPT7_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BPT7_SAPPC) HSP 1 Score: 229 bits (583), Expect = 1.830e-73 Identity = 119/175 (68.00%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 10 MHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLD 534
MHGTTILCVRK+GKV +IGDGQVS G +VKPNA KVR++ V+AGFAGSTADA TL+ERLESKL+E+ GQL ACV LAK WRTDKYLR LEA+++V D K S T++G GDVL PH G+I +GSG YAL+AARAL+ LSAE+VARRSM+IAAD+CVYTN N VLD
Sbjct: 27 MHGTTILCVRKDGKVCVIGDGQVSLGHTIVKPNAQKVRRINEN-VIAGFAGSTADAFTLIERLESKLDEYPGQLTRACVELAKAWRTDKYLRALEALLIVTDNKQSFTLTGNGDVLQPHDGIIGIGSGGTYALAAARALIDQPHLSAEDVARRSMKIAADICVYTNHNVVVEVLD 200
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A7S3DAF1_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DAF1_9EUKA) HSP 1 Score: 229 bits (584), Expect = 2.720e-73 Identity = 121/173 (69.94%), Postives = 142/173 (82.08%), Query Frame = 1
Query: 1 GLEM-HGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNF 516
G+E HGTTILCVRK +VV+IGDGQV+ GS V+KPNA KVR+L VLAGFAG+TADA TL+ERLESKLEEH GQL ACV LAK WRTDK LR+LEA+++V D +LTV+GLGDVL PH GV+ +GSG YA +AA ALM +E+ SAEEVARRSM++AADLCVYTNSNF
Sbjct: 48 GMEQYHGTTILCVRKKEEVVLIGDGQVTLGSAVIKPNARKVRRL-PNNVLAGFAGATADAFTLIERLESKLEEHPGQLVRACVELAKAWRTDKMLRKLEAMLVVCDKDHTLTVTGLGDVLEPHRGVVGIGSGGLYAQAAATALMDVEEYSAEEVARRSMQVAADLCVYTNSNF 219
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: A0A484E277_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E277_BRELC) HSP 1 Score: 228 bits (581), Expect = 5.440e-73 Identity = 116/180 (64.44%), Postives = 146/180 (81.11%), Query Frame = 1
Query: 10 MHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVLDTAEEE 549
MHGTTILCVRKNGKV +IGDGQVS G+ VVKPNA KVR++G ++AGFAGSTADA TL+ERLE+KL+E+ GQL +CV LAK WRTDKYLRRLEA+++V+D K S T++G GDVL PH G+I +GSG YAL+AARAL+ +DL AE + R++M+IAAD+CVYTN N VL+ ++E
Sbjct: 37 MHGTTILCVRKNGKVCLIGDGQVSLGNTVVKPNAKKVRRIGE-HIVAGFAGSTADAFTLIERLEAKLDEYPGQLTRSCVELAKAWRTDKYLRRLEAILIVSDVKQSYTLTGNGDVLEPHDGIIGIGSGGTYALAAARALID-QDLDAETIGRKAMKIAADICVYTNENVVVEVLEEGKDE 214
BLAST of mRNA_H-paniculata_contig4792.11866.1 vs. uniprot
Match: W7UCI7_9STRA (Heat shock protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCI7_9STRA) HSP 1 Score: 229 bits (585), Expect = 5.510e-73 Identity = 118/176 (67.05%), Postives = 141/176 (80.11%), Query Frame = 1
Query: 4 LEMHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFAGSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLVADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEVARRSMEIAADLCVYTNSNFTTHVL 531
L MH TTILCVRK KVVM+GDGQVSQG+ VVKPNA KVR+LG ++AGFAGSTAD TL+ERLE KLEEH GQL ACV LAK WRTDKYLRRLEA +LVAD S ++GLGDVL P GVIA+GSG +AL+AA+AL+ ED+ AE++A ++M IAA++CVYTN+NF T V+
Sbjct: 80 LTMHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGE-DIIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVIAIGSGGTFALAAAKALLDREDMDAEQIAHKAMSIAAEICVYTNNNFVTEVV 254
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 300.1 |
| Seed ortholog evalue | 7.2e-79 |
| Seed eggNOG ortholog | 2880.D8LNX4 |
| Preferred name | HslV |
| KEGG ko | ko:K01419 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000002,GO:0000266,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006508,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008233,GO:0009058,GO:0009059,GO:0009295,GO:0009376,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0031597,GO:0031974,GO:0032042,GO:0032991,GO:0033955,GO:0034641,GO:0034645,GO:0042623,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048285,GO:0070011,GO:0070013,GO:0070581,GO:0071704,GO:0071840,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901576,GO:1902494,GO:1904949,GO:1905368,GO:1905369 |
| EggNOG free text desc. | Proteasome subunit |
| EggNOG OGs | 2RS9W@2759,COG5405@1 |
| Ec32 ortholog description | ATP-dependent protease, HslV subunit |
| Ec32 ortholog | Ec-08_005470.1 |
| EC | 3.4.25.2 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002 |
| Exons | 7 |
| Model size | 552 |
| Cds size | 543 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4792.11866.1 >prot_H-paniculata_contig4792.11866.1 ID=prot_H-paniculata_contig4792.11866.1|Name=mRNA_H-paniculata_contig4792.11866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
MHGTTILCVRKNGKVVMIGDGQVSQGSMVVKPNATKVRKLGSGQVLAGFA
GSTADALTLVERLESKLEEHDGQLQNACVSLAKEWRTDKYLRRLEAVVLV
ADGKTSLTVSGLGDVLAPHGGVIAVGSGQPYALSAARALMGIEDLSAEEV
ARRSMEIAADLCVYTNSNFTTHVLDTAEEEN back to topmRNA from alignment at H-paniculata_contig4792:3082..13223- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4792.11866.1 ID=mRNA_H-paniculata_contig4792.11866.1|Name=mRNA_H-paniculata_contig4792.11866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10142bp|location=Sequence derived from alignment at H-paniculata_contig4792:3082..13223- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGCTTGAGATGCACGGAACCACCATCTTGTGTGTGCGCAAGAATGGGAA
AGTGGTGAGTTTTCCCTCCTATTCCTCTCTTTGCTTTTAGTTCTGGTTTT
CACTCACTCTTTTTTTTTTTTTTTTCTGGTTCTCCTGTTTTTTTCTCACT
TTCTCTGACCATATTTGGTAGCCTATCAAGACAGTAGTGAAATGTGTAGT
GCTTGTGTGCCGACTTGTAGTAGTATGGGCCAGCTTCAATGGAGATGTTC
TGCGCGGGGGAACGGTTATTCGTTTTTTGTTTATCGAATGAGTGTACACG
ACTGAGGTTGGAGGTCAGCTGTGTGACCTCCATGGATACGGAGGAGGTAT
GCGCCTCCGCTCCCTCCTCCCGTCCTTTCCCCTCTCCATGTTTTGCATCA
TGTCTGTGTGTGTTCCATATTCGTGTTTAGCCATATAGCCAATGCTCGGC
AAGCATGATGTGAGTAGTATATGCTTACTGGAAGTTGTTTTGGTCGCGCT
ACCACCTACACGTGTTTTGTAAGCATCTTGAGCTTTTTACCTATAATCAC
GCTTCGGAGTATGACATTACTCCATGTATCGGCTCTCATCCCTCTTTTAT
GATATGCTAACGTGCTGCAGATGATCATTTCAAAGCAGTGCTTTTCAACT
CCATGTTTCAAGTAAATCCAAAAGCATTCCTTGTATCTTCATGCAAAGCG
CATCCTCATTCCTTGCGAGTGCAGCAAGGACAAAACGCTGGATCCTGACT
TCAGCAGCGGAGAAGCCGTGACTTTACTATGACTTTAGATCAACACCCCT
ACCACCAGAACACTCCCTGCACGCACGGGGGGCGGGGGGGGAACGCATGC
CGTCGTCTCTCGACCATTGACCTCGCATTCCTACAACGGCGGGACAGAGC
ATCCAGAATTTTCGTCGGCTAGTCAGTTTTTATTCATGATCCGCCTTTCC
GTTGCTACGCCAACCGGATTCTGCCGTGGGGTGTTTGGCATCGCGGGTAA
CCAATTGTTTTGCGCTCGGCAGGCGTGACGGTACCCTCAAGTATCGCACG
GTACTTTGATATTCACGCGCACGTATGAAGAAGGTCACGCCACACAGAGC
AAAGATGTCGCCGAATCGATCGGCGAGGCAAGTATGTCATGAGATGAGAA
GTTGCCGGGCGGAGTGACCCAGCTTTTGGTTTATTTCAGACGCTACCCGG
GCACGATTTGACGTCTGCCAACGCGATCTGGGCCTAGGACATGGGGGTTT
GGGCTAGAGTTAATGACAGTTTCGAGGGTTGATTTGCTCGCGTTAGGGCT
GAGGTAGTAGGTTTTAGGGGGTGTCAATATTGTTGGATGTTCTCGTTACC
TCCTTTTTTTTTTTTTTCTCTCGATTTTTGCCCACATCGACGACATTTTT
TTTTTTTTGACATGACTCGCAATTTGTCTCATATCCCATTCGAGGAGAAG
GCGGCAAGCCCAAAAATCGTACAAGACCATTCGCGAACCGACTTTGTAGC
ATGGCGAATAATATTATCAGGTCATGCGAGGAAGCTGTAACTTTCAAAAT
CCAGCTTGTAAGAGTGTGACAACGGTTTATGCGGATGCTGACTTTTGAGA
AACAGGAAGCTATTGAATTTTTGTGGTCGTTAAGAATTTTCGCGTGGAAG
GCTGGTCATGGTAGGACCATACGAAAACGAAAACAGTACAAGCTGTACAG
GACTATGCGAGTGGCGTCATCTATTGCGTGCAGGTGTCGCGACGCACGGT
TTGTGCCAGCGCTTGGGGGTTGTGTTGTGTGGGAACTTTGGGGGTACACA
CAGCTTTCAATTTCTCAGGATTTGGAAAATGGCAAATTTGATACATATCA
GAAAAAAAACCCCGGATGCATTTGGTCGATATAGTATCGTACTAGTAATA
GTGTAGTAGCTTTACTTATATTATTATTCGGTCCCTTCGCGGATTAGCAA
CATCGGAGCCCGAATTCGGCCACGGAATTATGTTTATTTGTACATTTTTG
GCCTTGTAAATCATAAGAAAAGTTTGGGTACAGGGATAAGGATTGTTTTG
CTTCTTGGTGGACCGTTTTTATGTTTTAATATTTTGTTCTGTTGTTTGTA
TTCACACGACACTAGCACAAGACGCCTCTCCATTGTTCCCTTTGTCGTTT
GTGCTTTCCTTTGTTTTGCAAACTAATGAATATGCCCTCTTCATTGTTTT
TCTCCCTCTATTGTTTTTTTTTTTTTTTGCTTGTCCCTTATGTTTTTGTT
TTTTTTTCTCTCGTAATGTCTCTTATTTTATTTTTTTTCTCTCTTTTTGG
CTTTTCTCTGACGTTTTATTCCCTTCCTTCCTTCGTTTCTAAAGGTGATG
ATCGGGGACGGGCAGGTTAGCCAGGGCTCCATGGTGGTGAAGCCAAACGC
TACGAAAGTGCGGAAGCTGGGGTCAGGTCAGGTTCTTGCGGGGTTTGCCG
GCTCTACCGCCGACGCCTTGACTCTGGTGGAACGCCTGGAATCCAAGCTT
GAAGAGCACGACGGTCAGTCAATCACCCGCCCACCCACCAGTGGTTACAT
TAAGTGGCTGGTTGTGTCTGGTTGGTCCGTTGGGAAATCGGTCGAAGTAG
GTTGATGGTTGGTTGTTGTAGTTCGATGTAGGTATGCGTTTCGCACGTCA
TGGGCGGGTCGTTTGGTTGGTTGATCTGTCGGTCGGTCCCTCAGTTGGTC
GGTATGGGTCGATGTAGCTGTGCATTTTGCGCTTTTGATTGGGTGAGTGA
GTTGGCTGGTTGGTCGATCGGTCGGTTGGCTGGATGCGTAAGTCGCTAGA
TCGGTACGCTTCGCTCCCCCCTCCCCCCCCCCCCCAGCTTCAAGGACCGT
ACCTTTATAAAGGCTCAGCTCATATTGACTGGGAGACCAAGCCTTGATAA
CCCCGAGTGTCGGCTTAGCCGAGCCGGGGTGGCGCCTATCCCGCAGAGGA
AACTCTGTTCTGTTAAAGGAAATGTAGACATGGCCGGGTGAAAGCCTGGA
TATGGAAGCAGCGGACAAGGTTTTTTCCTCAGCCTTCCGGGGGTTAAAAA
ACAAAACAAAAAAAAACCGAGCGTCGGTTGATGGATGAATTTGTTAGTAT
ATCCCTTTATCCATGGTTGAATTTTCTGGTTCTATACATAGGTCGTTATA
ACCATTGTTACAGGTGACTCTTTGTTGTGTAGAAGAGCCCCCTTCACTAC
TCCGATGTGAATTGATCATAGCGCTTTCTTTTTTCAATGGTTTTTCTTTT
TAATAATAGCTGAAAATTATTCAGTATTATTTGGAAATTTCGACCTGCTC
CGGTGAGTATACAAGATTACACGACGCCAGAGTGTTCAAACTCTTCCCCA
TTCCATTCGCGAATATCGTCCTTCGATGATAACGAATTTCGTATAATTTT
TATTCGGTATCTGCAGCGTTTTTTGTTACTCGTGGTGTGGAGTATACCCC
CCTTGATTCGTTCCGTTTGTGGATAATAACTAAAAAATTCAGTAGCCTAA
AGATGCTGAGCATATCTCCGTTTGTTTCACCATTTGTTATTGTCATGTTC
ATGTTATATGTAGTTCAGGCAGTAAGTTGTGCATGTTTTTCTTGTAATTG
GACCCGCTCGTGACTCTATGGTACTTGTTGCTTGTTCCAAACCGTGTTTT
CATAGTGGTGTCGATGCCTTCCTGCTGATGAAGCTGCCCTTGGCAATTGG
CACGTGTGGTGATGTCGCTATGTAGAAGTTGGTGGTCGAGTTGTTTCTCC
TGCGTGCAGAGTATTGCAGGTTGTTGTGTAACTACTGCTTGTTGTTGCTG
TCACGTATCATATATGTATATATGTACGTATGTATTTTATGTTCATTTTT
TTATCAGGCTCGAGCTTGTTACGCGTAAAAATAATACGGAGTATACCCTC
CCCCCCCGTGATTATGCTCAAATGTTCATCCCCGGCGTTAAATACGAATA
CTTGGAGCATTTTACGACGAAACAAAAGAGGTGTGTGGATTTTAGAGTAG
AAGGTCATGTATGTATAACGAAAGCGTTGACTCCTGTTTGTTGACTTTAC
TTGTAGTGTTTGCAGCGGCTCTAGATGGTCCGGGGCACATGAAACATTCA
CGCGTATTCATGCTGAACCTTTCAGGCAAACACAACCATTCGTTTCTATC
GCGAATGCTTTAGGTATAGTCGTTTTTGTCCGGGGAGTGGGAATTTTATT
CGAAAGGGGGGGCGGGTGTTGTACCCTATAAAGCACGATACCTTTCGGTG
CTGTAAGGTACGGTATAGTACATTGTGGTACGTTTTTCGGTACATAGCAG
AAAGCAGCTCGAACGATGTACAGTCTCTCTTTTTGCTTCGGTGGTCGCTC
ACTCCACCTGGTGTGTTTGTTGTTGTGCGTCCTGGTCTCTACTTTGGTAA
CGCTTTTGTCTCACACGACAGGTCAACTACAGAACGCGTGTGTGTCCCTT
GCTAAGGAATGGAGGACGGACAAGTACCTGCGTCGACTTGAGGTATATTA
TCCTTGAAGTAATGAAAAACACAAAACACGCCGGCCTCAATAGACGAACA
CATGTGATGCATGTACTTACGTACTAGATATCCTTATTGCATGTTTAGTG
CGGAACAGTGATGATGATCCGCAGTATTATTTTCTCAGAAATTTCTTGAA
CTGACAAGGGTTGAAAAGGCAAAACTGTGTTGCGGACGAGTGTAGCGAGT
CGCGGAGAGTTGTTCTTCGTAGCGCAAGTCTCAATTGCCTTAATAACGCC
TCCCCCCCCCCCCCCGTTCTATTGCAATTCATTTCACGCCGGTTGCGAAG
AACAGTAAAAAAAATTCCGAGCTACTACTTACCAACTCTACCCCCCTTTT
CACCCTTTGGTCCTTGTGTCTGCGTGATAGGCTGTTGTGTTAGTAGCCGA
TGGCAAGACGTCGCTGACTGTGTCGGGACTAGGCGACGTCCTCGCACCGC
ATGGAGGCGTTATCGGTGAGAGCACCCGCGTCGAGTCGAAGGGGACGAGA
GAAATTTTGGTTATAATCCTTTTCGGGACGCAGCCCCCCGAAATCTATTT
TCTGAGATGTGCTCTTGAACTGTTCTTTTTTTCATGTAAATAGTCGAAAA
TAGGTTATATCAGACCTCGGGGCACAACCCATCGCACATCTGTTTTTGAG
CACACCCAGAGCTAACTGCTTTTGGGCACTTCCTTTGGAACGCGCGCATA
ATTGCTGATTTTCAACACGAATAATATGGATATTAATATTGATCTTATTA
CACATCCAACGACTACCTGGTCATCTGAAACAATGAACTAGGCGGTGGTT
CCTCTTAGCACCAAAATATTGACCCATGACACGGGTCAAGCTGAAAACTG
AAGACAGGGATCGGCTGTATCGTAAGACATGATGCGTACGCACGATCTAA
AAGCAAAAAACAGAAATGGGACTGGAGAGACAAGGAACCTCCCCCTTGAC
TAGGATCAGGCTAAGGGGTCGTTACTTGTTGGATGCGTGAATTCTTCGGG
GATGTTTCGCAAAGGGCTGCGTCTCGAAGAAATTGAAAACGCCGCATGCT
TTTGCGGAACAAGAGGGATGAACAATTGTCCACCCCCCGGACAAATATGA
ATACTTGTAAAGGGTTTCCACCAAAAACTGAAAGTGTTCCACAGCTCGGA
CAAAGGTTTGATTTTCAAGTAATTAACACGCAACGGAACCGTCATCACTT
CATGCTCAGAAGTAGAAATATCTGTGGAGGTGCGCTATTACTCATAAGTC
GAACATTCCTCGCAGGCGTGCAGGATATCCATGCTATCGATTTGTGGGTT
TCGGAAGGCACCAGGTATCCTCGTGCTGGTATAGTTCCAGAATCCGGGAT
ATCCTTCATCGACGAATGAAGGACCTTCGTCCGAGCTGTAAAGTATTCGC
CTGAGTTTCAAACTGAGCTCGTGTATTCCTTGTGCCCCGGATCATCCACG
ACTGCTAATAATTATCGGAAATCGAATGGACATGGGTGGGTAGTTGATTC
TATGTGTCCTCTCATTCTGAAATTCAGGCGAATACTTTTTGTTTTTTATG
ACAACCATTTGCAAGTACTGGTAATTGTTCAGGGGGTGTAAGTGTCACAG
CAAATATTGGGCGCTGCTGCAGCTGGGGTGGGCAGGGCCATGTCAACTGC
TTGTCTATCTTGTAGTTTGTTGGAATCAAAGCACGATACAAATCAGTTAA
AAACTGATGAAATCAGAATTACCAGTAAATTTCACCTCAAAATATCGTCT
GAACAACTGATTTCACTGCAGTTTTTGGGCTCACCCAAAGTCTATATCAC
TTACCTGGGCATAGTCGGTGGGTTGTTTTGCGGATTGACTGGCAGTGGGT
GCACATGTGTTCTGCTGCCTGTGCAGACTGGCTTGTCTTAGGGCAGCGCC
TTTCTAGCCTCTTCGTTATGCCATTTAGCGCCCGTTTTTGACTGTATGGG
AGGTTTCAGATGGAAACCTGCACTAGAAGAGTTGAGGTGTCGTATGTCGG
AGATCTTTTGGCTGGCGATTTGACAGTTCTCTGCTGATGAGTGTGTACAA
GTTCAGATTGAAGTCAGCTGCGAAGTGTCAACGTGGATACAATGGAGTTA
TAATAATATGAGGTTCAGAGCTATAGTTCAGCTGACTGGGGCAGGGTGAT
TTTACTACAATACAGAGAATTTCAGTTCGCAAAATGGAGAGTTGTTTTCA
ATTTTTGCTGATGTCAGTCGTTGATATCATATGAGGAATAGTGGACGATT
TTTACGTAGATTGCACATGCGAGTGATACATGGGTAGTCCCCTGTGAAGG
TTGCTGTAGTCCATGTCGTGCGTGTTCGAAGAGGCGCGAGAAGTTCCGGT
ACTTGGTCATGTGATGAGCTATGACTTTTGGTCGTGTAAAAAGGGTTTTG
TCGATCTGTCAAGCAGCAAACCCGAACAATGTTAAAAGTCCATTGAGAAA
TTCGATTCACCTGGCGAGCAAGCGTGGGTGGGATTGGATGAGTTGTAGGC
GTGATGGAAAGGAGTAAGCACTTGTTCATGTTCTCCAAGCTCTCACGATG
GGGGTAGCTGGTCCCCAGGCTATAGCTAGCACTCCGTAGTCTGAGTACAA
TTTGCTTATGGTGAGATGTGCATTGAACTCATGTTGTTACTCTCTTTTCG
ATGTCCAATAGTCGTGTTCCTCTGCTGCAGAACTGGGTCCGTAAAGACAT
ATTTTCGGGTGTACCTGATGGTGACGAATGTTTACGAACCGTATAATGAG
TAGTATTCGATATGTGAGGTCGACCTTGGACGTATAGCATGCTCCCCCAG
ATTAAATGCGAGTGTGAGTGAGGGTATTGATGTACGTTGTCCACGTAACA
TATGCCCCCCTTCCCCGCCAATATTGGAGCAACTATCAAAAGTATTCTTT
GTAGTGATTTTTACTGCTGATACGGAAAGCATTTGCGGCTTTTGTTCAGC
AAGTGCTGATTGTATTTGATGCAAAACGATGGCAAGAAAAACAAGAAATG
CTTGCCTCGGGGAATGGGTTTTAATCTAGTTGTCGTGTACATGGTATCTC
GAACCCCTAGCTTGCCTATCACCTGAAACGCCTTCACCGAAACTTGTTGT
GTTGGCGCTTTGCTGCTTGGCCCGTTTGACATGAATCGCCATGGCTGCGT
GTGTGCGGGAACGTGATGCCGATGGCGTGAATAACCGTCTCGACCTGTGT
GGGATAATGCGCTATTCTGTGGGTGTGCTTACCGCATGGTTACTTCGGTT
TGCATCAGCCGTGGGGTCCGGCCAGCCTTATGCTCTCTGTGAGTGTTGAT
CCGAAACGATTTTGTTTTTGCCGCCTTTTTTTTTTTTTTTCTTTATAACT
GTTCATCTGTATGTATAGATACATATTTGAATTATGTTAAATTAAGAATG
AAAATGATACACCGAAATCAGCTAGCTTTTGCAGTACTGTACTAAAGACT
CAAACGTGATTTATTTATTTTTGTGAATGTTACGTAAGTGTTAATTGAAT
TTTTCGAGTCTTGCAGAAAAAAAAGGTTTTTGATTTGTTACGAAAATAGG
CGAACTTCAATGCTCACGCGCACTGACCGCCTCTGTTTTTTTGTTTTTTT
TGGCATTGTGTTTATTTTGTGAAACGCAGAAATGATTAGGCCCCGAGTAG
TGTTGTATTTTCTTCTTGGAGAAGCTTGCAGCGTTCCTTTGGTTTTGGAG
GTTTTACGTGTACCCATCAAACACCGAGCGTACGGAAAAGCGTCGCGAAG
ATTTTCAATTATTGAACTGTGGTCTAATAGCTACTTGCCCCACCTATATC
TTAGTATGTGTGTCTTGTGCATATGTGTGTCTTGTGCATATGTGTGTCCC
GCCGCCGCCGCCGCCGCCGCTGCTTGTTTGCTTCGTCAGCTGCGGCTCGT
GCACTGATGGGAATTGAGGACTTGAGTGCGGAAGAGGTGGCTCGCAGATC
GATGGAGGTGATGATCAAGAGGAACCTTTTTTTTCCTGTTGCCCGAGGTT
TGCAACTAACTCGTTCGGTGTGCAAGGGATTTATGCGTATTTGTTTGTGT
GTCGCTCTTTCCGTTTGCAATTGCTATTTGATTGGTTCTTAACGATTTGT
TGGGCTTCTACAATAGTAATTGTAGAATGTGTTTTTGTTGGAAGTAGGTA
ATTCTCCAAAACCACAAGTTTTCTTGCGCTCTACCCTTTTTTACCTACTA
TGAGTATATTAACAAATTCTTGTTTGGTTCGTAAAGCTCGTGAAGGTATT
TTAGAATTTATTTTATTGAAGCACCCTTTAGATTGTCCTGTATGTGATCA
AGGTGGAGAATGTGATTTACAAGAGCAAATTTTTCATTTTGGTTCCGATA
GAGGAAGGTTAAAAAAAAAAAAAAAAATCTATGGGTCATACGTTTCGGGG
TCTATTAATTAAAAACAATAATGCGACGCTGTATTCTTTGTACTCGTTGT
GTTCAATACATCGTAGAAGGGACACAATTGTCGGTTTTTCATTTGCGAGC
AAATCGGGCTTGCTGCCAAAGGGTGTTTTAAAAAAAATTCGTCTCCGGGG
CATGCTCAGAGCAGTCTTGGGAACATTCCTAGTGTACCGCTTGAGAGGAT
TCCGGGGTCATCGTTGTCCATGGTTGAATTTTTTCATGCTTGCTTAGTAT
AGGGTGTCACCCGCTGTCATGATCCCAAATGATGCGAGTGGCGCGCTATT
TAGCTAGCAAGAGGTTTGGAGCTCTATACTCTCACGTTCATTTTTTTTTG
TTTTATTGTCAGACAGTGTGACATCCTCGTTCTAAGATATATGGGGGGTC
GAAAAAGCTGGCCGCCCAAGTACATTAGGCGGGCGAGAAAGTGCTCGGGT
ACGGATAGAGGTATCTTCACAGAGTTGATGTGAATAGGTCATTTATGGCA
TTTTGATGGCGCACTTTTGTAATAAATTTGAAAAAAAAAAAAAGCTTCGT
ATCTATTTTTTTTCTTTGGTCAAGTGGTGTGCATTCCTTCTGCACATGAA
GGAGAGCTAGAGAACGAGTTTTTCGCAGATTTTTACACTGCCCGGCCTGC
ACAACCAGTCACCAGCAAAATTTCCACCGCAACAACCAGCTACCGCGGTG
TCTGCTGACTTGACCTGTCCACGGCCAACCGACAACAACCGGCCGGTTGG
TCATGGTCAAGTGTGCCGAACAGATTCAATTACCTGACGAGTGTATAACC
CCGGCTTTTAGTCATCCAAGTTCCTCAGTCAAGCTGACACACCACGTAAA
AATACTTGAAATCCGGAGTCTGTTTTTCGATACTCGGAGAGGTTCGACTG
TTGGTTTCTTTCCCCCCCGCCGCCTCCCGGTCTGTGTAACAACGTAGTGA
TGGATGAGAACTAGTAGCTATGCAGTATCGCCCTTATGAAATGCAGCCTG
GCAGGCGAAAAACACGGCATGCTCCGATGATCCGTCCCGGCAATTGACGG
GATGCTGGGTCAAATGGTTGAGAGAGACTACAGCATACGTTTTTTGTTAG
TAAACCTCCCACCCTCCGCCCCCCGTCCCGTGTCGCCTTTCGTCGTTCTG
TTTGTCCTCTCGAGCAGATCGCTGCGGACCTGTGCGTGTACACGAATAGC
AATTTTACCACCCACGTCCTGGACACTGCAGAAGAGGAGAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig4792:3082..13223- >mRNA_H-paniculata_contig4792.11866.1 ID=mRNA_H-paniculata_contig4792.11866.1|Name=mRNA_H-paniculata_contig4792.11866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig4792:3082..13223- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACGGAACCACCATCTTGTGTGTGCGCAAGAATGGGAAAGTGATGCA
CGGAACCACCATCTTGTGTGTGCGCAAGAATGGGAAAGTGGTGATGATCG
GGGACGGGCAGGTTAGCCAGGGCTCCATGGTGGTGAAGCCAAACGCTACG
AAAGTGCGGAAGCTGGGGTCAGGTCAGGTTCTTGCGGGGTTTGCCGGCTC
TACCGCCGACGCCTTGACTCTGGTGGAACGCCTGGAATCCAAGCTTGAAG
AGCACGACGGTGATGATCGGGGACGGGCAGGTTAGCCAGGGCTCCATGGT
GGTGAAGCCAAACGCTACGAAAGTGCGGAAGCTGGGGTCAGGTCAGGTTC
TTGCGGGGTTTGCCGGCTCTACCGCCGACGCCTTGACTCTGGTGGAACGC
CTGGAATCCAAGCTTGAAGAGCACGACGGTCAACTACAGAACGCGTGTGT
GTCCCTTGCTAAGGAATGGAGGACGGACAAGTACCTGCGTCGACTTGAGG
TCAACTACAGAACGCGTGTGTGTCCCTTGCTAAGGAATGGAGGACGGACA
AGTACCTGCGTCGACTTGAGGCTGTTGTGTTAGTAGCCGATGGCAAGACG
TCGCTGACTGTGTCGGGACTAGGCGACGTCCTCGCACCGCATGGAGGCGT
TATCGGCTGTTGTGTTAGTAGCCGATGGCAAGACGTCGCTGACTGTGTCG
GGACTAGGCGACGTCCTCGCACCGCATGGAGGCGTTATCGCCGTGGGGTC
CGGCCAGCCTTATGCTCTCTCCGTGGGGTCCGGCCAGCCTTATGCTCTCT
CTGCGGCTCGTGCACTGATGGGAATTGAGGACTTGAGTGCGGAAGAGGTG
GCTCGCAGATCGATGGAGCTGCGGCTCGTGCACTGATGGGAATTGAGGAC
TTGAGTGCGGAAGAGGTGGCTCGCAGATCGATGGAGATCGCTGCGGACCT
GTGCGTGTACACGAATAGCAATTTTACCACCCACGTCCTGGACACTGCAG
AAGAGGAGAACATCGCTGCGGACCTGTGCGTGTACACGAATAGCAATTTT
ACCACCCACGTCCTGGACACTGCAGAAGAGGAGAAC back to top
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