prot_H-paniculata_contig479.11861.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig479.11861.1
Unique Nameprot_H-paniculata_contig479.11861.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length148
Homology
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 4.660e-89
Identity = 137/153 (89.54%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHS-AAGAPGG-----KKPSVQY 147
            MFLQLFVVNKSGGLIYNQNLS+AAPRL SNDWLRLGSTFHSLHAIA+QVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLG VLQEIYELYTDYVLKNPFYELEMPIRCELFT YLEELIERHS A GAP       KKP+ QY
Sbjct:    1 MFLQLFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGAPXXXXXXXKKPAGQY 153          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A835ZDL6_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL6_9STRA)

HSP 1 Score: 210 bits (535), Expect = 8.410e-68
Identity = 103/135 (76.30%), Postives = 121/135 (89.63%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAA 135
            MFLQLF++NKSG LI++Q+LS AAPRL+SND LRLGSTFHSLHAIA+QVAP+ SSGIEKLET T++L+  QTLTG KFVITA+  TP+L  VLQ IYELYTDYVLKNPFYELEMPIRCELFT +LE+L+ER++AA
Sbjct:    1 MFLQLFIINKSGSLIFHQDLSPAAPRLSSNDSLRLGSTFHSLHAIAAQVAPIASSGIEKLETATYRLRCLQTLTGAKFVITAQPNTPELEVVLQGIYELYTDYVLKNPFYELEMPIRCELFTQHLEKLVERYNAA 135          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.480e-65
Identity = 98/147 (66.67%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGAPGGKKPSVQY 147
            MFL LF++++SGGLI+NQ+LS  APRL +NDWLRLGSTFH  HAIASQ+APV SSGIEKLETD+F L+ FQ  TG+KFVITAEAGT DL  VLQ +Y+ YTDYVLKNPFYELEMPIRCELFT  +  +I+ H +    G    + QY
Sbjct:    1 MFLHLFIISRSGGLIFNQDLSELAPRLNANDWLRLGSTFHGFHAIASQIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLKNPFYELEMPIRCELFTEAIARVIQSHGSQTGKGSSSRAHQY 147          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC)

HSP 1 Score: 196 bits (497), Expect = 6.910e-62
Identity = 95/133 (71.43%), Postives = 113/133 (84.96%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHS 133
            MFL LFV+++SGGLIYN++LS++APRLT N+WL LGSTFH LH+IA+QVAP+ SSGIEKLE D  KLQ FQ+ TGVKFV+TAE GTPDL  VL  IYELY DYVLKNPFYE++MPIRC+LF   +E LIER+S
Sbjct:    4 MFLHLFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNS 136          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD)

HSP 1 Score: 186 bits (471), Expect = 6.470e-58
Identity = 89/134 (66.42%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSA 134
            M   L+++NKSGGL+Y Q+LS+AAP+L+SND LRLGSTFHS+HAIA   +PV S GIE LETDTF+LQ FQT TG+KF +TA  GTPDL AVL+ +YELY DYVLKNPFYELEMPIRC LF S L+  +++ +A
Sbjct:    1 MLHSLYIINKSGGLVYQQDLSSAAPKLSSNDHLRLGSTFHSMHAIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLKNPFYELEMPIRCSLFNSGLKTFVDKFNA 134          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN)

HSP 1 Score: 185 bits (469), Expect = 1.300e-57
Identity = 93/147 (63.27%), Postives = 110/147 (74.83%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGAPGGKKPSVQY 147
            M   L+++NKSGGLIY  +LS+AAPRL+SND LRLGSTFHS+HAIA   APV S GIE LETDTF+LQ FQT TG+KF ITA  GTPDL   L+ IYELY DYVLKNPFYELEMPIRC LF + L+  +++ +A  A    + S  Y
Sbjct:    1 MLHSLYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGLKSFVDKFNADSARRRPQGSDSY 147          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.340e-55
Identity = 87/131 (66.41%), Postives = 105/131 (80.15%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIER 131
            M   L+++NKSGGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIA+  APV S GI  LETDTF+LQ FQTLTG+KF ITA+ GT D+   L+ IYELY DYVLKNPFYELEMPIRC LF + L+  +++
Sbjct:    1 MLHALYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGLKLFVDK 131          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A7S4A735_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A735_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.610e-53
Identity = 83/136 (61.03%), Postives = 104/136 (76.47%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAG 136
            M+LQL ++NKSGGL+YNQ+LS  A +L SNDWLR+GSTFHSLH IA  + P  SSGI  LET +F L+  +T+TG+KFV+TAE GT  L  VL+ +YELY+DYVLKNPF++LEMPIRC LFT ++ EL E     G
Sbjct:    1 MYLQLMIINKSGGLVYNQDLSPQAAQLDSNDWLRIGSTFHSLHEIARSIPPGRSSGIVALETSSFALRCLETITGIKFVLTAERGTQVLEPVLRMVYELYSDYVLKNPFHDLEMPIRCRLFTEHVTELFESFHTTG 136          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: M4BAF1_HYAAE (Trafficking protein particle complex subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAF1_HYAAE)

HSP 1 Score: 173 bits (439), Expect = 5.770e-53
Identity = 83/137 (60.58%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGA 137
            M   L+++NK+GGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIA+  AP  S GI+ LET TF+LQ  QT TG KF +TA  GTP +   LQ +YELY DYVLKNPFYELEMPIRC LF + L+  ++R +   A
Sbjct:    1 MLHSLYIINKAGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPTNSGGIDSLETGTFRLQCLQTPTGTKFFLTAALGTPSVDVTLQTVYELYVDYVLKNPFYELEMPIRCSLFNTRLKNFVDRFNLESA 137          
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Match: A0A6G0XR37_9STRA (Trafficking protein particle complex subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR37_9STRA)

HSP 1 Score: 172 bits (437), Expect = 7.940e-53
Identity = 87/133 (65.41%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    1 MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLQEIYELYTDYVLKNPFYELEMPIRCELFTSYLEELIER 131
            M L L+V+NK+GGLIY Q+LS+ AP+L+SND+LRLGSTFHS+HAIA+  APV S GI  +ETD+F+LQ FQ +TG KF ITA     + +L AVL +IYELY DYVLKNPFYELEMPIRC LF S L+ L+ER
Sbjct:    1 MLLSLYVINKAGGLIYQQDLSSEAPKLSSNDYLRLGSTFHSMHAIAALAAPVLSKGILSMETDSFRLQCFQAMTGTKFFITALPVLSSAELDAVLLQIYELYADYVLKNPFYELEMPIRCHLFHSNLQLLVER 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig479.11861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ99_ECTSI4.660e-8989.54Trafficking protein particle complex subunit n=2 T... [more]
A0A835ZDL6_9STRA8.410e-6876.30Trafficking protein particle complex subunit n=1 T... [more]
A0A7S2RJT7_9STRA2.480e-6566.67Trafficking protein particle complex subunit n=1 T... [more]
K8Z5G7_NANGC6.910e-6271.43Trafficking protein particle complex subunit (Frag... [more]
K3WRL1_GLOUD6.470e-5866.42Trafficking protein particle complex subunit n=1 T... [more]
A0A2D4CAE8_PYTIN1.300e-5763.27Trafficking protein particle complex subunit n=2 T... [more]
F0WDB3_9STRA2.340e-5566.41Trafficking protein particle complex subunit n=3 T... [more]
A0A7S4A735_9STRA2.610e-5361.03Trafficking protein particle complex subunit n=1 T... [more]
M4BAF1_HYAAE5.770e-5360.58Trafficking protein particle complex subunit n=1 T... [more]
A0A6G0XR37_9STRA7.940e-5365.41Trafficking protein particle complex subunit n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 2..132
e-value: 1.3E-63
score: 227.3
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 4..131
e-value: 8.6E-46
score: 155.4
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249SYNBINDINcoord: 3..133
NoneNo IPR availableGENE3D3.30.450.70coord: 1..133
e-value: 4.9E-51
score: 174.8
NoneNo IPR availablePANTHERPTHR23249:SF15TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4coord: 3..133
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 4..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig479contigH-paniculata_contig479:24453..27477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig479.11861.1mRNA_H-paniculata_contig479.11861.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig479 23854..27542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig479.11861.1 ID=prot_H-paniculata_contig479.11861.1|Name=mRNA_H-paniculata_contig479.11861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MFLQLFVVNKSGGLIYNQNLSAAAPRLTSNDWLRLGSTFHSLHAIASQVA
PVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLQEIYELY
TDYVLKNPFYELEMPIRCELFTSYLEELIERHSAAGAPGGKKPSVQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007233TRAPPC
IPR011012Longin-like_dom_sf