prot_H-paniculata_contig11848.1185.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11848.1185.1
Unique Nameprot_H-paniculata_contig11848.1185.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length234
Homology
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A0J7NAF3_LASNI (Retrovirus-related gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NAF3_LASNI)

HSP 1 Score: 79.7 bits (195), Expect = 1.840e-13
Identity = 65/222 (29.28%), Postives = 103/222 (46.40%), Query Frame = 0
Query:    3 YMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRD------MKGPFSALSVTPAVTRSHARGERGD----LSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEE---------EPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            Y+ +  ++R+KL   +   +F+ YDE+S +YR Y+P N+ + +SRNVRF        H G++E D +R+      +K        T    R+  + E  D        E  TS + ++E D+       + Q      G              EPKS +EAL     ++W   M++E   L +N+TWE  +   L  GR+ I  KWI+K K  E G++ R K
Sbjct:  537 YVHVPQEKRHKLQNTSIQMIFVGYDENSKAYRCYDPVNRKLVISRNVRFV---MKKVHSGEIELDHSRENSEGQILKEKNKEALDTNTWDRNEDQSEHEDSMLNYETAESDTSLNSSQENDTTVIQNTTERQSQRTNKGVPPNHFGEWVNVITEPKSLSEALADKNKEEWINVMKDEMASLKRNQTWELCE---LPKGREAISCKWIYKLKTDEKGNITRYK 752          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A6S7GU92_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GU92_PARCT)

HSP 1 Score: 79.3 bits (194), Expect = 2.060e-13
Identity = 71/251 (28.29%), Postives = 109/251 (43.43%), Query Frame = 0
Query:    3 YMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHR--------GQLEHDETRDMKGPFSALSVTPAV--TRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAV-----------------SEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDKEAVGEVAVQLTTESSLMYAST 226
            YM +  + R K D K    +F+ Y   S  YR+Y+P+ + + +SR+V FDE++F+   +          L  D+    +   S+  V P    T  H  G       TE+P+ + E   E         ++++  +  G V                 S EEP +  EAL   + ++W  A++ E+   +KN TW     G L  GRK I  +W+FK K   DGSV R K  +  VA   + E  L Y  T
Sbjct:  165 YMHVPKETRKKWDSKTKKCIFVGYSISSKGYRLYDPKTRKLHISRDVLFDEDEFIQQKKFMQIVNLNDSLPEDQEEPQENKPSSEHVIPGDQDTVDHDEG-------TEEPSISRETEVEQQPRRS--TRIREPPDRHGVVITGNWWQNNVACINSEFSPEEPTTIREALNCSDKEQWKQALDNEYSAHIKNNTWTL---GNLPEGRKAIDCRWVFKVKYNADGSVERHKARL--VAKGYSQEPGLDYDET 401          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A3S3PPW2_9ACAR (Gag-pol polyprotein-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3PPW2_9ACAR)

HSP 1 Score: 78.2 bits (191), Expect = 5.820e-13
Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 0
Query:   11 RYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            R KLD K+   +F+ YDE   + R+Y+ +  SV + R+V F +   +  +   LE D            SV  A T+         L++ EKP    E +E +        + +        ++++EP +  EAL SPEA+KW  A+EEE + L  N TW    R +    RK I  KW+FKRK+K DGS+ R K
Sbjct:  239 RSKLDSKSEKQLFVGYDEKKKAIRVYDSKRNSVSVVRDVIFPK---MHPYNETLEADRN----------SVDQATTKISTIV----LNDEEKPEENIETKETEVTQNRYNLRPRKDKQHYACIADDEPSTFKEALLSPEANKWKEAIEEELKSLKANNTWIDVTRPK---DRKVISNKWVFKRKIKPDGSIERYK 413          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A1W7R6D9_AEDAL (Putative polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D9_AEDAL)

HSP 1 Score: 72.4 bits (176), Expect = 5.310e-11
Identity = 68/234 (29.06%), Postives = 106/234 (45.30%), Query Frame = 0
Query:    3 YMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRG------QLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAAVGVAK--VQDTSNPTG-----------------------AVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            Y  +  Q+R K + KA    F+ Y  ++ +YR+ +     + +SR+VRF E D VT          +++ D   +M   F  L  T  V  +    +   + + E+      + ++  G  +G+    VQ+  +P G                       A    EPKS AEAL SPE+DKW AAM EE   L++ +TW   D  +L   RK I ++W++KRK   +G V R K
Sbjct:  481 YAWIPPQKRKKFEVKAEKLTFVGYSSENKAYRLLDARTGRIVVSRDVRFVEFDGVTPTEAISTDPEEVKRDADAEM---FVRLENTVPVDLAADNTKNRSIDSEEEFFGCDSSSDDGEGRLLGLENEPVQEELDPVGLRRSARSNIGQPPERYRETIGLAAAVACEPKSYAEALASPESDKWKAAMAEEMASLMEKDTW---DVVQLPADRKAIGSRWVYKRKESANGDVVRFK 708          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A151TIH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TIH6_CAJCA)

HSP 1 Score: 71.2 bits (173), Expect = 1.440e-10
Identity = 69/209 (33.01%), Postives = 103/209 (49.28%), Query Frame = 0
Query:    1 MTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETR--DMKGPFSALSVTPAVTRSHARG-ERGDLSNTEKPTSASENRE-EDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            + Y  +  Q+R KLD K+   +F+ Y+  + SY++YNP+ K V  SR+V FDE +  +  + ++E       D +   S    T        R  E     N   P+  S+ +   D+  +V    VQ  +     +++ EP S  EA+ S E   W +AMEEE R + KN TWE  +   L   +  I  KW+FK KLK DGSVA+ K
Sbjct:  670 LCYRHVPDQRRKKLDDKSEPMIFVGYNS-TGSYKLYNPKTKQVLFSRDVYFDESNSWSESQSKIETVSKLQFDWEENNSIGETTQETMNDVCRTVENRPTRNKNFPSRLSDYQVYPDNAISVDGDLVQHLA----LMADVEPISLDEAITSKE---WRSAMEEELRSIEKNHTWEMVE---LPQNKTPIDVKWVFKIKLKPDGSVAKHK 867          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A540MM95_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MM95_MALBA)

HSP 1 Score: 70.5 bits (171), Expect = 2.040e-10
Identity = 69/225 (30.67%), Postives = 103/225 (45.78%), Query Frame = 0
Query:    1 MTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEE---DFVTGHRGQL-------EHDE--TRDMKGPFSALSVTPA---VTRSHARG-----ERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            + ++ +  ++R KLD K+   +F+ YD +S  Y++YNP N+ + +SR+V FDEE   DF   H G L       E +E  T +        S TP    ++ +H          G L+  E P + S            VA+  D        ++ EP    EA++     KW  AM+EE   + KNETWE      L  G+K I  KW++K K   +G V R K
Sbjct:  108 IAHVHVPDERRAKLDDKSEKFIFIGYDSNSKGYKLYNPNNRKMVISRDVTFDEEEEWDFGP-HAGDLHFFPQFEEENEQGTMEQAREVQQESTTPPASPISTNHGNSPASTSSSGSLNEREVPRTRSIRD------LYEVAERLDNPTLFCLFADCEPVDFQEAVQD---TKWKKAMDEEIEAIEKNETWELTV---LPKGQKAIGVKWVYKTKKNANGEVERYK 319          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A6G0WH06_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WH06_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.370e-10
Identity = 62/213 (29.11%), Postives = 98/213 (46.01%), Query Frame = 0
Query:    7 QSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGH--------RGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREEDSGAA------VGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            +SQ+  KL   A   VFL Y  +   Y+++NP++++V +SR+V FDE      +         G+L     + ++G  S   +T    R+    E+     T KP   ++ R  D  A       V   + Q   +P        P + AE   SPE ++W  AM++E+  L +N  WE  +   L  GRK +  KWI+K K   +G+V R K
Sbjct:  442 KSQRDGKLTNPATPCVFLGYATEQLGYKLWNPKDQTVTVSRSVTFDESKIRNANMFANSKFNHGRLSIPNYKLIEGVTSLEDLTTERFRTETTAEQTGNQAT-KPHHEAQTRRSDRKAKRPRRFEVNQVEFQAPQSPLAPKRINAPTTMAEFRSSPEREQWQQAMDDEYNSLTQNRVWELTE---LPKGRKALKCKWIWKVKYLANGAVERFK 650          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 68.9 bits (167), Expect = 4.910e-10
Identity = 63/214 (29.44%), Postives = 91/214 (42.52%), Query Frame = 0
Query:   10 QRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEED----------------FVTGHRGQL-EHDETRDMKGPFSALSVTPAVT-RSHARGERGDLSNTEKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            QR K   K+   + + YDE+  +YR+ +P+ K V +S NV F E+                   T +  Q  E DE +  +     LS +   T R + + +  D +  + P     N                       V + EP S  EA+K PE +KW  A+ EE   + KN TW       L  GR+ I  KWIFK+KL E+G+V R K
Sbjct:   50 QRTKWQPKSKKMILVGYDEEIDNYRLMDPKTKKVVISTNVMFHEKSNCELEESSDENTTAPIIETENDQQASEDDEDQQYESKSDVLSESKVKTPRENIQRQLRDRNKLKAPKRLEMNL----------------------VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN--LPKGRRPISAKWIFKKKLDEEGNVVRYK 239          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A392M150_9FABA (Gag-pol polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M150_9FABA)

HSP 1 Score: 68.2 bits (165), Expect = 1.380e-9
Identity = 64/211 (30.33%), Postives = 95/211 (45.02%), Query Frame = 0
Query:    3 YMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSALSVTP--AVTRSHARGERGDLSNTEKPTSASENREEDSGAAVG------VAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            Y++L   QR K+D K+  G+FL Y  +S +YR+YN   K +  S N+  D  D  T     + H E    +  F      P    T       R   +N    T   +N   D  A +G        + ++  + +  VS+ EPK+  EAL+    + W  AM+EE     +NE W+   R   +     I TKWIFK K  E+G+V R+K
Sbjct:  329 YILLDRDQRRKMDPKSEEGIFLGYSTNSRAYRVYNNRTKVIMESINIVVD--DAPTVRTDDVTHAEPSMPQATFELEEEEPQDGNTNDEVVEIRQPTTNKGPSTRIQKNHPPD--AIIGQLDRGVTTRSREVVSNSCFVSKIEPKNVKEALQD---EFWINAMQEELTQFERNEVWDLVPRPNDV---NVIGTKWIFKNKSDENGTVTRNK 529          
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 67.8 bits (164), Expect = 1.920e-9
Identity = 58/199 (29.15%), Postives = 91/199 (45.73%), Query Frame = 0
Query:   10 QRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVRFDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNTEKPTSASENREE---DSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEADKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGSVARDK 205
            QR K   K+   + + YDE++ +YR+ +P+ K V +S NV F E+          E+  T  ++      +      + +      D+ +  K  +  EN +    D        +++        V + EP S  EA+K PE +KW  A+ EE   + KN TW       L  GR+ I  KWIFK+KL E+G+V R K
Sbjct:  425 QRTKWQPKSKKMILVGYDEETDNYRLMDPKTKKVVISINVTFHEKSNCELEESSDENTTTPIIETENDQQAXXXXXXQQYES--ESDVLSESKVKTPRENIQRQLRDRNKLKAPKRLE-----MNLVEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN--LPKGRRPISAKWIFKKKLDEEGNVVRYK 614          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11848.1185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7NAF3_LASNI1.840e-1329.28Retrovirus-related gag-pol polyprotein n=1 Tax=Las... [more]
A0A6S7GU92_PARCT2.060e-1328.29Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A3S3PPW2_9ACAR5.820e-1332.82Gag-pol polyprotein-like protein (Fragment) n=1 Ta... [more]
A0A1W7R6D9_AEDAL5.310e-1129.06Putative polyprotein (Fragment) n=1 Tax=Aedes albo... [more]
A0A151TIH6_CAJCA1.440e-1033.01Retrovirus-related Pol polyprotein from transposon... [more]
A0A540MM95_MALBA2.040e-1030.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WH06_9STRA4.370e-1029.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A0J7K416_LASNI4.910e-1029.44Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A392M150_9FABA1.380e-930.33Gag-pol polyprotein n=1 Tax=Trifolium medium TaxID... [more]
A0A0J7KM48_LASNI1.920e-929.15Integrase catalytic domain-containing protein n=2 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..203
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 3..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11848contigH-paniculata_contig11848:1849..2769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11848.1185.1mRNA_H-paniculata_contig11848.1185.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11848 758..3099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11848.1185.1 ID=prot_H-paniculata_contig11848.1185.1|Name=mRNA_H-paniculata_contig11848.1185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
MTYMILQSQQRYKLDGKAWVGVFLRYDEDSSSYRIYNPENKSVQLSRNVR
FDEEDFVTGHRGQLEHDETRDMKGPFSALSVTPAVTRSHARGERGDLSNT
EKPTSASENREEDSGAAVGVAKVQDTSNPTGAVSEEEPKSAAEALKSPEA
DKWSAAMEEEWRVLVKNETWESEDRGRLLVGRKTICTKWIFKRKLKEDGS
VARDKEAVGEVAVQLTTESSLMYASTGTRLDIA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like