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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-28_002040.1 |
| Exons | 4 |
| Model size | 936 |
| Cds size | 621 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4786.11852.1 >prot_H-paniculata_contig4786.11852.1 ID=prot_H-paniculata_contig4786.11852.1|Name=mRNA_H-paniculata_contig4786.11852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MSGFDKCCCKGHWEVFRLLSNAEANLYGRNNQGGTALLWLLERGACRMCG
SCAIGALTIGYNVQSTCESMYLYHTLGDIGDESLMGAYVEDGALTVNGKP
VFYANNSRGIIYWTNITSARRWLREDDKQQENATFKTVKRSGGNFTLESD
ETPRVITPLTFKAKETGVEPAYDCLSGAWVVAPANGSFPAYAVDSVTVRV
AFNKHT* back to topmRNA from alignment at H-paniculata_contig4786:11263..13820+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4786.11852.1 ID=mRNA_H-paniculata_contig4786.11852.1|Name=mRNA_H-paniculata_contig4786.11852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2558bp|location=Sequence derived from alignment at H-paniculata_contig4786:11263..13820+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACGTTGGAAGAGGGTGGGAAGAGGCCGGCAGACCAGCCGATCGCCTCC
CTAGACCGTACAGTACTCAGGGCCTGAAGAGCCCTGACCTGGGTCAATCG
CGCCCAGTCAACTCCTTCACTGTTTTCACAGAACTGGAGTGCTTGGTCGA
CGGTGCTATCGGGGTCGGCCAGATTCAGGTTGAACGGGTCCTTCTGCCTT
GGGGGGCAGCTAGGCCATGTCGGGCTTCGATAAATGCTGCTGCAAGGGAC
ACTGGGAGGTTTTCCGGCTCTTGAGCAATGCTGAGGCGAATTTATATGGC
CGCAATAATCAAGGTGGCACTGCCTTATTATGGCTGCTGGAACGAGGCGC
TTGTAGGATGTGCGGCTCGTGCGCCATAGGGGCATTGACTATTGGCTACA
ATGGTGAGCAGGCGACCCAGCCCAGCTCGGGGGCGCGACCCAGTACGTTC
TGGACGCCGCTAGTGACGTAGTCGACCAGTGCGATTTCGTGACCGGCCGA
GGCAGTGCAGGAAAGGACTGGAGGGATATACACCCACCTCAACAGCGCAT
CGCCGTCTTACTGAGTGCCAGCATATGACATACTACTTGGTCGCAGTAGG
AAGAAGGTTTTGGCTGTCATCGTTCGGAGGTTGCTGTTATAGAAGTAGAA
GTTCTGCCTTCGCGAGGATATCTAACAGCTAAGTTTGGCAAACACGAAAA
CGCCCGGCCCCCTACCCTCCCTCTATATGGAACAAAACACTCTCTCTCGA
GTATACGTGGTCAATGGTCTTGAATTTTAAGGCATATATATGAGTGCACC
CCCCCCCCCACCGTGCCCAATACCCTCTCTTCCTGCCTTTGTCGCAGTGC
AATCCACCTGTGAATCCATGTACCTCTACCACACCCTCGGCGACATTGGC
GATGAGAGTCTAATGGGGGCATACGTGGAAGACGGAGCGCTGACCGTAAA
CGGCAAGCCTGTGTTCTACGCGAACAACTCGAGGGGAATCATTTACTGGA
CAAATATCACTTCTGCACGTCGCTGGCTCCGCGAAGGTACAGTCAGTACG
AGGTCGTGTATATCAGGTACGCGAAAAACCGAGGTAGTCGTAACATTTTA
TGGAGGGAAAGAGCTTGATTGCTTTTTTGTCGGAAAAGTTTTGAAACAGT
GGAGTGGCGAAAGCTTCAAGAATCATAATGTCTTTCTGCTGCTGCTGCTG
CTGTTGCTGCTGCTGCCTTTTTTGGTATTTTTGCTTCTAACCATGTCTGC
TATCAAAGATGATAAGCAGCAAGAAAACGCCACGTTCAAGACCGTCAAGA
GGTCGGGGGGCAACTTTACCTTGGAATCCGACGAGACCCCCCGGGTTATC
ACTCCACTCACTTTTAAGGCTAAAGAGACGGGGGTCGAGCCAGCGTACGA
CTGCCTGTCGGGTGCGTGGGTGGTCGCGCCGGCCAATGGGTCATTCCCTG
CATATGCGGTGAGAGCGTGACAGACAAGAAAGACAGACATGGGTACCGCC
GCGAATCCTCGAGTCATGCCATCTGAAATCAAATCGTCTTCAAGAGCGAC
AAACTGTTCACCCCCCGGACAAATATGAATGGTGCATTTATAACGATTTG
AGTGCTGTAATCATCCGTATTTGGTGAATACGGATGCGTTGCAGATACAG
TCTGCAGTCGAACGTTAGACTAGCGAATGTGCGTCGGACGATTGTTGGAC
AAGATGATGTATCATGTGTATTCATCTACACGAATGCTCCATGAAGGACC
CATCTACAATCGTATTCATCTACACGAGTGCTCTATCAGGTCCCTGTGTG
CATTCGTATTCATCCACACGAATTATCCATCTGAGGCACATATCCAGTTG
GATTCATCCATAAGAATGCTCCACTCTGGACCTGTTTGCAGTTGCTCATT
CACCCACGAGTGCTCCACTAGAAGTGCTATTGCAGAGGTTCATCCATATA
CAAAATGCTCTTCTCTGATGTTCTATCAACAGTAAAACAACAAAACATAC
GAACGACATAATTTTGGGGCCGACAGGAGCAAGAAGACTCGTGCCGCAAG
ACTTCAACTCTTACAGTAGATTGATTGCCTGTCCGCTGTGTTCCCTATCC
CTTCTCTCTTGTGGCGCTTGGATGTCTGGTGCTCTTGCTTGCTACGGTTT
TTGCTTGTGCGGTATTTGTCATCGCAACCCAAATACCAGGAATTTCATTA
TCACACCTTGTTACTGTACACGGTAAGGACGATAGAAGCAAGGGCGACAA
GAAAATACCACTGAAATGCAAGAACAAATGAAATACTACGTCTTTCAATG
CCTTAGCTCTGAGATATCTACTGGCTGCACCGCATGTGCCTTCATTTGGT
ATGATGATGACTGAACGCGTGTTGACGGTGAGTTGCTCGCGGATCACTTT
GCAAACTGTGGCAGGTCGACTCCGTGACGGTTCGTGTTGCATTTAACAAA
CACACCTAATCAGCGCAACACCCCCGACCGTCATCCGGGCTTGGATGCTG
AAGCTTTTGTGCCTCTTCCTAAGGTTTTCAAGGGGCTTCGTTACTGAAGT
GCAAAAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4786:11263..13820+ >mRNA_H-paniculata_contig4786.11852.1 ID=mRNA_H-paniculata_contig4786.11852.1|Name=mRNA_H-paniculata_contig4786.11852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig4786:11263..13820+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGGCTTCGATAAATGCTGCTGCAAGGGACACTGGGAGGTTTTCCG
GCTCTTGAGCAATGCTGAGGCGAATTTATATGGCCGCAATAATCAAGGTG
GCACTGCCTTATTATGGCTGCTGGAACGAGGCGCTTGTAGGATGTGCGGC
TCGTGCGCCATAGGGGCATTGACTATTGGCTACAATGATGTCGGGCTTCG
ATAAATGCTGCTGCAAGGGACACTGGGAGGTTTTCCGGCTCTTGAGCAAT
GCTGAGGCGAATTTATATGGCCGCAATAATCAAGGTGGCACTGCCTTATT
ATGGCTGCTGGAACGAGGCGCTTGTAGGATGTGCGGCTCGTGCGCCATAG
GGGCATTGACTATTGGCTACAATGTGCAATCCACCTGTGAATCCATGTAC
CTCTACCACACCCTCGGCGACATTGGCGATGAGAGTCTAATGGGGGCATA
CGTGGAAGACGGAGCGCTGACCGTAAACGGCAAGCCTGTGTTCTACGCGA
ACAACTCGAGGGGAATCATTTACTGGACAAATATCACTTCTGCACGTCGC
TGGCTCCGCGAAGTGCAATCCACCTGTGAATCCATGTACCTCTACCACAC
CCTCGGCGACATTGGCGATGAGAGTCTAATGGGGGCATACGTGGAAGACG
GAGCGCTGACCGTAAACGGCAAGCCTGTGTTCTACGCGAACAACTCGAGG
GGAATCATTTACTGGACAAATATCACTTCTGCACGTCGCTGGCTCCGCGA
AGATGATAAGCAGCAAGAAAACGCCACGTTCAAGACCGTCAAGAGGTCGG
GGGGCAACTTTACCTTGGAATCCGACGAGACCCCCCGGGTTATCACTCCA
CTCACTTTTAAGGCTAAAGAGACGGGGGTCGAGCCAGCGTACGACTGCCT
GTCGGGTGCGTGGGTGGTCGCGCCGGCCAATGGGTCATTCCCTGCATATG
CGATGATAAGCAGCAAGAAAACGCCACGTTCAAGACCGTCAAGAGGTCGG
GGGGCAACTTTACCTTGGAATCCGACGAGACCCCCCGGGTTATCACTCCA
CTCACTTTTAAGGCTAAAGAGACGGGGGTCGAGCCAGCGTACGACTGCCT
GTCGGGTGCGTGGGTGGTCGCGCCGGCCAATGGGTCATTCCCTGCATATG
CGGTCGACTCCGTGACGGTTCGTGTTGCATTTAACAAACACACCTAAGTC
GACTCCGTGACGGTTCGTGTTGCATTTAACAAACACACCTAA back to top
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