prot_H-paniculata_contig47822.11848.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47822.11848.1
Unique Nameprot_H-paniculata_contig47822.11848.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 8.940e-44
Identity = 73/111 (65.77%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENACRILD 111
            PLVYISR+T  NE NWD + LEC ALVWAI+KLRV+LYGI F+AFTDHQPLL++IS+ EKKP+VQRMCD LS + F L Y+ GK NQ+ADALSRLP P T  D + C++++
Sbjct:  402 PLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPTAADFDKCKLIE 512          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 5.710e-43
Identity = 72/111 (64.86%), Postives = 89/111 (80.18%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENACRILD 111
            PLVYISR+T  NE NWD + LEC ALVWAI+KLRV+LYGI F+AFTDHQPLL++IS+ EKKP+VQ MCD L+ + F L Y+ GK NQ+ADALSRLP P T DD + C+ ++
Sbjct:  253 PLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQHMCDFLTAYSFTLSYRKGKDNQVADALSRLPQPPTADDFDKCKSIE 363          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5KPU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPU9_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 3.650e-37
Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATE 101
            PLVY+SR+T  NE NWD TDLE  ALVWA+KKLRV+LYGI F   TDHQPL +Y+SLSEKK +V RMCD LS +QF+LRYK G  NQ AD L RLP  AT+
Sbjct:  109 PLVYVSRSTLPNECNWDTTDLEMGALVWAVKKLRVYLYGIPFVVHTDHQPLTSYLSLSEKKLRVHRMCDFLSSYQFSLRYKKGNDNQAADMLFRLPQSATD 209          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5KKY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY6_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 9.410e-37
Identity = 66/101 (65.35%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATE 101
            PLVY+SR+T  NE+NWD  DL   AL W +KKLRV+ YGI F   TDHQPL  Y+SLSEKKP+V  MCD LS +QF+LRYK G  NQ+AD LSRLP PATE
Sbjct: 1311 PLVYVSRSTLPNERNWDTADLGMGALFWVVKKLRVYSYGIPFVVHTDHQPLTAYLSLSEKKPRVHGMCDFLSSYQFSLRYKKGNDNQVADMLSRLPQPATE 1411          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 5.300e-31
Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDP 112
            PL Y+SR+T  NE+ W AT+LEC A+VWAIKK R   YGI F  ++DHQPL N  SL+EK  +VQR  D LS + + L Y+PGK N  AD +SRLP+P  E+D +   R+ DP
Sbjct:  307 PLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEEDASPEMRLTDP 419          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5JJN6_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN6_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 7.760e-31
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDP 112
            PL ++SR+T  NE  W  T+LE  A+VWAIKK R   YGI F+ ++DHQPL N  SL+EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP
Sbjct:  152 PLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDP 264          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 8.130e-31
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQL 88
            PLVY+SR+T  NE NWD + LEC ALVWAI+KLR  LYGI F+AFTDH+PLL++ S+ EKKP+VQRM D LS + F L Y+ GK N++
Sbjct:  374 PLVYVSRSTLPNEANWDVSSLECGALVWAIRKLRDCLYGIPFEAFTDHKPLLSFFSMGEKKPRVQRMGDFLSAYSFTLSYRKGKDNRM 461          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5K4J2_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J2_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.140e-30
Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDP 112
            PL ++SR+T  NE  W  T+LE  A+VWAIKK R   YGI F+ ++DHQPL N  SL+EK  +VQR  D LS     L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP
Sbjct:   59 PLCFLSRSTVPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDCLSACTNKLKYRPGRDNANADLMSRLPLPATKEDEAPDARLTDP 171          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.280e-30
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDP 112
            PL ++SR+T  NE  W  T+LE  A+VWAIKK R   YGI F+ ++DHQPL N  SL+EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP
Sbjct:  152 PLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDP 264          
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 3.310e-29
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    1 PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPATEDDENA-CRILDP 112
            PL ++SR+T  NE  W  T LE  A+VWAIK+ R   YGI F+ ++DHQPL N  SL+EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+PAT++DE    R+ DP
Sbjct:  152 PLCFLSRSTFPNETRWSPTKLEAGAIVWAIKQNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDP 264          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47822.11848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE8.940e-4465.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE5.710e-4364.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPU9_9PHAE3.650e-3767.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKY6_9PHAE9.410e-3765.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRW3_9PHAE5.300e-3153.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JJN6_9PHAE7.760e-3151.33RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5K8H1_9PHAE8.130e-3162.50RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4J2_9PHAE2.140e-3051.33RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAM4_9PHAE2.280e-3051.33RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JWR4_9PHAE3.310e-2950.44Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 1..74
e-value: 2.0E-17
score: 63.4
NoneNo IPR availableGENE3D3.30.70.270coord: 82..94
e-value: 4.3E-25
score: 90.6
NoneNo IPR availableGENE3D3.10.20.370coord: 4..81
e-value: 4.3E-25
score: 90.6
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 3..104
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 3..104
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47822contigH-paniculata_contig47822:10..351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47822.11848.1mRNA_H-paniculata_contig47822.11848.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47822 10..351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47822.11848.1 ID=prot_H-paniculata_contig47822.11848.1|Name=mRNA_H-paniculata_contig47822.11848.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
PLVYISRTTDNNEKNWDATDLECAALVWAIKKLRVFLYGIKFDAFTDHQP
LLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPAT
EDDENACRILDPHE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH