prot_H-paniculata_contig478.11845.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig478.11845.1
Unique Name	prot_H-paniculata_contig478.11845.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	358

Homology

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 7.050e-115
Identity = 178/208 (85.58%), Postives = 182/208 (87.50%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXGFGGMR------GGAGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVGGGRDSR 202
            MARIYIGNLPMDVTEKD+DDVFYKFGRIVDIDLKTPARPPAFGF+TFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRD  FGMGGGG GG             GG R      GGAG Q TE+RVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDM+YALRKLDGSDFRNPFEKSRISVLPHR VGGGRDSR
Sbjct:    1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDP-FGMGGGGHGGRMGMP-------MGGGRXXXXXXGGAGFQQTEYRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMDYALRKLDGSDFRNPFEKSRISVLPHRGVGGGRDSR 200

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.000e-82
Identity = 138/199 (69.35%), Postives = 154/199 (77.39%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXGFGGMRGGAGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVGGGR 199
            MAR+Y+GNLPM+V EKD++D+FYKFGRI DIDLKTPARPPAF FV F D RDAE+AVRARDGY+MDG RLRVE++RG R                  XXXXXX   G   G G Q TE+RVIVTGLPPSASWQDLKDHMRKAG+  YTDVDH+GGGIVH+ TRDDMEYALRKLD S+FRNPF+ S I VLPHR   GGR
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKFGRIRDIDLKTPARPPAFAFVAFDDVRDAEDAVRARDGYEMDGERLRVELARGARGP---------------PXXXXXXXXXGQPMGGGRQ-TEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDVDHRGGGIVHYNTRDDMEYALRKLDDSEFRNPFDHSFIRVLPHRGASGGR 183

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA)

HSP 1 Score: 262 bits (669), Expect = 6.470e-82
Identity = 134/215 (62.33%), Postives = 157/215 (73.02%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFG---------MGGGGFGGXXXXXXXXXXXGFGGMRGG--------AGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVGGG 198
            MAR+Y+GNLPM+V EKD++D+FYK+GRI DIDLKTPARPP+F FV F+D RDAE+AV  RDGY+MDG RLRVE++RG R++GFG          GGG               GFG  RG          G + TE+RVIVTGLPPSASWQDLKDHMRKAG+  YTDVDH+GGGIVH+ TR DM+YALRKLD S+FRNPF+KS I VLPHRA   G
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKYGRIRDIDLKTPARPPSFAFVAFEDVRDAEDAVSGRDGYEMDGQRLRVELARGARERGFGGXXXXXFDERGGG--------------RGFGAGRGXXXXXGPPMGGGRQTEWRVIVTGLPPSASWQDLKDHMRKAGDVVYTDVDHRGGGIVHYATRSDMDYALRKLDDSEFRNPFDKSYIRVLPHRANARG 201

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 7.630e-73
Identity = 137/230 (59.57%), Postives = 164/230 (71.30%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXG---------------------------FGGMRGG-AGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVGGGRDSR 202
            M+R+YIGNLPMD+ EKD++D+FYK+G+I D+ LK P RPPAFGFVTF+D+RDA+EAVRARDGYD DG RLRVE+SRG+R+ G     GGFG XXXXXXXXXXX                             G  RGG  G + TE+R +VTGLP SASWQDLKDHMRKAG+  Y DVDHKGGG+VHF  ++ M+YALRKLDGS+F N ++ + ISVLPHR     RDSR
Sbjct:   53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFG-----GGFGXXXXXXXXXXXXXXXXXXXXXXXXYGXXXGXXXXXXXXXXMGPPRGGFGGGRQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGGGVVHFNNKEGMDYALRKLDGSEFSNRYDTATISVLPHR--DSVRDSR 275

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A6H5KN34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN34_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 3.060e-66
Identity = 124/221 (56.11%), Postives = 149/221 (67.42%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXGFGGMRGGAG--------------------------------AQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISV 189
            M+R+YIGNLPMD+ EKD++D+FYK+G+I D+ LK P RPPAFGFVTF+D RDA+EAVRARDGYD DG RLRVE+SRG+R+ G     GGFG XXXXXXX          GG G                                 + TE+R +VTGLP SASWQDLKDHMRKAG+  Y DVDHKGGG+VHF  R+ M+YALRKLDGS+F N ++ + ISV
Sbjct:   61 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDPRDADEAVRARDGYDFDGYRLRVEMSRGKREFG-----GGFGXXXXXXXX--------XXGGGGXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXGRQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADVDHKGGGVVHFNNREGMDYALRKLDGSEFSNRYDTAIISV 268

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A7S2B3Q3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3Q3_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.600e-63
Identity = 108/187 (57.75%), Postives = 131/187 (70.05%), Query Frame = 0

Query:    3 RIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXGFGGMRGGAGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISV 189
            RI++GNLPMD+ E+DI+D+FYK+GR+ DI LKTP+RPPAF F+TF D RDA++AVR RDGY + G RLRVEI RGRR    G  G                      GG   + ++FRVIVTGLP SASWQDLKDH R+AG+  YTDVD  GGG+V FRT  DMEYAL +LD S FRNPF++S+I V
Sbjct:    8 RIFVGNLPMDIRERDIEDLFYKYGRMSDIHLKTPSRPPAFAFITFDDRRDADDAVRGRDGYSLGGERLRVEIVRGRRGPSRGPAG--------------------RPGGGAGEHSDFRVIVTGLPHSASWQDLKDHFRQAGDVVYTDVDRIGGGLVEFRTLRDMEYALDRLDYSRFRNPFDESKIRV 174

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A7S0RPW5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RPW5_9CHLO)

HSP 1 Score: 200 bits (509), Expect = 1.460e-59
Identity = 108/198 (54.55%), Postives = 134/198 (67.68%), Query Frame = 0

Query:    2 ARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXGFGGMRGGAGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDV--DHKGG-GIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVG 196
             R+Y+GNLP+DV E++++D+FYK+GRI  IDLKTP+RPPAF F+ F D RDA++AVR RDGYD  GSR+RVE++ G R        G F G            FG  R       T++RVIVTGLP SASWQDLKDHMRKAG+ T+T V  D +G  G+V F + DDM+ ALRKLDGS+FRNPF+K  I V   R  G
Sbjct:    3 TRVYVGNLPIDVREREVEDLFYKYGRIRSIDLKTPSRPPAFAFLEFDDPRDAQDAVRGRDGYDFYGSRIRVELAHGGRGPPGXXXXGSFRGDRPGPSALGPSPFGPSR------RTDYRVIVTGLPLSASWQDLKDHMRKAGDVTFTQVMKDGRGNMGLVDFSSYDDMQNALRKLDGSEFRNPFDKCTIKVREDRQGG 194

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A699ZIZ3_HAELA (Uncharacterized protein (Fragment) n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZIZ3_HAELA)

HSP 1 Score: 200 bits (508), Expect = 2.730e-59
Identity = 121/212 (57.08%), Postives = 150/212 (70.75%), Query Frame = 0

Query:    2 ARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGXXXXXXXXXXXGFGGMRGGAGA-----------QMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDV--DHKGG--GIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVGGG 198
            +R+Y+GNLP+DV E++IDD+FYK+GRI  IDLKTP+RPPAF F+ ++D RDA +AVR RDGYD  GSR+RVE+S G R    G+    +GG  XXXXXXX  G    RGG+ +           + T+FRVIVT LP SASWQDLKDHMRKAG+ T+T V  D +GG  G+V F T DDM+ ALRKLD S+FRNPF+K+ I V   R  GGG
Sbjct:    4 SRVYVGNLPLDVREREIDDLFYKYGRIRGIDLKTPSRPPAFAFIDYEDPRDAADAVRGRDGYDFYGSRIRVELSHGGRG---GLSSDRYGGGDXXXXXXXR-GRDDYRGGSASAGLGPSPFGPSRRTDFRVIVTNLPLSASWQDLKDHMRKAGDVTFTQVMKDGRGGNMGLVDFSTMDDMQTALRKLDQSEFRNPFDKTLIRVKEDR--GGG 209

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A7R9YPW8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YPW8_9CHLO)

HSP 1 Score: 201 bits (511), Expect = 1.020e-58
Identity = 126/219 (57.53%), Postives = 148/219 (67.58%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGM-GGGGFGGXXXXXXXXXXXGFGGM----------RGGAGAQM--TEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGG---IVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRA-VGGGRDSR 202
            M++IY+GNLP D+ E++++D+FYKFGRIV IDLKTP RPPAF FVTF+D RDAE+A RARDG +  G RLRVEIS G R   FG  GGGGF G  XXXXXXXXX               R     Q   T +RVIVTGLPPS SWQDLKDHMR+AG+ T+T V   G G   +V +  RDDME ALRKLD ++FRNPF+ + I V   R  VGGG   R
Sbjct:    1 MSKIYVGNLPGDIREREVEDLFYKFGRIVSIDLKTPPRPPAFSFVTFEDPRDAEDAARARDGMEYAGQRLRVEISHGGRATNFGRAGGGGFDGGRXXXXXXXXXXXXXXXXXXXXXXXXRASQPIQSRGTGYRVIVTGLPPSCSWQDLKDHMRRAGDVTFTQVVRDGRGMVGLVDYAHRDDMEAALRKLDDTEFRNPFDTTFIRVKEDRGDVGGGGXGR 219

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BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Match: A0A7S0I1L9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I1L9_9CRYP)

HSP 1 Score: 198 bits (504), Expect = 4.050e-58
Identity = 102/200 (51.00%), Postives = 135/200 (67.50%), Query Frame = 0

Query:    1 MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDARDAEEAVRARDGYDMDGSRLRVEISRGRR-DQGFGMGGGGFGGXXXXXXXXXXXGFGGMRGGAGA------QMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHR 193
            MARIY+GNLP+D+ E+D+DD+FYK+GRI DI++KTP+RPPAF FV F +  DAE+AVR RDG   +G+RLRVE+SRG     G+   GGG                    GGAG       + +++RVI++GLP SASWQDLKD+ R+AGE  YTDVD +GGGIV F   DD +YA++K D ++F NPF++  I V+  R
Sbjct:    1 MARIYVGNLPLDIRERDVDDLFYKYGRIRDIEVKTPSRPPAFAFVEFDNLYDAEDAVRGRDGVMFEGARLRVEMSRGTAATYGYDKRGGG--------------------GGAGKAPPRNLRRSDYRVIISGLPKSASWQDLKDYFRQAGEIVYTDVDRQGGGIVEFANEDDRDYAIKKFDDTEFSNPFDRGYIRVMKPR 180

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig478.11845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LB97_ECTSI	7.050e-115	85.58	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YQ88_9STRA	1.000e-82	69.35	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CC30_9STRA	6.470e-82	62.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LPT5_ECTSI	7.630e-73	59.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KN34_9PHAE	3.060e-66	56.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2B3Q3_9STRA	1.600e-63	57.75	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S0RPW5_9CHLO	1.460e-59	54.55	Hypothetical protein (Fragment) n=1 Tax=Chlamydomo...	[more]
A0A699ZIZ3_HAELA	2.730e-59	57.08	Uncharacterized protein (Fragment) n=2 Tax=Haemato...	[more]
A0A7R9YPW8_9CHLO	1.020e-58	57.53	Hypothetical protein n=1 Tax=Chlamydomonas euryale...	[more]
A0A7S0I1L9_9CRYP	4.050e-58	51.00	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..73 e-value: 6.7E-21 score: 85.4 coord: 120..188 e-value: 9.6E-8 score: 41.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 121..180 e-value: 2.3E-9 score: 36.9 coord: 4..71 e-value: 1.4E-17 score: 63.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 119..194 score: 10.241
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..77 score: 18.103
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..111 e-value: 1.0E-23 score: 85.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 118..193 e-value: 5.2E-22 score: 79.6
None	No IPR available	PANTHER	PTHR23147:SF140		coord: 3..248
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 3..248
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig478	contig	H-paniculata_contig478:28118..33672 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig478.11845.1	mRNA_H-paniculata_contig478.11845.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig478 28035..36522 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig478.11845.1 ID=prot_H-paniculata_contig478.11845.1|Name=mRNA_H-paniculata_contig478.11845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=358bp
MARIYIGNLPMDVTEKDIDDVFYKFGRIVDIDLKTPARPPAFGFVTFQDA
RDAEEAVRARDGYDMDGSRLRVEISRGRRDQGFGMGGGGFGGRMGMGMGM
GRGGFGGMRGGAGAQMTEFRVIVTGLPPSASWQDLKDHMRKAGEPTYTDV
DHKGGGIVHFRTRDDMEYALRKLDGSDFRNPFEKSRISVLPHRAVGGGRD
SRSRSRSPPKRRRARSPSSSRSRSRSAHRPRRRARSMSRSPSRSRSPPAR
RRRSRSPSPSRSRSRSRGRDRGRDNRDDEPEKRERDRRSRSRSRSRSRSR
SPAEANGTSNGKDGHENGYDDHETSRGEDRMDADKDDADHSREAPDDGGS
EAVPAEA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf