prot_H-paniculata_contig4779.11841.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4779.11841.1
Unique Nameprot_H-paniculata_contig4779.11841.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length995
Homology
BLAST of mRNA_H-paniculata_contig4779.11841.1 vs. uniprot
Match: D7FJW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW9_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 7.090e-56
Identity = 110/229 (48.03%), Postives = 144/229 (62.88%), Query Frame = 0
Query:   82 FTKGQIVWVRGAFEVNEQTTSQEDEGEVWCPGLVCGSA-APPDPPAAVRGPEVASLSPT-LVVEVLGMEKAVFEVQTDMLQLFPGNGDNLETLRTAVAIGIEDPPDCMFLAVGQAVLACLKCGWDPKRGTNILQPAVCNDQNQGEGRVQRYSAEWGVNPARLIKLLQSSWDLMKPLSPEDEEAQHD--GS------------VGDWGHLRNTWKKLEEMWRSTGHGVSD 294
            + +GQ+VWVRGAF       + ED+ +VWCPG+VC +A +    PA   G + A  SP  LVV+V+G  K  F V TD L  FPG GDNLE  R +VA G+ +PPD M LAV QA+LACLKCGWDP RGTN+ +PA+CN+Q +G+ R+ +Y+  WGV+P RL +LL+ SW LMKP + + ++A  D  GS              +W HLR TW+KLE MWR       D
Sbjct:   76 YNEGQVVWVRGAFVAYMDGQAVEDD-DVWCPGVVCAAANSAASSPAEANGGDGAVASPGGLVVDVMGQSKVEFAVGTDNLTGFPGYGDNLEAFRHSVATGLGNPPDHMCLAVAQAILACLKCGWDPARGTNLFRPALCNEQREGDARLGKYATAWGVDPDRLEELLKYSWALMKPNAQKSKKADGDQAGSREEXXXXXXXXXXXEWDHLRATWRKLENMWRGAKSAAHD 303          
BLAST of mRNA_H-paniculata_contig4779.11841.1 vs. uniprot
Match: A0A6H5JPR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR6_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.880e-55
Identity = 115/231 (49.78%), Postives = 147/231 (63.64%), Query Frame = 0
Query:   80 EMFTKGQIVWVRGAFEVNEQTTSQEDEGEVWCPGLVCG---SAAPPDPPAAVRGPEVASLSPT-LVVEVLGMEKAVFEVQTDMLQLFPGNGDNLETLRTAVAIGIEDPPDCMFLAVGQAVLACLKCGWDPKRGTNILQPAVCNDQNQGEGRVQRYSAEWGVNPARLIKLLQSSWDLMKPLSPE------------DEEAQHDGSVGDWGHLRNTWKKLEEMWRSTGHGVSD 294
            E + +GQ+VWVRGAF       + ED+ +VWCPG+VC    SAA    PA   G   A  SP  LVV+V+G  K  F V TD L  FPG GDNLE  R +VA G+ +PPD M LAV QA+LACLKCGWDP RGTN+L+PA+CNDQ +G+ R+ +Y+A WGV+P RL +LL+ SW LMKP + +            +EE + +   G+W HLR TW+KLE MWR     V +
Sbjct:  234 ECYNEGQVVWVRGAFVAYMDGQAVEDD-DVWCPGVVCAADNSAA--SSPAETNGGYGAVASPGGLVVDVMGQSKVEFAVGTDNLTGFPGYGDNLEAFRHSVATGLGNPPDHMCLAVAQAILACLKCGWDPARGTNLLRPALCNDQREGDARLGKYAAAWGVDPDRLEELLKYSWALMKPNAQKSKRADGDQAGSREEEVEEEEGEGEWDHLRATWRKLENMWRGAKSAVQE 461          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4779.11841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJW9_ECTSI7.090e-5648.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPR6_9PHAE1.880e-5549.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4779contigH-paniculata_contig4779:1544..11756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4779.11841.1mRNA_H-paniculata_contig4779.11841.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4779 1431..12921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4779.11841.1 ID=prot_H-paniculata_contig4779.11841.1|Name=mRNA_H-paniculata_contig4779.11841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=995bp
MTKKDLVEKLREASESGALPKPGSVVFDDPADRPGKAPDSTSSSSGSNDG
SAVLPAPTTHGNPGMEAQNPRSETSEGVNEMFTKGQIVWVRGAFEVNEQT
TSQEDEGEVWCPGLVCGSAAPPDPPAAVRGPEVASLSPTLVVEVLGMEKA
VFEVQTDMLQLFPGNGDNLETLRTAVAIGIEDPPDCMFLAVGQAVLACLK
CGWDPKRGTNILQPAVCNDQNQGEGRVQRYSAEWGVNPARLIKLLQSSWD
LMKPLSPEDEEAQHDGSVGDWGHLRNTWKKLEEMWRSTGHGVSDDDSGGG
GGGGRADGKPSNGQQVEGGRGEVSQRDGPAARSDENAAVNSRRSDGDGGL
RQQGTTAPERGQREMYIGEGMQSAGREEASTGGPTSSEGASDVAPPPRGV
QQPADVVTAAAGVVSSAAAVTTAPMAAKESRVAASSSGMNTRREGGGDGG
GDGVQRVAKQSELKEVSNAGSDGSETRRDGTVSQSHATAAAASPAAVTST
APAVVTTPAADLPSKREKPPTTGEVVVPAKQDSATPIATVAGGPRGSQSH
LGDDVPLKTMTRVTGKTVAPALRQDCEMPDTAAAATKAAAARSDGEHQPA
STGTVVSEAGCKPGSIRARQQGAKLECALREKQQEAVATEVVTSSAADNV
GDGAREKSTSGDGGGNGNAVIRRAGLSEEDPLVVVDDKSRSAGVAAGLPS
VIDGDKDRGGKKEEEKEELVGESRTIGHARKRARIEGYTKSGTSGAEACE
APTGGNQSVGNRVQDEPVRASGVASVATDGAVGTATDRVKMAAKPGSFNQ
GYPKSSAAVPVKRDLMTDAPAVVENAEVVAGGERAPATTATGSRSTTGNI
GPARAVTPSTGSSVVKPSLKRDRSSFPGSVQAGGDTMKNSLRRRSVVSGE
TIVATAKRPHPESSASSPGISAAAKASSIGGESSVASGKSSERSSGEATL
PAKSSDDPIRGRVFDAPPVYAREDFVDQADRSRSPGQRAAPRSQ*
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