prot_H-paniculata_contig47773.11838.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47773.11838.1
Unique Nameprot_H-paniculata_contig47773.11838.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: D7G3C2_ECTSI (F-box domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C2_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.130e-22
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    1 LNQEQLGECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEVLHELALPAPVYCLGAA 66
            L +EQLGEC HVL GHTER+TGVARL   R+A+SS DG+LRVW + +GE LH++ LP+P  CLGAA
Sbjct:   38 LEKEQLGECLHVLEGHTERITGVARLDGSRLATSSADGSLRVWDVSSGETLHDVLLPSPACCLGAA 103          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: A0A6H5KY61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY61_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.350e-21
Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    1 LNQEQLGECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEVLHELALPAPVYCLGAA 66
            L +EQLGEC HVL GHT+R+TGVARL   R+A+SS DG+LRVW + +GE LH++ LP+P  CLGAA
Sbjct:  261 LEKEQLGECLHVLEGHTQRITGVARLDGSRLATSSADGSLRVWDVSSGETLHDVLLPSPACCLGAA 326          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: A0A1E4F0N6_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4F0N6_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 8.020e-6
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0
Query:    7 GECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEVLHELALPAPVYCLGAA 66
            G C    +GHT++VT VA L ++   S+S+DGT+R+WSL +GE L       P   LG +
Sbjct:  953 GSCVRGFTGHTDQVTAVA-LSQETALSASLDGTVRLWSLASGECLEVYRFNEPALQLGVS 1011          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 n=2 Tax=Caenorhabditis TaxID=6237 RepID=SEL10_CAEBR)

HSP 1 Score: 50.8 bits (120), Expect = 1.080e-5
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    7 GECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEVLHEL 54
            G C H+LSGH   +T +   GR  VA+SS DG++++W +E G ++ +L
Sbjct:  495 GTCIHILSGHRSAITSLQWFGRGLVATSSDDGSVKLWDIERGVLIRDL 542          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: A0A6A6CQT5_9PEZI (Uncharacterized protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CQT5_9PEZI)

HSP 1 Score: 50.1 bits (118), Expect = 1.980e-5
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    9 CTHVLSGHTERVTGVA-RLGRDRVASSSVDGTLRVWSLETGEV---LHELA 55
            CT+  SGH E +TG+A R GR  V S S+DGT+RVWSLE GE+   L E+A
Sbjct:  294 CTY--SGHFEEITGLASRGGRREVVSVSIDGTVRVWSLERGEMEKYLEEVA 342          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: SEL10_CAEEL (F-box/WD repeat-containing protein sel-10 n=6 Tax=Caenorhabditis TaxID=6237 RepID=SEL10_CAEEL)

HSP 1 Score: 49.7 bits (117), Expect = 2.760e-5
Identity = 19/48 (39.58%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    7 GECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEVLHEL 54
            G C H+LSGH   +T +   GR+   +SS DGT+++W +E G ++ +L
Sbjct:  493 GTCVHMLSGHRSAITSLQWFGRNXXXTSSDDGTVKLWDIERGALIRDL 540          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: A0A4U0XHL1_9PEZI (F-box domain-containing protein n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4U0XHL1_9PEZI)

HSP 1 Score: 48.9 bits (115), Expect = 5.150e-5
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    7 GECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEV 50
            GE   V SGH E VTG+A +    V S S+DGT+R WSLETGE+
Sbjct:  442 GELVCVYSGHYEEVTGLALVRGWGVVSVSIDGTVRRWSLETGEM 485          
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Match: A0A8H3BVU0_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3BVU0_9AGAM)

HSP 1 Score: 48.1 bits (113), Expect = 9.620e-5
Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    7 GECTHVLSGHTERVTGVAR-LGRDRVASSSVDGTLRVWSLETGEVLHEL 54
            GEC   L GH+++V  V     R++  S ++DGT+R+WSL TG+ LH L
Sbjct:  297 GECKWTLDGHSQKVYSVVLDPQRNQAMSGTMDGTVRIWSLATGQALHTL 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47773.11838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G3C2_ECTSI1.130e-2265.15F-box domain containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KY61_9PHAE1.350e-2163.64Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A1E4F0N6_9BACT8.020e-641.67Non-specific serine/threonine protein kinase n=1 T... [more]
SEL10_CAEBR1.080e-541.67F-box/WD repeat-containing protein sel-10 n=2 Tax=... [more]
A0A6A6CQT5_9PEZI1.980e-556.86Uncharacterized protein n=1 Tax=Zasmidium cellare ... [more]
SEL10_CAEEL2.760e-539.58F-box/WD repeat-containing protein sel-10 n=6 Tax=... [more]
A0A4U0XHL1_9PEZI5.150e-556.82F-box domain-containing protein n=1 Tax=Friedmanni... [more]
A0A8H3BVU0_9AGAM9.620e-544.90Hypothetical protein n=1 Tax=Rhizoctonia solani Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 6..44
e-value: 7.9E-6
score: 35.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 7..44
e-value: 1.1E-6
score: 29.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 13..53
score: 12.079
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..65
e-value: 2.4E-13
score: 51.4
IPR033510PLAA/Doa1/Lub1PANTHERPTHR19849PHOSPHOLIPASE A-2-ACTIVATING PROTEINcoord: 7..63
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 13..53
score: 11.392
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 7..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47773contigH-paniculata_contig47773:1175..1372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47773.11838.1mRNA_H-paniculata_contig47773.11838.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47773 1175..1372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47773.11838.1 ID=prot_H-paniculata_contig47773.11838.1|Name=mRNA_H-paniculata_contig47773.11838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
LNQEQLGECTHVLSGHTERVTGVARLGRDRVASSSVDGTLRVWSLETGEV
LHELALPAPVYCLGAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR033510PLAA/Doa1/Lub1
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf