prot_H-paniculata_contig47757.11834.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47757.11834.1
Unique Nameprot_H-paniculata_contig47757.11834.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length112
Homology
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A2N9HVC4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HVC4_FAGSY)

HSP 1 Score: 56.2 bits (134), Expect = 7.920e-7
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   22 TNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHKM 112
            +N N T   G  W++DSGAS+H+T DL+N+ +   P  G + V +GNG  L +  +G   L  H+   +     V ++P +  NL S+HK+
Sbjct:  355 SNLNMTQGTGETWLTDSGASDHITADLNNL-NQPTPFKGPEQVSVGNGQNLPIQNIGNTQL--HTKLSLFKLRNVLHVPRIASNLLSVHKL 442          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A2N9F8M1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F8M1_FAGSY)

HSP 1 Score: 56.2 bits (134), Expect = 7.930e-7
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   22 TNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHKM 112
            +N N T   G  W++DSGAS+H+T DL+N+ +   P  G + V +GNG  L +  +G   L  H+   +     V ++P +  NL S+HK+
Sbjct:  355 SNLNMTQGTGETWLTDSGASDHITADLNNL-NQPTPFKGPEQVSVGNGQNLPIQNIGNTQL--HTKLSLFKLRNVLHVPRIASNLLSVHKL 442          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A6D2JUM8_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JUM8_9BRAS)

HSP 1 Score: 55.1 bits (131), Expect = 1.830e-6
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0
Query:   18 PVALTNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATL-EVSYLPELNFNLFSLHKM 112
            P A     PT N  N WV DSGA++H+T DLSN+  L +P  G + V + +G  L +   G   L    T   P TL +V Y+P+L  NL S++++
Sbjct:  100 PRANLASTPTYN-ANNWVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISVYRL 190          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A6D2KMT9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT9_9BRAS)

HSP 1 Score: 55.1 bits (131), Expect = 2.010e-6
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0
Query:   18 PVALTNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATL-EVSYLPELNFNLFSLHKM 112
            P A     PT N  N WV DSGA++H+T DLSN+  L +P  G + V + +G  L +   G   L    T   P TL +V Y+P+L  NL S++++
Sbjct:  318 PRANLASTPTYN-ANNWVMDSGATHHLTTDLSNL-SLHQPYLGGEEVTIADGTNLHISHTGSSQL---PTLSKPLTLTDVLYVPDLKKNLISVYRL 408          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A5E4GCQ9_PRUDU (PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GCQ9_PRUDU)

HSP 1 Score: 53.5 bits (127), Expect = 4.320e-6
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   32 NIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHK 111
            NIW++DSGASNH+T ++SN+     P  G + + +G+G +L +   G    I H++      L V + P++  NL S+HK
Sbjct:   23 NIWLADSGASNHVTLNMSNLCH-SSPYTGSETLRVGDGNSLPISNTGST--ILHTSNAKFHLLNVLHTPQVAHNLLSVHK 99          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A5B7C9B1_DAVIN (Retrotran_gag_3 domain-containing protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7C9B1_DAVIN)

HSP 1 Score: 53.9 bits (128), Expect = 4.640e-6
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 0
Query:   17 LPVALTNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLE-VSYLPELNFNLFSLH 110
            L       N   +N N+W++D+GA+NH+T D  N+  L     G+D + +GNGL L +  +G+  L    T D   TL  V ++P +  NL S+H
Sbjct:  349 LTAMAATHNQVSSNPNLWLTDTGATNHITTDFGNL-SLPAEYYGDDTIAIGNGLGLSISHIGQSSL---HTADHRFTLNNVLHVPFMASNLLSVH 439          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A5N5G4I9_9ROSA (Integrase catalytic domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5G4I9_9ROSA)

HSP 1 Score: 53.9 bits (128), Expect = 5.050e-6
Identity = 32/80 (40.00%), Postives = 44/80 (55.00%), Query Frame = 0
Query:   33 IWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHKM 112
            +W++DSGA+NHMT DLSN+  L  P      V   NG  L V  VG    + H+         V Y+P+L+ NL S+H+M
Sbjct:  300 LWLADSGATNHMTTDLSNL-TLASPYPTNKTVQTANGEGLRVSHVGST--VIHTPVHPIQLNSVLYVPKLSQNLLSVHRM 376          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A6P5SG96_PRUAV (uncharacterized protein LOC110758400 n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5SG96_PRUAV)

HSP 1 Score: 53.5 bits (127), Expect = 6.370e-6
Identity = 30/97 (30.93%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   16 GLPVALTNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHKM 112
            G+       +P++     W++DSGA+NHMT D+SN+  +  P    + +   NG  + +  +GK  LI H  T   A   V ++P+++ NL SL+++
Sbjct:  354 GITAMTAQVHPSMPQQEYWIADSGATNHMTADISNI-SVAAPYPTNETIATANGAGIHIAHIGKSSLITH--THSFALNSVLHVPQISANLLSLNQL 447          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A5N5J6G7_9ROSI (Uncharacterized protein n=1 Tax=Salix brachista TaxID=2182728 RepID=A0A5N5J6G7_9ROSI)

HSP 1 Score: 53.5 bits (127), Expect = 6.620e-6
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   19 VALTNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHK 111
            +A +N  PT      W+SDSGASNH+T DLSNM D      G+D V +GNG  L +   G   +   S+T   A   + + P +  NL S+++
Sbjct:  321 IASSNNQPTT-----WISDSGASNHITSDLSNM-DAHNEYHGKDHVDVGNGAGLTIANTGSSKITCGSSTF--ALKNILHCPSIAANLLSIYQ 405          
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Match: A0A2N9F7W8_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F7W8_FAGSY)

HSP 1 Score: 53.5 bits (127), Expect = 6.780e-6
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   22 TNQNPTINNGNIWVSDSGASNHMTYDLSNMYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLPELNFNLFSLHKM 112
            +N N T  N + W++DSGAS+H+T +L+N+  L  P  G + V +GNG  L +  +G   L  H+         V ++P +  NL S+HK+
Sbjct:   21 SNLNITQGNNDTWLTDSGASDHITANLNNLNQLI-PFKGPEQVSVGNGQNLPIQNIGNTQL--HTKLHHFRLRNVFHVPRIASNLLSVHKL 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47757.11834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2N9HVC4_FAGSY7.920e-735.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9F8M1_FAGSY7.930e-735.16Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6D2JUM8_9BRAS1.830e-638.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2KMT9_9BRAS2.010e-638.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E4GCQ9_PRUDU4.320e-636.25PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 R... [more]
A0A5B7C9B1_DAVIN4.640e-634.74Retrotran_gag_3 domain-containing protein n=1 Tax=... [more]
A0A5N5G4I9_9ROSA5.050e-640.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6P5SG96_PRUAV6.370e-630.93uncharacterized protein LOC110758400 n=1 Tax=Prunu... [more]
A0A5N5J6G7_9ROSI6.620e-637.63Uncharacterized protein n=1 Tax=Salix brachista Ta... [more]
A0A2N9F7W8_FAGSY6.780e-635.16Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47757contigH-paniculata_contig47757:1093..1428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47757.11834.1mRNA_H-paniculata_contig47757.11834.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47757 1093..1428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47757.11834.1 ID=prot_H-paniculata_contig47757.11834.1|Name=mRNA_H-paniculata_contig47757.11834.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
LIDVDKSDDTEDGEYGLPVALTNQNPTINNGNIWVSDSGASNHMTYDLSN
MYDLRKPVAGEDVVMLGNGLTLVVDLVGKLDLIFHSTTDVPATLEVSYLP
ELNFNLFSLHKM
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