mRNA_H-paniculata_contig47733.11831.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: A0A7S1T3E5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3E5_9CHLO) HSP 1 Score: 62.4 bits (150), Expect = 3.670e-11 Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 1 VMFQSQQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDE 150
V QRRKLDD+AW GVF+GY +SP++ ++NP + SRN++FDE
Sbjct: 42 VHVDKSQRRKLDDRAWKGVFVGYASESPAWLVYNPVTRRAVSSRNVVFDE 91
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: UPI0003DE8D8D (uncharacterized protein LOC102660714 n=1 Tax=Glycine max TaxID=3847 RepID=UPI0003DE8D8D) HSP 1 Score: 58.5 bits (140), Expect = 9.090e-9 Identity = 25/53 (47.17%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEE---DFVT 165
++R KLDDK+ +F+GYD S Y+++NP NK + +SR+++FDEE DF T
Sbjct: 163 ERREKLDDKSERFIFIGYDSISKGYKLYNPNNKKMVISRDVVFDEEEQWDFET 215
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: T1GX32_MEGSC (Uncharacterized protein n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GX32_MEGSC) HSP 1 Score: 55.8 bits (133), Expect = 9.680e-9 Identity = 25/57 (43.86%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 1 VMFQSQQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRN---IIFDEEDFV 162
V ++R+KLD+KAWTG+ +G EDS YRI +P K + +SRN + EDF+
Sbjct: 2 VQVPDEKRKKLDNKAWTGIIIGCSEDSKGYRIFDPCTKKICISRNEGVFYYKSEDFL 58
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: UPI00073A020C (uncharacterized protein LOC107057891 n=1 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A020C) HSP 1 Score: 55.5 bits (132), Expect = 5.180e-8 Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEEDF 159
Q+R+KLDDK +FLG + S +Y+++NP K + +SR+++FDE F
Sbjct: 31 QKRKKLDDKGEKCIFLGVSDQSKAYKLYNPNTKKILVSRDVVFDENQF 78
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: A0A540MM95_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MM95_MALBA) HSP 1 Score: 56.6 bits (135), Expect = 7.620e-8 Identity = 21/47 (44.68%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEED 156
++R KLDDK+ +F+GYD +S Y+++NP N+ + +SR++ FDEE+
Sbjct: 116 ERRAKLDDKSEKFIFIGYDSNSKGYKLYNPNNRKMVISRDVTFDEEE 162
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: A0A6A3BK46_HIBSY (Annexin 5 isoform 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BK46_HIBSY) HSP 1 Score: 56.6 bits (135), Expect = 7.770e-8 Identity = 20/46 (43.48%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEE 153
++R KLD+K + +F+GYD +S Y+++NP+NK + +SR+++F+EE
Sbjct: 1137 ERRTKLDEKRESFIFIGYDANSKGYKLYNPDNKKIVISRDVVFNEE 1182
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: A0A371E7M2_MUCPR (Uncharacterized protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371E7M2_MUCPR) HSP 1 Score: 54.7 bits (130), Expect = 9.130e-8 Identity = 22/47 (46.81%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 13 SQQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEE 153
+Q R KLD+++ VF+GYD DS Y+++NP N + +SR++ FDEE
Sbjct: 49 NQGRSKLDNRSMKHVFIGYDTDSKGYKLYNPNNGKIIISRDVEFDEE 95
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: A0A7S1SL50_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SL50_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 1.040e-7 Identity = 21/46 (45.65%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEE 153
+QRRKL +KA+ GV +GY D+P YR++NPE + + S +++F E+
Sbjct: 297 KQRRKLSEKAFRGVMVGYPPDAPGYRVYNPETRRITTSVHVVFQED 342
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: A0A6A2X2T8_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X2T8_HIBSY) HSP 1 Score: 56.2 bits (134), Expect = 1.040e-7 Identity = 21/46 (45.65%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEE 153
++R KLDDK+ + +F+GYD +S Y+++NP NK + +SR ++F+EE
Sbjct: 33 ERRTKLDDKSESFIFIGYDANSKIYKLYNPYNKKIMISRYVVFNEE 78
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Match: UPI0009047AD4 (uncharacterized protein LOC109237395 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009047AD4) HSP 1 Score: 55.5 bits (132), Expect = 1.850e-7 Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 16 QQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEE 153
++R KLDDK+ VF+GYD+ S Y+++NP+N V +SR++ FDE+
Sbjct: 182 EKRSKLDDKSERYVFIGYDQSSKGYKLYNPKNGKVTISRDVEFDED 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47733.11831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47733.11831.1 >prot_H-paniculata_contig47733.11831.1 ID=prot_H-paniculata_contig47733.11831.1|Name=mRNA_H-paniculata_contig47733.11831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp MFQSQQRRKLDDKAWTGVFLGYDEDSPSYRIHNPENKSVQLSRNIIFDEEback to top mRNA from alignment at H-paniculata_contig47733:97..276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47733.11831.1 ID=mRNA_H-paniculata_contig47733.11831.1|Name=mRNA_H-paniculata_contig47733.11831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=180bp|location=Sequence derived from alignment at H-paniculata_contig47733:97..276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47733:97..276+ >mRNA_H-paniculata_contig47733.11831.1 ID=mRNA_H-paniculata_contig47733.11831.1|Name=mRNA_H-paniculata_contig47733.11831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=354bp|location=Sequence derived from alignment at H-paniculata_contig47733:97..276+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |