mRNA_H-paniculata_contig4772.11828.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: D7FVC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI) HSP 1 Score: 262 bits (669), Expect = 4.120e-72 Identity = 123/146 (84.25%), Postives = 136/146 (93.15%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
QA AMA GLS+IVP+KVLRLFTA QLEIAVAG+PEFD+ W++HTEYKGYRP+D TV+FFWKVIESMS EDQSGFVRFAWGRSRLPPK +WRVNMKLLR N SE+SLPVSHTCFFSIELPPYS+EERMR+GLLTA+HFGMGGILNA
Sbjct: 6456 QAMAMAAGLSEIVPIKVLRLFTAAQLEIAVAGEPEFDIPCWKEHTEYKGYRPDDDTVQFFWKVIESMSPEDQSGFVRFAWGRSRLPPKPFWRVNMKLLRSNMSEESLPVSHTCFFSIELPPYSTEERMRKGLLTAVHFGMGGILNA 6601
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A836C961_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C961_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.330e-53 Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
Q AAMA GL DIVP+ LRLFT QLE+AVAG P FD+ WR HTEYKG+ + TV FW+V+ S++ ++QSGFVRFAWGRSRLPP ++W NMKL R + +LPVSHTCFFS+ELP Y +E+ MR GLLTAIHFG GILNA
Sbjct: 282 QIAAMARGLGDIVPLSALRLFTWDQLEVAVAGDPAFDLDLWRAHTEYKGFDADGETVALFWRVLGSLTPQEQSGFVRFAWGRSRLPPLAHWTTNMKLSNRGNA--ALPVSHTCFFSVELPDYKTEDEMRRGLLTAIHFGACGILNA 425
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S1G912_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G912_9STRA) HSP 1 Score: 181 bits (460), Expect = 7.130e-49 Identity = 81/147 (55.10%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 352 PQAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
PQ AAM G++ +VP + L+L T ++LE+AVAG+PE +VA RKHTEY GY +D ++ FW+V+E + E+++ ++RF WGRSRLP + W MK+ RR+ S++SLP SHTCFFSIELPPY S++ MR LL A+HFG+GGILNA
Sbjct: 175 PQVAAMLRGIAAVVPARALKLMTWQELEVAVAGRPEINVALLRKHTEYDGYHRDDPVIQRFWRVMEEFTNEERTLYLRFVWGRSRLPIQRRWPKKMKITRRSASDESLPHSHTCFFSIELPPYGSDQVMRRRLLAAVHFGLGGILNA 321
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: W7TSE1_9STRA (Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSE1_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.120e-45 Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAI 762
Q AMA GL +V L L T ++LE V G P FD+AFW+ HT Y GY +D T++ FWKV+ES S E+QSGFVRFAWGRSRLPPK+ W NM++ RRN EDSLP SHTCFFSIELPPY SE MR+GLLTAI
Sbjct: 1453 QVGAMARGLYAVVARDTLLLLTWQELETLVCGSPTFDMAFWKAHTTYAGYSKDDLTIQLFWKVLESFSHEEQSGFVRFAWGRSRLPPKNAWYKNMQISRRNAGEDSLPASHTCFFSIELPPYQSEAAMRKGLLTAI 1588
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S3GZC0_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZC0_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.660e-43 Identity = 77/143 (53.85%), Postives = 101/143 (70.63%), Query Frame = 1
Query: 361 AAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
AAMA G+ +++P + L LF++ QLE V G P FD+ W+K T+ G D TV FWKV+E+++ ++ SGFVRFAWGRSRLP + M+L T+ +LPVSHTCFFS+ELP Y +EE MR GLLTAIH+G+GGILN
Sbjct: 7 AAMARGMQEVIPSRALWLFSSSQLETLVCGNPVFDMDMWKKKTDSTGVS--DKTVALFWKVMETLTQKELSGFVRFAWGRSRLPAAKEFTTKMRLTNGGTA--TLPVSHTCFFSVELPEYPTEEAMRHGLLTAIHYGVGGILN 145
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S2D699_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D699_9STRA) HSP 1 Score: 158 bits (399), Expect = 7.660e-41 Identity = 74/147 (50.34%), Postives = 107/147 (72.79%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSY-WRVNMKLLRRN-TSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
Q AAM GL +VP+++L+LFT +Q E VAGKP+ D+ ++HTEY+G+RP D + +FW+ +E ++ +++S F+RF WGRSRLP K W K+ R+ +++LPV+HTCFFSIELP YS+EE ++ LLTAI +G+GGILN
Sbjct: 113 QVAAMRRGLGCVVPLRLLQLFTWQQAEELVAGKPDVDLEDLKRHTEYRGFRPTDPAIVYFWRAMEGLNMDERSQFIRFVWGRSRLPLKGRPWPQTFKIQRQGGVGDETLPVTHTCFFSIELPDYSTEEILKTRLLTAITYGVGGILN 259
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S2SQP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQP9_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.850e-40 Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSY-WRVNMKLLRRN--TSEDS-LPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
Q AAM GL+ +VP+++L+LFT +Q+E VAGKPE D+ ++HTEY+G+ P + FFWK +E++S ++S F+RF WGRSRLP K W K+ R + T+ D+ LP +HTCFFSIELP YSSEE + LLTAI++G+GGILN
Sbjct: 28 QLAAMRRGLACVVPLRILQLFTWQQVEELVAGKPEVDLDDLKRHTEYRGFPPNAPAIRFFWKAMENLSHVERSQFIRFVWGRSRLPLKGRPWPQTFKIQRMDGVTNPDATLPETHTCFFSIELPAYSSEEICNQRLLTAINYGVGGILN 176
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A662WQB5_9STRA (HECT domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQB5_9STRA) HSP 1 Score: 153 bits (386), Expect = 4.270e-40 Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSE--DSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
Q AAMA G + + P +VL L T ++LE+ G P+ D+A W++HT Y GY +D TV FW+V+ S E ++ FVRFAWGRSRLP + W KL ++ + SLPV+HTCFFS+ELPPY++ E MR LL I FG+GGIL A
Sbjct: 26 QVAAMARGFATLFPRRVLTLLTWQELELLTCGSPKIDLALWQRHTRYDGYAEDDPTVRLFWEVLGDFSDEQRTDFVRFAWGRSRLP-RGKWPQPFKLSKKGGRDATHSLPVAHTCFFSVELPPYTTREIMRSRLLATITFGLGGILMA 172
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A6U4CS48_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CS48_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.210e-37 Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 271 LFSRTLFH*PVLACALPLSLDLCCP*WPQAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTS------EDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
LF+R L H V + LPL ++ A G ++P++ L L T + E+ V G+ FD+A+WR HT Y GY D ++ FW V+ + E +S FVRFAWGRSRLPP+ W +M++ R N S + SLP+SHTCFFS+ELPPY+S E MR GL I +G+GG+LN
Sbjct: 424 LFARAL-HGAVFSEVLPLIDEV-----------ARGFDMVLPLRALALHTCAEAEVVVCGRASFDMAWWRTHTNYAGYEDTDEVIQNFWCVVNAWGDEQRSNFVRFAWGRSRLPPRESWYKDMQISRSNISGGAEAIDSSLPMSHTCFFSVELPPYTSIEAMRRGLNICITYGLGGVLN 590
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A418G151_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418G151_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.230e-36 Identity = 74/148 (50.00%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSED--SLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
Q AM GLS + P++VL L +++E+ G P+ D+A W++HT Y GY +D TV FW V+ S S E +S FVRFAWGRSRLP + W KL ++ + SLPV+HTCFFS+ELPPY+++ERM + LL I+FG+GGIL A
Sbjct: 427 QVTAMLRGLSTLFPVRVLTLLNWQEMEMLSCGTPKIDIALWKQHTRYDGYTDQDDTVRLFWDVMASFSDEQRSDFVRFAWGRSRLP-RGKWPQPFKLTKKAGRDSVLSLPVAHTCFFSVELPPYTTKERMHDMLLATINFGLGGILIA 573 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4772.11828.1 >prot_H-paniculata_contig4772.11828.1 ID=prot_H-paniculata_contig4772.11828.1|Name=mRNA_H-paniculata_contig4772.11828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp MADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDback to top mRNA from alignment at H-paniculata_contig4772:5928..8423- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4772.11828.1 ID=mRNA_H-paniculata_contig4772.11828.1|Name=mRNA_H-paniculata_contig4772.11828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig4772:5928..8423- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4772:5928..8423- >mRNA_H-paniculata_contig4772.11828.1 ID=mRNA_H-paniculata_contig4772.11828.1|Name=mRNA_H-paniculata_contig4772.11828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig4772:5928..8423- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |